RNA–Protein interactions for RNA: ENST00000628018.2

CAPNS1-215, Transcript of calpain small subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAPNS1, Length 1,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-215ENST00000628018 AP1M2Q9Y6Q5 423 aa23.83■■□□□ 1.41
CAPNS1-215ENST00000628018 A0A0C4DFX4 3053 aa23.82■■□□□ 1.4
CAPNS1-215ENST00000628018 ZW10O43264 779 aa23.82■■□□□ 1.4
CAPNS1-215ENST00000628018 SEMA3DO95025 777 aa23.82■■□□□ 1.4
CAPNS1-215ENST00000628018 CFIP05156 583 aa23.82■■□□□ 1.4
CAPNS1-215ENST00000628018 TYRP1P17643 537 aa23.82■■□□□ 1.4
CAPNS1-215ENST00000628018 MAGP20916 626 aa23.82■■□□□ 1.4
CAPNS1-215ENST00000628018 NUDT2P50583 147 aa23.82■■□□□ 1.4
CAPNS1-215ENST00000628018 BIRC2Q13490 618 aa23.82■■□□□ 1.4
CAPNS1-215ENST00000628018 ZIC1Q15915 447 aa23.82■■□□□ 1.4
CAPNS1-215ENST00000628018 HLA-BQ31612 363 aa23.82■■□□□ 1.4
CAPNS1-215ENST00000628018 VPS26BQ4G0F5 336 aa23.82■■□□□ 1.4
CAPNS1-215ENST00000628018 KHDRBS2Q5VWX1 349 aaKnown RBP23.82■■□□□ 1.4
CAPNS1-215ENST00000628018 KLHL35Q6PF15 583 aa23.82■■□□□ 1.4
CAPNS1-215ENST00000628018 ARL10Q8N8L6 244 aa23.82■■□□□ 1.4
CAPNS1-215ENST00000628018 MFSD9Q8NBP5 474 aa23.82■■□□□ 1.4
CAPNS1-215ENST00000628018 GLB1L3Q8NCI6 653 aaPredicted RBP23.82■■□□□ 1.4
CAPNS1-215ENST00000628018 UTP4Q969X6 686 aaKnown RBP23.82■■□□□ 1.4
CAPNS1-215ENST00000628018 ZUFSPQ96AP4 578 aa23.82■■□□□ 1.4
CAPNS1-215ENST00000628018 EBPLQ9BY08 206 aa23.82■■□□□ 1.4
CAPNS1-215ENST00000628018 EVA1BQ9NVM1 165 aa23.82■■□□□ 1.4
CAPNS1-215ENST00000628018 PCDHGA4Q9Y5G9 962 aa23.82■■□□□ 1.4
CAPNS1-215ENST00000628018 PI4KAP42356 2102 aa23.81■■□□□ 1.4
CAPNS1-215ENST00000628018 A0A0J9YY10 115 aa23.81■■□□□ 1.4
CAPNS1-215ENST00000628018 A0A1W2PP18 115 aa23.81■■□□□ 1.4
CAPNS1-215ENST00000628018 SAP18O00422 153 aaKnown RBP23.81■■□□□ 1.4
CAPNS1-215ENST00000628018 TIA1P31483 386 aaKnown RBP eCLIP23.81■■□□□ 1.4
CAPNS1-215ENST00000628018 LSSP48449 732 aa23.81■■□□□ 1.4
CAPNS1-215ENST00000628018 MMEL1Q495T6 779 aa23.81■■□□□ 1.4
CAPNS1-215ENST00000628018 COQ5Q5HYK3 327 aa23.81■■□□□ 1.4
CAPNS1-215ENST00000628018 FCRL6Q6DN72 434 aa23.81■■□□□ 1.4
CAPNS1-215ENST00000628018 ARMC6Q6NXE6 501 aa23.81■■□□□ 1.4
CAPNS1-215ENST00000628018 FIGLAQ6QHK4 219 aa23.81■■□□□ 1.4
CAPNS1-215ENST00000628018 PRR23BQ6ZRT6 265 aa23.81■■□□□ 1.4
CAPNS1-215ENST00000628018 COMMD6Q7Z4G1 85 aa23.81■■□□□ 1.4
CAPNS1-215ENST00000628018 ZNF438Q7Z4V0 828 aa23.81■■□□□ 1.4
CAPNS1-215ENST00000628018 TMEM74Q96NL1 305 aa23.81■■□□□ 1.4
CAPNS1-215ENST00000628018 TSSK3Q96PN8 268 aa23.81■■□□□ 1.4
CAPNS1-215ENST00000628018 POMT2Q9UKY4 750 aa23.81■■□□□ 1.4
CAPNS1-215ENST00000628018 NDUFAF1Q9Y375 327 aa23.81■■□□□ 1.4
CAPNS1-215ENST00000628018 TTC28Q96AY4 2481 aa23.8■■□□□ 1.4
CAPNS1-215ENST00000628018 DYTNA2CJ06 578 aa23.8■■□□□ 1.4
CAPNS1-215ENST00000628018 DFNA5O60443 496 aa23.8■■□□□ 1.4
CAPNS1-215ENST00000628018 KRT16P08779 473 aa23.8■■□□□ 1.4
CAPNS1-215ENST00000628018 PPP1CAP62136 330 aa23.8■■□□□ 1.4
CAPNS1-215ENST00000628018 RPS15AP62244 130 aaKnown RBP23.8■■□□□ 1.4
CAPNS1-215ENST00000628018 RELAQ04206 551 aa23.8■■□□□ 1.4
CAPNS1-215ENST00000628018 FBXO42Q6P3S6 717 aa23.8■■□□□ 1.4
CAPNS1-215ENST00000628018 SLC35F3Q8IY50 421 aa23.8■■□□□ 1.4
CAPNS1-215ENST00000628018 DSELQ8IZU8 1212 aa23.8■■□□□ 1.4
CAPNS1-215ENST00000628018 KRTCAP2Q8N6L1 136 aa23.8■■□□□ 1.4
CAPNS1-215ENST00000628018 CLHC1Q8NHS4 586 aa23.8■■□□□ 1.4
CAPNS1-215ENST00000628018 SAP25Q8TEE9 199 aa23.8■■□□□ 1.4
CAPNS1-215ENST00000628018 EGLN2Q96KS0 407 aa23.8■■□□□ 1.4
CAPNS1-215ENST00000628018 PPM1MQ96MI6 270 aa23.8■■□□□ 1.4
CAPNS1-215ENST00000628018 F2RL3Q96RI0 385 aa23.8■■□□□ 1.4
CAPNS1-215ENST00000628018 ZBTB18Q99592 522 aa23.8■■□□□ 1.4
CAPNS1-215ENST00000628018 CLMPQ9H6B4 373 aa23.8■■□□□ 1.4
CAPNS1-215ENST00000628018 SYNPO2LQ9H987 977 aa23.8■■□□□ 1.4
CAPNS1-215ENST00000628018 AHSPQ9NZD4 102 aa23.8■■□□□ 1.4
CAPNS1-215ENST00000628018 RNF215Q9Y6U7 377 aa23.8■■□□□ 1.4
CAPNS1-215ENST00000628018 CCDC154A6NI56 674 aa23.79■■□□□ 1.4
CAPNS1-215ENST00000628018 PATE3B3GLJ2 98 aa23.79■■□□□ 1.4
CAPNS1-215ENST00000628018 PROS1P07225 676 aa23.79■■□□□ 1.4
CAPNS1-215ENST00000628018 CAPZBP47756 277 aa23.79■■□□□ 1.4
CAPNS1-215ENST00000628018 ART3Q13508 389 aa23.79■■□□□ 1.4
CAPNS1-215ENST00000628018 SLC23A3Q6PIS1 610 aa23.79■■□□□ 1.4
CAPNS1-215ENST00000628018 RETREG3Q86VR2 466 aa23.79■■□□□ 1.4
CAPNS1-215ENST00000628018 RIMKLAQ8IXN7 391 aa23.79■■□□□ 1.4
CAPNS1-215ENST00000628018 TRPV3Q8NET8 790 aa23.79■■□□□ 1.4
CAPNS1-215ENST00000628018 WDR48Q8TAF3 677 aa23.79■■□□□ 1.4
CAPNS1-215ENST00000628018 NUDT8Q8WV74 236 aa23.79■■□□□ 1.4
CAPNS1-215ENST00000628018 RAB3IPQ96QF0 476 aaPredicted RBP23.79■■□□□ 1.4
CAPNS1-215ENST00000628018 ABCG4Q9H172 646 aa23.79■■□□□ 1.4
CAPNS1-215ENST00000628018 NLGN3Q9NZ94 848 aa23.79■■□□□ 1.4
CAPNS1-215ENST00000628018 SLC6A14Q9UN76 642 aa23.79■■□□□ 1.4
CAPNS1-215ENST00000628018 ASPDHA6ND91 283 aa23.79■■□□□ 1.4
CAPNS1-215ENST00000628018 RHPN2P1A8MT19 583 aa23.79■■□□□ 1.4
CAPNS1-215ENST00000628018 PLPP1O14494 284 aa23.79■■□□□ 1.4
CAPNS1-215ENST00000628018 MRASO14807 208 aa23.79■■□□□ 1.4
CAPNS1-215ENST00000628018 ANGPT2O15123 496 aa23.79■■□□□ 1.4
CAPNS1-215ENST00000628018 YKT6O15498 198 aa23.79■■□□□ 1.4
CAPNS1-215ENST00000628018 NUDT21O43809 227 aaKnown RBP23.79■■□□□ 1.4
CAPNS1-215ENST00000628018 PCDH7O60245 1069 aa23.79■■□□□ 1.4
CAPNS1-215ENST00000628018 ANXA4P09525 319 aaPredicted RBP23.79■■□□□ 1.4
CAPNS1-215ENST00000628018 EPHA4P54764 986 aa23.79■■□□□ 1.4
CAPNS1-215ENST00000628018 HYAL2Q12891 473 aa23.79■■□□□ 1.4
CAPNS1-215ENST00000628018 BAHD1Q8TBE0 780 aaPredicted RBP23.79■■□□□ 1.4
CAPNS1-215ENST00000628018 VPS33AQ96AX1 596 aa23.79■■□□□ 1.4
CAPNS1-215ENST00000628018 ZNF717Q9BY31 904 aaPredicted RBP23.79■■□□□ 1.4
CAPNS1-215ENST00000628018 GAREM1Q9H706 876 aa23.79■■□□□ 1.4
CAPNS1-215ENST00000628018 IL21RQ9HBE5 538 aa23.79■■□□□ 1.4
CAPNS1-215ENST00000628018 NDE1Q9NXR1 346 aa23.79■■□□□ 1.4
CAPNS1-215ENST00000628018 MAP10Q9P2G4 905 aa23.79■■□□□ 1.4
CAPNS1-215ENST00000628018 LRIT1Q9P2V4 623 aa23.79■■□□□ 1.4
CAPNS1-215ENST00000628018 PILRAQ9UKJ1 303 aa23.79■■□□□ 1.4
CAPNS1-215ENST00000628018 LRIT2A6NDA9 550 aa23.78■■□□□ 1.4
CAPNS1-215ENST00000628018 NDUFS4O43181 175 aa23.78■■□□□ 1.4
CAPNS1-215ENST00000628018 PRMT3O60678 531 aa23.78■■□□□ 1.4
CAPNS1-215ENST00000628018 EEDO75530 441 aaKnown RBP23.78■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms