RNA–Protein interactions for RNA: ENST00000621399.1

CIRBP-245, Transcript of cold inducible RNA binding protein, humanhuman

TSL 1 (best)

Gene CIRBP, Length 1,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-245ENST00000621399 GBP5Q96PP8 586 aa17.71■□□□□ 0.43
CIRBP-245ENST00000621399 DPH2Q9BQC3 489 aaPredicted RBP17.71■□□□□ 0.43
CIRBP-245ENST00000621399 ERVK-6Q9BXR3 956 aa17.71■□□□□ 0.43
CIRBP-245ENST00000621399 PITHD1Q9GZP4 211 aaPredicted RBP17.71■□□□□ 0.43
CIRBP-245ENST00000621399 NT5DC2Q9H857 520 aa17.71■□□□□ 0.43
CIRBP-245ENST00000621399 NOL11Q9H8H0 719 aaKnown RBP17.71■□□□□ 0.43
CIRBP-245ENST00000621399 ACTR8Q9H981 624 aa17.71■□□□□ 0.43
CIRBP-245ENST00000621399 AHCTF1Q8WYP5 2266 aa17.7■□□□□ 0.42
CIRBP-245ENST00000621399 ZFHX4Q86UP3 3567 aa17.7■□□□□ 0.42
CIRBP-245ENST00000621399 SDK2Q58EX2 2172 aa17.7■□□□□ 0.42
CIRBP-245ENST00000621399 ACACAQ13085 2346 aa17.7■□□□□ 0.42
CIRBP-245ENST00000621399 SUPT7LO94864 414 aa17.7■□□□□ 0.42
CIRBP-245ENST00000621399 RPS17P08708 135 aaKnown RBP17.7■□□□□ 0.42
CIRBP-245ENST00000621399 TCN2P20062 427 aa17.7■□□□□ 0.42
CIRBP-245ENST00000621399 CD22P20273 847 aa17.7■□□□□ 0.42
CIRBP-245ENST00000621399 IMPDH1P20839 514 aa17.7■□□□□ 0.42
CIRBP-245ENST00000621399 DLSTP36957 453 aa17.7■□□□□ 0.42
CIRBP-245ENST00000621399 ARL1P40616 181 aaPredicted RBP17.7■□□□□ 0.42
CIRBP-245ENST00000621399 CYP4F2P78329 520 aa17.7■□□□□ 0.42
CIRBP-245ENST00000621399 DCDP81605 110 aaKnown RBP17.7■□□□□ 0.42
CIRBP-245ENST00000621399 PWP1Q13610 501 aa17.7■□□□□ 0.42
CIRBP-245ENST00000621399 NDUFA9Q16795 377 aa17.7■□□□□ 0.42
CIRBP-245ENST00000621399 ZNF678Q5SXM1 525 aa17.7■□□□□ 0.42
CIRBP-245ENST00000621399 BROXQ5VW32 411 aa17.7■□□□□ 0.42
CIRBP-245ENST00000621399 EXOC3L1Q86VI1 746 aa17.7■□□□□ 0.42
CIRBP-245ENST00000621399 ARMC2Q8NEN0 867 aa17.7■□□□□ 0.42
CIRBP-245ENST00000621399 TRPV3Q8NET8 790 aa17.7■□□□□ 0.42
CIRBP-245ENST00000621399 TTLQ8NG68 377 aa17.7■□□□□ 0.42
CIRBP-245ENST00000621399 TCP10LQ8TDR4 215 aa17.7■□□□□ 0.42
CIRBP-245ENST00000621399 ZNF483Q8TF39 744 aaPredicted RBP17.7■□□□□ 0.42
CIRBP-245ENST00000621399 CT55Q8WUE5 264 aa17.7■□□□□ 0.42
CIRBP-245ENST00000621399 MOCOSQ96EN8 888 aa17.7■□□□□ 0.42
CIRBP-245ENST00000621399 C10orf90Q96M02 699 aa17.7■□□□□ 0.42
CIRBP-245ENST00000621399 NSUN5Q96P11 429 aaKnown RBP17.7■□□□□ 0.42
CIRBP-245ENST00000621399 TMEM237Q96Q45 408 aa17.7■□□□□ 0.42
CIRBP-245ENST00000621399 CCNL2Q96S94 520 aaPredicted RBP17.7■□□□□ 0.42
CIRBP-245ENST00000621399 C1QTNF3Q9BXJ4 246 aa17.7■□□□□ 0.42
CIRBP-245ENST00000621399 STMN4Q9H169 189 aaPredicted RBP17.7■□□□□ 0.42
CIRBP-245ENST00000621399 CHST8Q9H2A9 424 aa17.7■□□□□ 0.42
CIRBP-245ENST00000621399 GPN2Q9H9Y4 310 aaPredicted RBP17.7■□□□□ 0.42
CIRBP-245ENST00000621399 PRM3Q9NNZ6 103 aa17.7■□□□□ 0.42
CIRBP-245ENST00000621399 SEMA4BQ9NPR2 832 aaPredicted RBP17.7■□□□□ 0.42
CIRBP-245ENST00000621399 MID2Q9UJV3 735 aa17.7■□□□□ 0.42
CIRBP-245ENST00000621399 CROTQ9UKG9 612 aa17.7■□□□□ 0.42
CIRBP-245ENST00000621399 ZNF490Q9ULM2 529 aaPredicted RBP17.7■□□□□ 0.42
CIRBP-245ENST00000621399 ANKRD11Q6UB99 2663 aaPredicted RBP17.7■□□□□ 0.42
CIRBP-245ENST00000621399 SRRM3A6NNA2 597 aaPredicted RBP17.69■□□□□ 0.42
CIRBP-245ENST00000621399 OR7A17O14581 309 aa17.69■□□□□ 0.42
CIRBP-245ENST00000621399 MED26O95402 600 aa17.69■□□□□ 0.42
CIRBP-245ENST00000621399 LIFP15018 202 aa17.69■□□□□ 0.42
CIRBP-245ENST00000621399 ITPKBP27987 946 aa17.69■□□□□ 0.42
CIRBP-245ENST00000621399 HNF4AP41235 474 aa17.69■□□□□ 0.42
CIRBP-245ENST00000621399 CCNG1P51959 295 aa17.69■□□□□ 0.42
CIRBP-245ENST00000621399 CDH13P55290 713 aa17.69■□□□□ 0.42
CIRBP-245ENST00000621399 TLE3Q04726 772 aa17.69■□□□□ 0.42
CIRBP-245ENST00000621399 RGS1Q08116 209 aa17.69■□□□□ 0.42
CIRBP-245ENST00000621399 E2F2Q14209 437 aa17.69■□□□□ 0.42
CIRBP-245ENST00000621399 NKAIN1Q4KMZ8 207 aa17.69■□□□□ 0.42
CIRBP-245ENST00000621399 UNC50Q53HI1 259 aa17.69■□□□□ 0.42
CIRBP-245ENST00000621399 TNFAIP8L3Q5GJ75 292 aa17.69■□□□□ 0.42
CIRBP-245ENST00000621399 LIPJQ5W064 366 aa17.69■□□□□ 0.42
CIRBP-245ENST00000621399 ZNF385CQ66K41 422 aaPredicted RBP17.69■□□□□ 0.42
CIRBP-245ENST00000621399 GRHL2Q6ISB3 625 aa17.69■□□□□ 0.42
CIRBP-245ENST00000621399 LCN10Q6JVE6 187 aa17.69■□□□□ 0.42
CIRBP-245ENST00000621399 MED27Q6P2C8 311 aa17.69■□□□□ 0.42
CIRBP-245ENST00000621399 ZNF517Q6ZMY9 492 aaPredicted RBP17.69■□□□□ 0.42
CIRBP-245ENST00000621399 RPS27LQ71UM5 84 aaKnown RBP17.69■□□□□ 0.42
CIRBP-245ENST00000621399 HDXQ7Z353 690 aa17.69■□□□□ 0.42
CIRBP-245ENST00000621399 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.69■□□□□ 0.42
CIRBP-245ENST00000621399 METTL27Q8N6F8 245 aaPredicted RBP17.69■□□□□ 0.42
CIRBP-245ENST00000621399 KCT2Q8NC54 265 aa17.69■□□□□ 0.42
CIRBP-245ENST00000621399 NT5CQ8TCD5 201 aa17.69■□□□□ 0.42
CIRBP-245ENST00000621399 UBE2E3Q969T4 207 aa17.69■□□□□ 0.42
CIRBP-245ENST00000621399 ACSS2Q9NR19 701 aa17.69■□□□□ 0.42
CIRBP-245ENST00000621399 SLC17A7Q9P2U7 560 aa17.69■□□□□ 0.42
CIRBP-245ENST00000621399 COPG2Q9UBF2 871 aa17.69■□□□□ 0.42
CIRBP-245ENST00000621399 ANKDD1BA6NHY2 528 aa17.68■□□□□ 0.42
CIRBP-245ENST00000621399 TYROBPO43914 113 aa17.68■□□□□ 0.42
CIRBP-245ENST00000621399 CLDN9O95484 217 aa17.68■□□□□ 0.42
CIRBP-245ENST00000621399 TSPAN8P19075 237 aa17.68■□□□□ 0.42
CIRBP-245ENST00000621399 GSTM2P28161 218 aa17.68■□□□□ 0.42
CIRBP-245ENST00000621399 SRSF6Q13247 344 aaKnown RBP17.68■□□□□ 0.42
CIRBP-245ENST00000621399 SLC9A5Q14940 896 aa17.68■□□□□ 0.42
CIRBP-245ENST00000621399 RBBP7Q16576 425 aa17.68■□□□□ 0.42
CIRBP-245ENST00000621399 TMEM214Q6NUQ4 689 aaKnown RBP17.68■□□□□ 0.42
CIRBP-245ENST00000621399 ARHGEF39Q8N4T4 335 aa17.68■□□□□ 0.42
CIRBP-245ENST00000621399 DTWD1Q8N5C7 304 aa17.68■□□□□ 0.42
CIRBP-245ENST00000621399 CCNYL1Q8N7R7 359 aa17.68■□□□□ 0.42
CIRBP-245ENST00000621399 OR52B6Q8NGF0 335 aa17.68■□□□□ 0.42
CIRBP-245ENST00000621399 ZCCHC10Q8TBK6 192 aa17.68■□□□□ 0.42
CIRBP-245ENST00000621399 TRPC4APQ8TEL6 797 aa17.68■□□□□ 0.42
CIRBP-245ENST00000621399 CCT6BQ92526 530 aa17.68■□□□□ 0.42
CIRBP-245ENST00000621399 L3HYPDHQ96EM0 354 aa17.68■□□□□ 0.42
CIRBP-245ENST00000621399 SEC16BQ96JE7 1060 aa17.68■□□□□ 0.42
CIRBP-245ENST00000621399 FAM111AQ96PZ2 611 aa17.68■□□□□ 0.42
CIRBP-245ENST00000621399 CDK15Q96Q40 435 aa17.68■□□□□ 0.42
CIRBP-245ENST00000621399 C17orf62Q9BQA9 187 aa17.68■□□□□ 0.42
CIRBP-245ENST00000621399 EFHD1Q9BUP0 239 aa17.68■□□□□ 0.42
CIRBP-245ENST00000621399 DRC3Q9H069 523 aa17.68■□□□□ 0.42
CIRBP-245ENST00000621399 ZBTB26Q9HCK0 441 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 156.2 ms