RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 SORT1Q99523 831 aa4.68□□□□□ -1.66
LINC00550-201ENST00000629293 TEX101Q9BY14 249 aa4.68□□□□□ -1.66
LINC00550-201ENST00000629293 OR2AG1Q9H205 316 aa4.68□□□□□ -1.66
LINC00550-201ENST00000629293 DCLRE1BQ9H816 532 aa4.68□□□□□ -1.66
LINC00550-201ENST00000629293 PLEKHB1Q9UF11 243 aaPredicted RBP4.68□□□□□ -1.66
LINC00550-201ENST00000629293 CROTQ9UKG9 612 aa4.68□□□□□ -1.66
LINC00550-201ENST00000629293 C1orf232A0A0U1RR37 186 aa4.68□□□□□ -1.66
LINC00550-201ENST00000629293 IQCJ-SCHIP1C9J366 451 aaPredicted RBP4.68□□□□□ -1.66
LINC00550-201ENST00000629293 FAM47E-STBD1D6RA91 191 aa4.68□□□□□ -1.66
LINC00550-201ENST00000629293 LIN7AO14910 233 aaPredicted RBP4.68□□□□□ -1.66
LINC00550-201ENST00000629293 KDM1AO60341 852 aa4.68□□□□□ -1.66
LINC00550-201ENST00000629293 NTRK1P04629 796 aa4.68□□□□□ -1.66
LINC00550-201ENST00000629293 PAMP19021 973 aa4.68□□□□□ -1.66
LINC00550-201ENST00000629293 CD53P19397 219 aa4.68□□□□□ -1.66
LINC00550-201ENST00000629293 GP5P40197 560 aa4.68□□□□□ -1.66
LINC00550-201ENST00000629293 CCL11P51671 97 aa4.68□□□□□ -1.66
LINC00550-201ENST00000629293 SESN2P58004 480 aaPredicted RBP4.68□□□□□ -1.66
LINC00550-201ENST00000629293 DSC2Q02487 901 aa4.68□□□□□ -1.66
LINC00550-201ENST00000629293 GALNT2Q10471 571 aa4.68□□□□□ -1.66
LINC00550-201ENST00000629293 AP1B1Q10567 949 aa4.68□□□□□ -1.66
LINC00550-201ENST00000629293 KLRB1Q12918 225 aa4.68□□□□□ -1.66
LINC00550-201ENST00000629293 STX3Q13277 289 aa4.68□□□□□ -1.66
LINC00550-201ENST00000629293 TRA2AQ13595 282 aaKnown RBP eCLIP4.68□□□□□ -1.66
LINC00550-201ENST00000629293 KHDC1Q4VXA5 237 aaKnown RBP4.68□□□□□ -1.66
LINC00550-201ENST00000629293 PYCR3Q53H96 274 aa4.68□□□□□ -1.66
LINC00550-201ENST00000629293 FASTKD1Q53R41 847 aaKnown RBP4.68□□□□□ -1.66
LINC00550-201ENST00000629293 ACSBG2Q5FVE4 666 aa4.68□□□□□ -1.66
LINC00550-201ENST00000629293 FAM199XQ6PEV8 388 aaPredicted RBP4.68□□□□□ -1.66
LINC00550-201ENST00000629293 MAVSQ7Z434 540 aa4.68□□□□□ -1.66
LINC00550-201ENST00000629293 CRLF3Q8IUI8 442 aa4.68□□□□□ -1.66
LINC00550-201ENST00000629293 PHYKPLQ8IUZ5 450 aa4.68□□□□□ -1.66
LINC00550-201ENST00000629293 PGBD5Q8N414 524 aa4.68□□□□□ -1.66
LINC00550-201ENST00000629293 SFRP1Q8N474 314 aa4.68□□□□□ -1.66
LINC00550-201ENST00000629293 TEX9Q8N6V9 391 aa4.68□□□□□ -1.66
LINC00550-201ENST00000629293 CCNYQ8ND76 341 aa4.68□□□□□ -1.66
LINC00550-201ENST00000629293 OR10H5Q8NGA6 315 aa4.68□□□□□ -1.66
LINC00550-201ENST00000629293 TSPEARQ8WU66 669 aa4.68□□□□□ -1.66
LINC00550-201ENST00000629293 CDKL2Q92772 493 aa4.68□□□□□ -1.66
LINC00550-201ENST00000629293 SCRN2Q96FV2 425 aa4.68□□□□□ -1.66
LINC00550-201ENST00000629293 CERS2Q96G23 380 aa4.68□□□□□ -1.66
LINC00550-201ENST00000629293 CPNE1Q99829 537 aa4.68□□□□□ -1.66
LINC00550-201ENST00000629293 CEP41Q9BYV8 373 aa4.68□□□□□ -1.66
LINC00550-201ENST00000629293 BRD8Q9H0E9 1235 aa4.68□□□□□ -1.66
LINC00550-201ENST00000629293 GBA3Q9H227 469 aa4.68□□□□□ -1.66
LINC00550-201ENST00000629293 RETREG1Q9H6L5 497 aa4.68□□□□□ -1.66
LINC00550-201ENST00000629293 ERVK13-1Q9NX77 482 aa4.68□□□□□ -1.66
LINC00550-201ENST00000629293 ARMCX1Q9P291 453 aa4.68□□□□□ -1.66
LINC00550-201ENST00000629293 PIKFYVEQ9Y2I7 2098 aa4.68□□□□□ -1.66
LINC00550-201ENST00000629293 ABCA4P78363 2273 aa4.68□□□□□ -1.66
LINC00550-201ENST00000629293 ZCWPW2A0A1B0GU75 182 aa4.68□□□□□ -1.66
LINC00550-201ENST00000629293 OR52A4PA6NMU1 304 aa4.68□□□□□ -1.66
LINC00550-201ENST00000629293 ERI2A8K979 691 aaKnown RBP4.68□□□□□ -1.66
LINC00550-201ENST00000629293 F5H423 210 aaPredicted RBP4.68□□□□□ -1.66
LINC00550-201ENST00000629293 ZNF195O14628 629 aa4.68□□□□□ -1.66
LINC00550-201ENST00000629293 GYG2O15488 501 aa4.68□□□□□ -1.66
LINC00550-201ENST00000629293 ITM2AO43736 263 aa4.68□□□□□ -1.66
LINC00550-201ENST00000629293 PGLSO95336 258 aa4.68□□□□□ -1.66
LINC00550-201ENST00000629293 CBX7O95931 251 aa4.68□□□□□ -1.66
LINC00550-201ENST00000629293 VIPP01282 170 aa4.68□□□□□ -1.66
LINC00550-201ENST00000629293 SERPINE1P05121 402 aa4.68□□□□□ -1.66
LINC00550-201ENST00000629293 SERPINA6P08185 405 aa4.68□□□□□ -1.66
LINC00550-201ENST00000629293 RPSAP08865 295 aaKnown RBP4.68□□□□□ -1.66
LINC00550-201ENST00000629293 FURINP09958 794 aa4.68□□□□□ -1.66
LINC00550-201ENST00000629293 NEFHP12036 1026 aa4.68□□□□□ -1.66
LINC00550-201ENST00000629293 MAP4P27816 1152 aaKnown RBP4.68□□□□□ -1.66
LINC00550-201ENST00000629293 ARRB2P32121 409 aa4.68□□□□□ -1.66
LINC00550-201ENST00000629293 BCL6P41182 706 aa4.68□□□□□ -1.66
LINC00550-201ENST00000629293 ZNF135P52742 658 aaPredicted RBP4.68□□□□□ -1.66
LINC00550-201ENST00000629293 AQP5P55064 265 aa4.68□□□□□ -1.66
LINC00550-201ENST00000629293 MC1RQ01726 317 aa4.68□□□□□ -1.66
LINC00550-201ENST00000629293 NSUN2Q08J23 767 aaKnown RBP eCLIP4.68□□□□□ -1.66
LINC00550-201ENST00000629293 PEX6Q13608 980 aa4.68□□□□□ -1.66
LINC00550-201ENST00000629293 KCNAB1Q14722 419 aa4.68□□□□□ -1.66
LINC00550-201ENST00000629293 FAM69BQ5VUD6 431 aa4.68□□□□□ -1.66
LINC00550-201ENST00000629293 ZNF385CQ66K41 422 aaPredicted RBP4.68□□□□□ -1.66
LINC00550-201ENST00000629293 CPZQ66K79 652 aa4.68□□□□□ -1.66
LINC00550-201ENST00000629293 ZCCHC23Q6ZST2 131 aa4.68□□□□□ -1.66
LINC00550-201ENST00000629293 TSPYL5Q86VY4 417 aaPredicted RBP4.68□□□□□ -1.66
LINC00550-201ENST00000629293 KRT78Q8N1N4 520 aa4.68□□□□□ -1.66
LINC00550-201ENST00000629293 ESX1Q8N693 406 aa4.68□□□□□ -1.66
LINC00550-201ENST00000629293 VPS37AQ8NEZ2 397 aa4.68□□□□□ -1.66
LINC00550-201ENST00000629293 HCAR2Q8TDS4 363 aa4.68□□□□□ -1.66
LINC00550-201ENST00000629293 TEFMQ96QE5 360 aaKnown RBP4.68□□□□□ -1.66
LINC00550-201ENST00000629293 RBBP8Q99708 897 aa4.68□□□□□ -1.66
LINC00550-201ENST00000629293 FERMT1Q9BQL6 677 aa4.68□□□□□ -1.66
LINC00550-201ENST00000629293 MLPHQ9BV36 600 aaPredicted RBP4.68□□□□□ -1.66
LINC00550-201ENST00000629293 DDA1Q9BW61 102 aa4.68□□□□□ -1.66
LINC00550-201ENST00000629293 SPATA16Q9BXB7 569 aa4.68□□□□□ -1.66
LINC00550-201ENST00000629293 BATF3Q9NR55 127 aa4.68□□□□□ -1.66
LINC00550-201ENST00000629293 CPNE7Q9UBL6 633 aa4.68□□□□□ -1.66
LINC00550-201ENST00000629293 DCDC2Q9UHG0 476 aa4.68□□□□□ -1.66
LINC00550-201ENST00000629293 SLC17A4Q9Y2C5 497 aa4.68□□□□□ -1.66
LINC00550-201ENST00000629293 ARGFXA6NJG6 315 aa4.67□□□□□ -1.66
LINC00550-201ENST00000629293 B3GALT2O43825 422 aa4.67□□□□□ -1.66
LINC00550-201ENST00000629293 SOCS5O75159 536 aa4.67□□□□□ -1.66
LINC00550-201ENST00000629293 USP1O94782 785 aa4.67□□□□□ -1.66
LINC00550-201ENST00000629293 SLC25A14O95258 325 aaPredicted RBP4.67□□□□□ -1.66
LINC00550-201ENST00000629293 POLBP06746 335 aa4.67□□□□□ -1.66
LINC00550-201ENST00000629293 LEPRP48357 1165 aaKnown RBP4.67□□□□□ -1.66
LINC00550-201ENST00000629293 PTDSS1P48651 473 aaKnown RBP4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms