RNA–Protein interactions for RNA: ENST00000621181.4

CLK1-215, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CLK1, Length 1,843 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-215ENST00000621181 CELA2AP08217 269 aa7.43□□□□□ -1.22
CLK1-215ENST00000621181 ICAM2P13598 275 aa7.43□□□□□ -1.22
CLK1-215ENST00000621181 PPARGP37231 505 aaPredicted RBP7.43□□□□□ -1.22
CLK1-215ENST00000621181 CETN2P41208 172 aa7.43□□□□□ -1.22
CLK1-215ENST00000621181 SMSP52788 366 aa7.43□□□□□ -1.22
CLK1-215ENST00000621181 ZNF33BQ06732 778 aa7.43□□□□□ -1.22
CLK1-215ENST00000621181 TMED2Q15363 201 aa7.43□□□□□ -1.22
CLK1-215ENST00000621181 PARP6Q2NL67 630 aa7.43□□□□□ -1.22
CLK1-215ENST00000621181 CGB2Q6NT52 195 aa7.43□□□□□ -1.22
CLK1-215ENST00000621181 AFTPHQ6ULP2 937 aa7.43□□□□□ -1.22
CLK1-215ENST00000621181 UNC5DQ6UXZ4 953 aa7.43□□□□□ -1.22
CLK1-215ENST00000621181 TAOK1Q7L7X3 1001 aa7.43□□□□□ -1.22
CLK1-215ENST00000621181 CCDC25Q86WR0 208 aa7.43□□□□□ -1.22
CLK1-215ENST00000621181 OR4N4Q8N0Y3 316 aa7.43□□□□□ -1.22
CLK1-215ENST00000621181 DNAAF3Q8N9W5 541 aa7.43□□□□□ -1.22
CLK1-215ENST00000621181 FAM71DQ8N9W8 422 aa7.43□□□□□ -1.22
CLK1-215ENST00000621181 OR2L3Q8NG85 312 aa7.43□□□□□ -1.22
CLK1-215ENST00000621181 HDAC10Q969S8 669 aa7.43□□□□□ -1.22
CLK1-215ENST00000621181 MAGED4Q96JG8 741 aa7.43□□□□□ -1.22
CLK1-215ENST00000621181 ELAC2Q9BQ52 826 aaKnown RBP7.43□□□□□ -1.22
CLK1-215ENST00000621181 RNF32Q9H0A6 362 aa7.43□□□□□ -1.22
CLK1-215ENST00000621181 ENAMQ9NRM1 1142 aa7.43□□□□□ -1.22
CLK1-215ENST00000621181 C14orf105Q9NVL8 296 aa7.43□□□□□ -1.22
CLK1-215ENST00000621181 STMN3Q9NZ72 180 aa7.43□□□□□ -1.22
CLK1-215ENST00000621181 CTNNAL1Q9UBT7 734 aa7.43□□□□□ -1.22
CLK1-215ENST00000621181 TEKT2Q9UIF3 430 aa7.43□□□□□ -1.22
CLK1-215ENST00000621181 ANAPC5Q9UJX4 755 aa7.43□□□□□ -1.22
CLK1-215ENST00000621181 NCOA6Q14686 2063 aaPredicted RBP7.43□□□□□ -1.22
CLK1-215ENST00000621181 IGLV3-12A0A075B6K2 115 aa7.43□□□□□ -1.22
CLK1-215ENST00000621181 OR5H15A6NDH6 313 aa7.43□□□□□ -1.22
CLK1-215ENST00000621181 PRPF4O43172 522 aaKnown RBP eCLIP7.43□□□□□ -1.22
CLK1-215ENST00000621181 LIASO43766 372 aa7.43□□□□□ -1.22
CLK1-215ENST00000621181 NRP2O60462 931 aa7.43□□□□□ -1.22
CLK1-215ENST00000621181 PRAMEF2O60811 474 aa7.43□□□□□ -1.22
CLK1-215ENST00000621181 GPC4O75487 556 aa7.43□□□□□ -1.22
CLK1-215ENST00000621181 METTL18O95568 372 aa7.43□□□□□ -1.22
CLK1-215ENST00000621181 GOT2P00505 430 aaKnown RBP7.43□□□□□ -1.22
CLK1-215ENST00000621181 HEXBP07686 556 aa7.43□□□□□ -1.22
CLK1-215ENST00000621181 ANXA5P08758 320 aa7.43□□□□□ -1.22
CLK1-215ENST00000621181 ITGAMP11215 1152 aa7.43□□□□□ -1.22
CLK1-215ENST00000621181 AGAP20933 346 aa7.43□□□□□ -1.22
CLK1-215ENST00000621181 PRAMEP78395 509 aa7.43□□□□□ -1.22
CLK1-215ENST00000621181 PMP22Q01453 160 aa7.43□□□□□ -1.22
CLK1-215ENST00000621181 GRB7Q14451 532 aa7.43□□□□□ -1.22
CLK1-215ENST00000621181 NAA25Q14CX7 972 aa7.43□□□□□ -1.22
CLK1-215ENST00000621181 TRIP13Q15645 432 aaPredicted RBP7.43□□□□□ -1.22
CLK1-215ENST00000621181 OASLQ15646 514 aaKnown RBP7.43□□□□□ -1.22
CLK1-215ENST00000621181 WLSQ5T9L3 541 aa7.43□□□□□ -1.22
CLK1-215ENST00000621181 NEK10Q6ZWH5 1172 aa7.43□□□□□ -1.22
CLK1-215ENST00000621181 TRPM8Q7Z2W7 1104 aa7.43□□□□□ -1.22
CLK1-215ENST00000621181 LINC00523Q86TU6 105 aa7.43□□□□□ -1.22
CLK1-215ENST00000621181 TDRPQ86YL5 185 aa7.43□□□□□ -1.22
CLK1-215ENST00000621181 KLHDC8BQ8IXV7 354 aa7.43□□□□□ -1.22
CLK1-215ENST00000621181 ZNF295-AS1Q8N0V1 137 aa7.43□□□□□ -1.22
CLK1-215ENST00000621181 TAB3Q8N5C8 712 aaPredicted RBP7.43□□□□□ -1.22
CLK1-215ENST00000621181 CCDC89Q8N998 374 aa7.43□□□□□ -1.22
CLK1-215ENST00000621181 BBOF1Q8ND07 529 aa7.43□□□□□ -1.22
CLK1-215ENST00000621181 OR13J1Q8NGT2 312 aa7.43□□□□□ -1.22
CLK1-215ENST00000621181 OR6P1Q8NGX9 317 aa7.43□□□□□ -1.22
CLK1-215ENST00000621181 CHTF18Q8WVB6 975 aa7.43□□□□□ -1.22
CLK1-215ENST00000621181 RAD51AP1Q96B01 352 aa7.43□□□□□ -1.22
CLK1-215ENST00000621181 MMABQ96EY8 250 aaPredicted RBP7.43□□□□□ -1.22
CLK1-215ENST00000621181 C10orf90Q96M02 699 aa7.43□□□□□ -1.22
CLK1-215ENST00000621181 ZFYVE21Q9BQ24 234 aa7.43□□□□□ -1.22
CLK1-215ENST00000621181 ABCF3Q9NUQ8 709 aa7.43□□□□□ -1.22
CLK1-215ENST00000621181 CDC14AQ9UNH5 594 aa7.43□□□□□ -1.22
CLK1-215ENST00000621181 DRG1Q9Y295 367 aaKnown RBP7.43□□□□□ -1.22
CLK1-215ENST00000621181 CPAMD8Q8IZJ3 1885 aa7.43□□□□□ -1.22
CLK1-215ENST00000621181 NF1P21359 2839 aa7.42□□□□□ -1.22
CLK1-215ENST00000621181 NAV3Q8IVL0 2385 aa7.42□□□□□ -1.22
CLK1-215ENST00000621181 SCN2AQ99250 2005 aa7.42□□□□□ -1.22
CLK1-215ENST00000621181 SPG11Q96JI7 2443 aa7.42□□□□□ -1.22
CLK1-215ENST00000621181 A0A1W2PQ72 361 aa7.42□□□□□ -1.22
CLK1-215ENST00000621181 FAM227AF5H4B4 570 aa7.42□□□□□ -1.22
CLK1-215ENST00000621181 H0YHG0 523 aa7.42□□□□□ -1.22
CLK1-215ENST00000621181 PRICKLE3O43900 615 aaPredicted RBP7.42□□□□□ -1.22
CLK1-215ENST00000621181 VPS26AO75436 327 aa7.42□□□□□ -1.22
CLK1-215ENST00000621181 SLCO2B1O94956 709 aa7.42□□□□□ -1.22
CLK1-215ENST00000621181 CAPN3P20807 821 aa7.42□□□□□ -1.22
CLK1-215ENST00000621181 BDKRB1P46663 353 aa7.42□□□□□ -1.22
CLK1-215ENST00000621181 GTF2A1P52655 376 aaPredicted RBP7.42□□□□□ -1.22
CLK1-215ENST00000621181 SLC18A1P54219 525 aa7.42□□□□□ -1.22
CLK1-215ENST00000621181 WDR4P57081 412 aaKnown RBP7.42□□□□□ -1.22
CLK1-215ENST00000621181 ELF3P78545 371 aaPredicted RBP7.42□□□□□ -1.22
CLK1-215ENST00000621181 ADORA2A-AS1P86434 159 aa7.42□□□□□ -1.22
CLK1-215ENST00000621181 GTF3C1Q12789 2109 aa7.42□□□□□ -1.22
CLK1-215ENST00000621181 RIPK1Q13546 671 aa7.42□□□□□ -1.22
CLK1-215ENST00000621181 RASA2Q15283 850 aa7.42□□□□□ -1.22
CLK1-215ENST00000621181 C3AR1Q16581 482 aa7.42□□□□□ -1.22
CLK1-215ENST00000621181 FASTKD1Q53R41 847 aaKnown RBP7.42□□□□□ -1.22
CLK1-215ENST00000621181 AARS2Q5JTZ9 985 aaKnown RBP7.42□□□□□ -1.22
CLK1-215ENST00000621181 PTRHD1Q6GMV3 140 aaKnown RBP7.42□□□□□ -1.22
CLK1-215ENST00000621181 SPNS3Q6ZMD2 512 aa7.42□□□□□ -1.22
CLK1-215ENST00000621181 RNF44Q7L0R7 432 aa7.42□□□□□ -1.22
CLK1-215ENST00000621181 PRUNE1Q86TP1 453 aa7.42□□□□□ -1.22
CLK1-215ENST00000621181 RIBC1Q8N443 379 aaPredicted RBP7.42□□□□□ -1.22
CLK1-215ENST00000621181 ANKS4BQ8N8V4 417 aa7.42□□□□□ -1.22
CLK1-215ENST00000621181 OR52K1Q8NGK4 314 aa7.42□□□□□ -1.22
CLK1-215ENST00000621181 OR4L1Q8NH43 312 aa7.42□□□□□ -1.22
CLK1-215ENST00000621181 LKAAEAR1Q8TD35 194 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms