RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 SAMD4AQ9UPU9 718 aaKnown RBP18.96■□□□□ 0.63
PCDHB11-202ENST00000624887 EXO1Q9UQ84 846 aaKnown RBP18.96■□□□□ 0.63
PCDHB11-202ENST00000624887 KMOO15229 486 aa18.95■□□□□ 0.62
PCDHB11-202ENST00000624887 CLIC3O95833 236 aa18.95■□□□□ 0.62
PCDHB11-202ENST00000624887 TGFB1P01137 390 aa18.95■□□□□ 0.62
PCDHB11-202ENST00000624887 RPN2P04844 631 aa18.95■□□□□ 0.62
PCDHB11-202ENST00000624887 LAMP2P13473 410 aa18.95■□□□□ 0.62
PCDHB11-202ENST00000624887 TEAD1P28347 426 aa18.95■□□□□ 0.62
PCDHB11-202ENST00000624887 MEF2AQ02078 507 aaPredicted RBP18.95■□□□□ 0.62
PCDHB11-202ENST00000624887 LRRC74AQ0VAA2 488 aa18.95■□□□□ 0.62
PCDHB11-202ENST00000624887 BIRC2Q13490 618 aa18.95■□□□□ 0.62
PCDHB11-202ENST00000624887 ATAT1Q5SQI0 421 aa18.95■□□□□ 0.62
PCDHB11-202ENST00000624887 ADHFE1Q8IWW8 467 aa18.95■□□□□ 0.62
PCDHB11-202ENST00000624887 ZZZ3Q8IYH5 903 aa18.95■□□□□ 0.62
PCDHB11-202ENST00000624887 CLEC4FQ8N1N0 589 aa18.95■□□□□ 0.62
PCDHB11-202ENST00000624887 ZCCHC7Q8N3Z6 543 aaKnown RBP18.95■□□□□ 0.62
PCDHB11-202ENST00000624887 SNX19Q92543 992 aa18.95■□□□□ 0.62
PCDHB11-202ENST00000624887 SDCCAG3Q96C92 435 aa18.95■□□□□ 0.62
PCDHB11-202ENST00000624887 TRMT61BQ9BVS5 477 aaKnown RBP18.95■□□□□ 0.62
PCDHB11-202ENST00000624887 TPT1P8Q9HAU6 139 aa18.95■□□□□ 0.62
PCDHB11-202ENST00000624887 MBNL1Q9NR56 388 aaKnown RBP18.95■□□□□ 0.62
PCDHB11-202ENST00000624887 MAGED1Q9Y5V3 778 aaPredicted RBP18.95■□□□□ 0.62
PCDHB11-202ENST00000624887 REV3LO60673 3130 aa18.95■□□□□ 0.62
PCDHB11-202ENST00000624887 CEP290O15078 2479 aa18.95■□□□□ 0.62
PCDHB11-202ENST00000624887 NUMA1Q14980 2115 aa18.95■□□□□ 0.62
PCDHB11-202ENST00000624887 A0A1W2PP55 124 aa18.95■□□□□ 0.62
PCDHB11-202ENST00000624887 C1orf226A1L170 272 aa18.95■□□□□ 0.62
PCDHB11-202ENST00000624887 GPR89AB7ZAQ6 455 aa18.95■□□□□ 0.62
PCDHB11-202ENST00000624887 RNASET2O00584 256 aaKnown RBP18.95■□□□□ 0.62
PCDHB11-202ENST00000624887 ALBP02768 609 aa18.95■□□□□ 0.62
PCDHB11-202ENST00000624887 GPR89BP0CG08 455 aa18.95■□□□□ 0.62
PCDHB11-202ENST00000624887 TRIM23P36406 574 aa18.95■□□□□ 0.62
PCDHB11-202ENST00000624887 PHEXP78562 749 aa18.95■□□□□ 0.62
PCDHB11-202ENST00000624887 MYBPC3Q14896 1274 aa18.95■□□□□ 0.62
PCDHB11-202ENST00000624887 ABRAXAS1Q6UWZ7 409 aa18.95■□□□□ 0.62
PCDHB11-202ENST00000624887 RBM44Q6ZP01 1051 aaKnown RBP18.95■□□□□ 0.62
PCDHB11-202ENST00000624887 FAM129CQ86XR2 697 aa18.95■□□□□ 0.62
PCDHB11-202ENST00000624887 PTOV1Q86YD1 416 aa18.95■□□□□ 0.62
PCDHB11-202ENST00000624887 ZNF786Q8N393 782 aa18.95■□□□□ 0.62
PCDHB11-202ENST00000624887 TRIML2Q8N7C3 387 aa18.95■□□□□ 0.62
PCDHB11-202ENST00000624887 ZNF740Q8NDX6 193 aa18.95■□□□□ 0.62
PCDHB11-202ENST00000624887 RDH12Q96NR8 316 aa18.95■□□□□ 0.62
PCDHB11-202ENST00000624887 RPP25Q9BUL9 199 aaKnown RBP18.95■□□□□ 0.62
PCDHB11-202ENST00000624887 BHLHE41Q9C0J9 482 aaPredicted RBP18.95■□□□□ 0.62
PCDHB11-202ENST00000624887 RBM38Q9H0Z9 239 aaKnown RBP18.95■□□□□ 0.62
PCDHB11-202ENST00000624887 OR51B5Q9H339 312 aa18.95■□□□□ 0.62
PCDHB11-202ENST00000624887 REEP4Q9H6H4 257 aa18.95■□□□□ 0.62
PCDHB11-202ENST00000624887 TDRKHQ9Y2W6 561 aaKnown RBP18.95■□□□□ 0.62
PCDHB11-202ENST00000624887 TRIM64A6NGJ6 449 aa18.94■□□□□ 0.62
PCDHB11-202ENST00000624887 GNGT2O14610 69 aa18.94■□□□□ 0.62
PCDHB11-202ENST00000624887 THRBP10828 461 aa18.94■□□□□ 0.62
PCDHB11-202ENST00000624887 EFNA1P20827 205 aaPredicted RBP18.94■□□□□ 0.62
PCDHB11-202ENST00000624887 PPIBP23284 216 aaKnown RBP18.94■□□□□ 0.62
PCDHB11-202ENST00000624887 MAGEA2P43356 314 aa18.94■□□□□ 0.62
PCDHB11-202ENST00000624887 IST1P53990 364 aa18.94■□□□□ 0.62
PCDHB11-202ENST00000624887 VAC14Q08AM6 782 aa18.94■□□□□ 0.62
PCDHB11-202ENST00000624887 TMIGD1Q6UXZ0 262 aa18.94■□□□□ 0.62
PCDHB11-202ENST00000624887 METTL4Q8N3J2 472 aa18.94■□□□□ 0.62
PCDHB11-202ENST00000624887 SPATA9Q9BWV2 254 aa18.94■□□□□ 0.62
PCDHB11-202ENST00000624887 SOX17Q9H6I2 414 aaPredicted RBP18.94■□□□□ 0.62
PCDHB11-202ENST00000624887 WDR26Q9H7D7 661 aa18.94■□□□□ 0.62
PCDHB11-202ENST00000624887 TUBA8Q9NY65 449 aaPredicted RBP18.94■□□□□ 0.62
PCDHB11-202ENST00000624887 SH3BP4Q9P0V3 963 aa18.94■□□□□ 0.62
PCDHB11-202ENST00000624887 ZFR2Q9UPR6 939 aaKnown RBP18.94■□□□□ 0.62
PCDHB11-202ENST00000624887 VILLO15195 856 aa18.93■□□□□ 0.62
PCDHB11-202ENST00000624887 HSD17B2P37059 387 aa18.93■□□□□ 0.62
PCDHB11-202ENST00000624887 TNFRSF4P43489 277 aa18.93■□□□□ 0.62
PCDHB11-202ENST00000624887 KIR2DL1P43626 348 aaPredicted RBP18.93■□□□□ 0.62
PCDHB11-202ENST00000624887 SOX9P48436 509 aa18.93■□□□□ 0.62
PCDHB11-202ENST00000624887 GALK1P51570 392 aa18.93■□□□□ 0.62
PCDHB11-202ENST00000624887 FGL2Q14314 439 aa18.93■□□□□ 0.62
PCDHB11-202ENST00000624887 IRF4Q15306 451 aa18.93■□□□□ 0.62
PCDHB11-202ENST00000624887 ZNF776Q68DI1 518 aaPredicted RBP18.93■□□□□ 0.62
PCDHB11-202ENST00000624887 BORAQ6PGQ7 559 aa18.93■□□□□ 0.62
PCDHB11-202ENST00000624887 OFCC1Q8IZS5 231 aa18.93■□□□□ 0.62
PCDHB11-202ENST00000624887 KRT78Q8N1N4 520 aa18.93■□□□□ 0.62
PCDHB11-202ENST00000624887 C2orf73Q8N5S3 287 aaPredicted RBP18.93■□□□□ 0.62
PCDHB11-202ENST00000624887 OSBPL10Q9BXB5 764 aa18.93■□□□□ 0.62
PCDHB11-202ENST00000624887 USE1Q9NZ43 259 aa18.93■□□□□ 0.62
PCDHB11-202ENST00000624887 CORO2BQ9UQ03 480 aa18.93■□□□□ 0.62
PCDHB11-202ENST00000624887 OR1A2Q9Y585 309 aa18.93■□□□□ 0.62
PCDHB11-202ENST00000624887 DOCK9Q9BZ29 2069 aa18.93■□□□□ 0.62
PCDHB11-202ENST00000624887 TRIM64CA6NLI5 447 aa18.93■□□□□ 0.62
PCDHB11-202ENST00000624887 K7EQS6 105 aa18.93■□□□□ 0.62
PCDHB11-202ENST00000624887 SAP18O00422 153 aaKnown RBP18.93■□□□□ 0.62
PCDHB11-202ENST00000624887 KDELR2P33947 212 aa18.93■□□□□ 0.62
PCDHB11-202ENST00000624887 ALDH3B2P48448 385 aa18.93■□□□□ 0.62
PCDHB11-202ENST00000624887 PPP2R2BQ00005 443 aa18.93■□□□□ 0.62
PCDHB11-202ENST00000624887 VEZF1Q14119 521 aa18.93■□□□□ 0.62
PCDHB11-202ENST00000624887 CYP2A13Q16696 494 aa18.93■□□□□ 0.62
PCDHB11-202ENST00000624887 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.93■□□□□ 0.62
PCDHB11-202ENST00000624887 LRRC23Q53EV4 343 aaPredicted RBP18.93■□□□□ 0.62
PCDHB11-202ENST00000624887 R3HCC1LQ7Z5L2 792 aaKnown RBP18.93■□□□□ 0.62
PCDHB11-202ENST00000624887 EGFL6Q8IUX8 553 aa18.93■□□□□ 0.62
PCDHB11-202ENST00000624887 TP53I13Q8NBR0 393 aaPredicted RBP18.93■□□□□ 0.62
PCDHB11-202ENST00000624887 WDR48Q8TAF3 677 aa18.93■□□□□ 0.62
PCDHB11-202ENST00000624887 ZFP90Q8TF47 636 aa18.93■□□□□ 0.62
PCDHB11-202ENST00000624887 MENTQ9BUN1 341 aa18.93■□□□□ 0.62
PCDHB11-202ENST00000624887 MYNNQ9NPC7 610 aa18.93■□□□□ 0.62
PCDHB11-202ENST00000624887 ATAD3AQ9NVI7 634 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms