RNA–Protein interactions for RNA: ENST00000622183.1

CPNE3-213, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 156 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-213ENST00000622183 TDHQ8IZJ6 230 aa4.38□□□□□ -1.71
CPNE3-213ENST00000622183 FAM89BQ8N5H3 189 aa4.38□□□□□ -1.71
CPNE3-213ENST00000622183 GBP7Q8N8V2 638 aaPredicted RBP4.38□□□□□ -1.71
CPNE3-213ENST00000622183 OR4C15Q8NGM1 316 aa4.38□□□□□ -1.71
CPNE3-213ENST00000622183 OR2T11Q8NH01 316 aa4.38□□□□□ -1.71
CPNE3-213ENST00000622183 OR1L3Q8NH93 324 aa4.38□□□□□ -1.71
CPNE3-213ENST00000622183 GIMAP5Q96F15 307 aa4.38□□□□□ -1.71
CPNE3-213ENST00000622183 LMLNQ96KR4 655 aa4.38□□□□□ -1.71
CPNE3-213ENST00000622183 LPAR4Q99677 370 aa4.38□□□□□ -1.71
CPNE3-213ENST00000622183 PIGQQ9BRB3 760 aa4.38□□□□□ -1.71
CPNE3-213ENST00000622183 NACAP1Q9BZK3 213 aa4.38□□□□□ -1.71
CPNE3-213ENST00000622183 NAPBQ9H115 298 aa4.38□□□□□ -1.71
CPNE3-213ENST00000622183 C5orf66Q9H5L9 145 aa4.38□□□□□ -1.71
CPNE3-213ENST00000622183 RPF1Q9H9Y2 349 aaKnown RBP4.38□□□□□ -1.71
CPNE3-213ENST00000622183 MAGEF1Q9HAY2 307 aa4.38□□□□□ -1.71
CPNE3-213ENST00000622183 PRMT8Q9NR22 394 aaPredicted RBP4.38□□□□□ -1.71
CPNE3-213ENST00000622183 EXOC1Q9NV70 894 aa4.38□□□□□ -1.71
CPNE3-213ENST00000622183 MIS18AQ9NYP9 233 aa4.38□□□□□ -1.71
CPNE3-213ENST00000622183 PRDM4Q9UKN5 801 aa4.38□□□□□ -1.71
CPNE3-213ENST00000622183 NSG2Q9Y328 171 aa4.38□□□□□ -1.71
CPNE3-213ENST00000622183 SPAG9O60271 1321 aaKnown RBP4.38□□□□□ -1.71
CPNE3-213ENST00000622183 MAGEB16A2A368 324 aa4.37□□□□□ -1.71
CPNE3-213ENST00000622183 MTMR11A4FU01 709 aa4.37□□□□□ -1.71
CPNE3-213ENST00000622183 EME2A4GXA9 379 aaPredicted RBP4.37□□□□□ -1.71
CPNE3-213ENST00000622183 SNURFLB1AK76 121 aa4.37□□□□□ -1.71
CPNE3-213ENST00000622183 EXTL3O43909 919 aa4.37□□□□□ -1.71
CPNE3-213ENST00000622183 LMX1BO60663 402 aa4.37□□□□□ -1.71
CPNE3-213ENST00000622183 LETM1O95202 739 aaPredicted RBP4.37□□□□□ -1.71
CPNE3-213ENST00000622183 PAK4O96013 591 aaPredicted RBP4.37□□□□□ -1.71
CPNE3-213ENST00000622183 GOT1P17174 413 aa4.37□□□□□ -1.71
CPNE3-213ENST00000622183 ELAVL4P26378 380 aaKnown RBP4.37□□□□□ -1.71
CPNE3-213ENST00000622183 RBMS1P29558 406 aaKnown RBP4.37□□□□□ -1.71
CPNE3-213ENST00000622183 SRD5A2P31213 254 aa4.37□□□□□ -1.71
CPNE3-213ENST00000622183 LINC01547P58512 204 aaPredicted RBP4.37□□□□□ -1.71
CPNE3-213ENST00000622183 FKBP1BP68106 108 aa4.37□□□□□ -1.71
CPNE3-213ENST00000622183 PHEXP78562 749 aa4.37□□□□□ -1.71
CPNE3-213ENST00000622183 MAPK11Q15759 364 aa4.37□□□□□ -1.71
CPNE3-213ENST00000622183 STPG1Q5TH74 334 aa4.37□□□□□ -1.71
CPNE3-213ENST00000622183 RAB12Q6IQ22 244 aa4.37□□□□□ -1.71
CPNE3-213ENST00000622183 SH2D5Q6ZV89 423 aa4.37□□□□□ -1.71
CPNE3-213ENST00000622183 FCRLAQ7L513 359 aa4.37□□□□□ -1.71
CPNE3-213ENST00000622183 COX8CQ7Z4L0 72 aa4.37□□□□□ -1.71
CPNE3-213ENST00000622183 RABEPKQ7Z6M1 372 aa4.37□□□□□ -1.71
CPNE3-213ENST00000622183 ASPGQ86U10 573 aa4.37□□□□□ -1.71
CPNE3-213ENST00000622183 GPC2Q8N158 579 aa4.37□□□□□ -1.71
CPNE3-213ENST00000622183 TMEM99Q8N816 258 aa4.37□□□□□ -1.71
CPNE3-213ENST00000622183 OR10V1Q8NGI7 309 aa4.37□□□□□ -1.71
CPNE3-213ENST00000622183 CFAP36Q96G28 342 aa4.37□□□□□ -1.71
CPNE3-213ENST00000622183 C10orf90Q96M02 699 aa4.37□□□□□ -1.71
CPNE3-213ENST00000622183 UHRF2Q96PU4 802 aa4.37□□□□□ -1.71
CPNE3-213ENST00000622183 TSPYL1Q9H0U9 437 aa4.37□□□□□ -1.71
CPNE3-213ENST00000622183 ATP13A3Q9H7F0 1226 aa4.37□□□□□ -1.71
CPNE3-213ENST00000622183 TBC1D13Q9NVG8 400 aa4.37□□□□□ -1.71
CPNE3-213ENST00000622183 HMG20BQ9P0W2 317 aa4.37□□□□□ -1.71
CPNE3-213ENST00000622183 FBXL4Q9UKA2 621 aa4.37□□□□□ -1.71
CPNE3-213ENST00000622183 PILRBQ9UKJ0 227 aa4.37□□□□□ -1.71
CPNE3-213ENST00000622183 ELF5Q9UKW6 265 aaPredicted RBP4.37□□□□□ -1.71
CPNE3-213ENST00000622183 ABCC9O60706 1549 aa4.36□□□□□ -1.71
CPNE3-213ENST00000622183 MSGN1A6NI15 193 aa4.36□□□□□ -1.71
CPNE3-213ENST00000622183 BLOC1S5-TXNDC5H3BN57 136 aa4.36□□□□□ -1.71
CPNE3-213ENST00000622183 TEX28O15482 410 aa4.36□□□□□ -1.71
CPNE3-213ENST00000622183 BCAS2O75934 225 aaPredicted RBP4.36□□□□□ -1.71
CPNE3-213ENST00000622183 EML2O95834 649 aa4.36□□□□□ -1.71
CPNE3-213ENST00000622183 VTNP04004 478 aa4.36□□□□□ -1.71
CPNE3-213ENST00000622183 FAM157CP0CG43 387 aa4.36□□□□□ -1.71
CPNE3-213ENST00000622183 TYMPP19971 482 aa4.36□□□□□ -1.71
CPNE3-213ENST00000622183 TIMP3P35625 211 aa4.36□□□□□ -1.71
CPNE3-213ENST00000622183 ARHGEF16Q5VV41 709 aa4.36□□□□□ -1.71
CPNE3-213ENST00000622183 OR4C11Q6IEV9 310 aa4.36□□□□□ -1.71
CPNE3-213ENST00000622183 ETFRF1Q6IPR1 90 aa4.36□□□□□ -1.71
CPNE3-213ENST00000622183 ZNF790Q6PG37 636 aa4.36□□□□□ -1.71
CPNE3-213ENST00000622183 LEKR1Q6ZMV7 388 aa4.36□□□□□ -1.71
CPNE3-213ENST00000622183 SLC24A5Q71RS6 500 aa4.36□□□□□ -1.71
CPNE3-213ENST00000622183 TRMT1LQ7Z2T5 733 aaKnown RBP4.36□□□□□ -1.71
CPNE3-213ENST00000622183 ZNF410Q86VK4 478 aa4.36□□□□□ -1.71
CPNE3-213ENST00000622183 TMEM126BQ8IUX1 230 aa4.36□□□□□ -1.71
CPNE3-213ENST00000622183 SERPINA12Q8IW75 414 aa4.36□□□□□ -1.71
CPNE3-213ENST00000622183 LAX1Q8IWV1 398 aa4.36□□□□□ -1.71
CPNE3-213ENST00000622183 ZNF619Q8N2I2 560 aa4.36□□□□□ -1.71
CPNE3-213ENST00000622183 NIPA2Q8N8Q9 360 aa4.36□□□□□ -1.71
CPNE3-213ENST00000622183 CLEC1AQ8NC01 280 aa4.36□□□□□ -1.71
CPNE3-213ENST00000622183 TRIM58Q8NG06 486 aa4.36□□□□□ -1.71
CPNE3-213ENST00000622183 APOBEC4Q8WW27 367 aaKnown RBP4.36□□□□□ -1.71
CPNE3-213ENST00000622183 SUSD6Q92537 303 aa4.36□□□□□ -1.71
CPNE3-213ENST00000622183 WBP2Q969T9 261 aa4.36□□□□□ -1.71
CPNE3-213ENST00000622183 RFT1Q96AA3 541 aa4.36□□□□□ -1.71
CPNE3-213ENST00000622183 CDHR1Q96JP9 859 aa4.36□□□□□ -1.71
CPNE3-213ENST00000622183 CTAGE1Q96RT6 745 aa4.36□□□□□ -1.71
CPNE3-213ENST00000622183 EPYCQ99645 322 aa4.36□□□□□ -1.71
CPNE3-213ENST00000622183 EGLN3Q9H6Z9 239 aa4.36□□□□□ -1.71
CPNE3-213ENST00000622183 SLC52A3Q9NQ40 469 aa4.36□□□□□ -1.71
CPNE3-213ENST00000622183 PANK4Q9NVE7 773 aa4.36□□□□□ -1.71
CPNE3-213ENST00000622183 IL19Q9UHD0 177 aa4.36□□□□□ -1.71
CPNE3-213ENST00000622183 ZNF510Q9Y2H8 683 aa4.36□□□□□ -1.71
CPNE3-213ENST00000622183 PPP2R2CQ9Y2T4 447 aa4.36□□□□□ -1.71
CPNE3-213ENST00000622183 TEX264Q9Y6I9 313 aa4.36□□□□□ -1.71
CPNE3-213ENST00000622183 STK36Q9NRP7 1315 aa4.36□□□□□ -1.71
CPNE3-213ENST00000622183 A0A087WUV0 522 aaPredicted RBP4.35□□□□□ -1.71
CPNE3-213ENST00000622183 TMEM129A0AVI4 362 aa4.35□□□□□ -1.71
CPNE3-213ENST00000622183 M0R296 226 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms