RNA–Protein interactions for RNA: ENST00000627371.1

PTCD3-220, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5 BASIC

Gene PTCD3, Length 210 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-220ENST00000627371 WFS1O76024 890 aa19.33■□□□□ 0.68
PTCD3-220ENST00000627371 ONECUT2O95948 504 aa19.33■□□□□ 0.68
PTCD3-220ENST00000627371 CAPN1P07384 714 aa19.33■□□□□ 0.68
PTCD3-220ENST00000627371 RPS17P08708 135 aaKnown RBP19.33■□□□□ 0.68
PTCD3-220ENST00000627371 WT1P19544 449 aaPredicted RBP19.33■□□□□ 0.68
PTCD3-220ENST00000627371 CD22P20273 847 aa19.33■□□□□ 0.68
PTCD3-220ENST00000627371 ITGAXP20702 1163 aa19.33■□□□□ 0.68
PTCD3-220ENST00000627371 F8A1P23610 371 aa19.33■□□□□ 0.68
PTCD3-220ENST00000627371 ATP5F1P24539 256 aaPredicted RBP19.33■□□□□ 0.68
PTCD3-220ENST00000627371 LAPTM5Q13571 262 aa19.33■□□□□ 0.68
PTCD3-220ENST00000627371 PWP1Q13610 501 aa19.33■□□□□ 0.68
PTCD3-220ENST00000627371 RBBP5Q15291 538 aaKnown RBP19.33■□□□□ 0.68
PTCD3-220ENST00000627371 NDUFA9Q16795 377 aa19.33■□□□□ 0.68
PTCD3-220ENST00000627371 CCDC153Q494R4 210 aa19.33■□□□□ 0.68
PTCD3-220ENST00000627371 NKAIN1Q4KMZ8 207 aa19.33■□□□□ 0.68
PTCD3-220ENST00000627371 PAGE2BQ5JRK9 111 aa19.33■□□□□ 0.68
PTCD3-220ENST00000627371 CEP85LQ5SZL2 805 aa19.33■□□□□ 0.68
PTCD3-220ENST00000627371 TMEM214Q6NUQ4 689 aaKnown RBP19.33■□□□□ 0.68
PTCD3-220ENST00000627371 PRMT9Q6P2P2 845 aa19.33■□□□□ 0.68
PTCD3-220ENST00000627371 LRIG3Q6UXM1 1119 aa19.33■□□□□ 0.68
PTCD3-220ENST00000627371 TMIGD1Q6UXZ0 262 aa19.33■□□□□ 0.68
PTCD3-220ENST00000627371 CCDC81Q6ZN84 652 aa19.33■□□□□ 0.68
PTCD3-220ENST00000627371 CROCCP2Q86T23 111 aa19.33■□□□□ 0.68
PTCD3-220ENST00000627371 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP19.33■□□□□ 0.68
PTCD3-220ENST00000627371 MYRIPQ8NFW9 859 aa19.33■□□□□ 0.68
PTCD3-220ENST00000627371 TTLQ8NG68 377 aa19.33■□□□□ 0.68
PTCD3-220ENST00000627371 APOPT1Q96IL0 206 aa19.33■□□□□ 0.68
PTCD3-220ENST00000627371 SLC45A3Q96JT2 553 aa19.33■□□□□ 0.68
PTCD3-220ENST00000627371 C1QTNF3Q9BXJ4 246 aa19.33■□□□□ 0.68
PTCD3-220ENST00000627371 GPR87Q9BY21 358 aa19.33■□□□□ 0.68
PTCD3-220ENST00000627371 IL17BQ9UHF5 180 aa19.33■□□□□ 0.68
PTCD3-220ENST00000627371 PCTPQ9UKL6 214 aa19.33■□□□□ 0.68
PTCD3-220ENST00000627371 LOC400499M0QZD8 3231 aa19.33■□□□□ 0.68
PTCD3-220ENST00000627371 C9J4A7 227 aa19.32■□□□□ 0.68
PTCD3-220ENST00000627371 RGS16O15492 202 aaPredicted RBP19.32■□□□□ 0.68
PTCD3-220ENST00000627371 DLX3O60479 287 aa19.32■□□□□ 0.68
PTCD3-220ENST00000627371 PLIN3O60664 434 aa19.32■□□□□ 0.68
PTCD3-220ENST00000627371 PROCP04070 461 aa19.32■□□□□ 0.68
PTCD3-220ENST00000627371 RAB40ALP0C0E4 278 aa19.32■□□□□ 0.68
PTCD3-220ENST00000627371 GSTM2P28161 218 aa19.32■□□□□ 0.68
PTCD3-220ENST00000627371 FAM53BQ14153 422 aa19.32■□□□□ 0.68
PTCD3-220ENST00000627371 NCF4Q15080 339 aa19.32■□□□□ 0.68
PTCD3-220ENST00000627371 SLC22A9Q8IVM8 553 aa19.32■□□□□ 0.68
PTCD3-220ENST00000627371 DTWD1Q8N5C7 304 aa19.32■□□□□ 0.68
PTCD3-220ENST00000627371 BANPQ8N9N5 519 aa19.32■□□□□ 0.68
PTCD3-220ENST00000627371 TRPV3Q8NET8 790 aa19.32■□□□□ 0.68
PTCD3-220ENST00000627371 NT5CQ8TCD5 201 aa19.32■□□□□ 0.68
PTCD3-220ENST00000627371 SEC16BQ96JE7 1060 aa19.32■□□□□ 0.68
PTCD3-220ENST00000627371 MACROD1Q9BQ69 325 aa19.32■□□□□ 0.68
PTCD3-220ENST00000627371 CPNE5Q9HCH3 593 aa19.32■□□□□ 0.68
PTCD3-220ENST00000627371 SENP1Q9P0U3 644 aa19.32■□□□□ 0.68
PTCD3-220ENST00000627371 K7ENP7 123 aa19.31■□□□□ 0.68
PTCD3-220ENST00000627371 UGDHO60701 494 aa19.31■□□□□ 0.68
PTCD3-220ENST00000627371 PIM1P11309 404 aaPredicted RBP19.31■□□□□ 0.68
PTCD3-220ENST00000627371 RPS15P62841 145 aaKnown RBP19.31■□□□□ 0.68
PTCD3-220ENST00000627371 HERVK_113P63132 956 aa19.31■□□□□ 0.68
PTCD3-220ENST00000627371 CYP4F2P78329 520 aa19.31■□□□□ 0.68
PTCD3-220ENST00000627371 RGS1Q08116 209 aa19.31■□□□□ 0.68
PTCD3-220ENST00000627371 HIST2H2ACQ16777 129 aaPredicted RBP19.31■□□□□ 0.68
PTCD3-220ENST00000627371 HIST2H2AA3Q6FI13 130 aa19.31■□□□□ 0.68
PTCD3-220ENST00000627371 GRHL2Q6ISB3 625 aa19.31■□□□□ 0.68
PTCD3-220ENST00000627371 INO80CQ6PI98 192 aaPredicted RBP19.31■□□□□ 0.68
PTCD3-220ENST00000627371 ZYG11AQ6WRX3 759 aa19.31■□□□□ 0.68
PTCD3-220ENST00000627371 METTL27Q8N6F8 245 aaPredicted RBP19.31■□□□□ 0.68
PTCD3-220ENST00000627371 KCT2Q8NC54 265 aa19.31■□□□□ 0.68
PTCD3-220ENST00000627371 CREB3L4Q8TEY5 395 aa19.31■□□□□ 0.68
PTCD3-220ENST00000627371 ZNF483Q8TF39 744 aaPredicted RBP19.31■□□□□ 0.68
PTCD3-220ENST00000627371 STARD8Q92502 1023 aa19.31■□□□□ 0.68
PTCD3-220ENST00000627371 MOCOSQ96EN8 888 aa19.31■□□□□ 0.68
PTCD3-220ENST00000627371 SMC6Q96SB8 1091 aa19.31■□□□□ 0.68
PTCD3-220ENST00000627371 RUFY1Q96T51 708 aa19.31■□□□□ 0.68
PTCD3-220ENST00000627371 ERVK-6Q9BXR3 956 aa19.31■□□□□ 0.68
PTCD3-220ENST00000627371 DRC3Q9H069 523 aa19.31■□□□□ 0.68
PTCD3-220ENST00000627371 IPPKQ9H8X2 491 aa19.31■□□□□ 0.68
PTCD3-220ENST00000627371 SLC22A11Q9NSA0 550 aa19.31■□□□□ 0.68
PTCD3-220ENST00000627371 IFT80Q9P2H3 777 aaPredicted RBP19.31■□□□□ 0.68
PTCD3-220ENST00000627371 CDC14AQ9UNH5 594 aa19.31■□□□□ 0.68
PTCD3-220ENST00000627371 MRPS2Q9Y399 296 aaKnown RBP19.31■□□□□ 0.68
PTCD3-220ENST00000627371 MRPS18BQ9Y676 258 aaKnown RBP19.31■□□□□ 0.68
PTCD3-220ENST00000627371 KMT2BQ9UMN6 2715 aaPredicted RBP19.31■□□□□ 0.68
PTCD3-220ENST00000627371 G3V2L1 256 aa19.3■□□□□ 0.68
PTCD3-220ENST00000627371 FOXS1O43638 330 aa19.3■□□□□ 0.68
PTCD3-220ENST00000627371 SERPIND1P05546 499 aa19.3■□□□□ 0.68
PTCD3-220ENST00000627371 MYL2P10916 166 aa19.3■□□□□ 0.68
PTCD3-220ENST00000627371 PTPN4P29074 926 aa19.3■□□□□ 0.68
PTCD3-220ENST00000627371 HNF4AP41235 474 aa19.3■□□□□ 0.68
PTCD3-220ENST00000627371 OR1D4P47884 311 aa19.3■□□□□ 0.68
PTCD3-220ENST00000627371 PRKAA2P54646 552 aa19.3■□□□□ 0.68
PTCD3-220ENST00000627371 VAC14Q08AM6 782 aa19.3■□□□□ 0.68
PTCD3-220ENST00000627371 SLC9A5Q14940 896 aa19.3■□□□□ 0.68
PTCD3-220ENST00000627371 ZNF678Q5SXM1 525 aa19.3■□□□□ 0.68
PTCD3-220ENST00000627371 LIPJQ5W064 366 aa19.3■□□□□ 0.68
PTCD3-220ENST00000627371 COX15Q7KZN9 410 aa19.3■□□□□ 0.68
PTCD3-220ENST00000627371 ENDOVQ8N8Q3 282 aaKnown RBP19.3■□□□□ 0.68
PTCD3-220ENST00000627371 ZSCAN1Q8NBB4 408 aa19.3■□□□□ 0.68
PTCD3-220ENST00000627371 RDH11Q8TC12 318 aa19.3■□□□□ 0.68
PTCD3-220ENST00000627371 SNRNP27Q8WVK2 155 aaKnown RBP19.3■□□□□ 0.68
PTCD3-220ENST00000627371 ZDHHC19Q8WVZ1 309 aaPredicted RBP19.3■□□□□ 0.68
PTCD3-220ENST00000627371 UBE2E3Q969T4 207 aa19.3■□□□□ 0.68
PTCD3-220ENST00000627371 FKBP10Q96AY3 582 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms