RNA–Protein interactions for RNA: ENST00000620675.4

NEK3-210, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-210ENST00000620675 RUVBL1Q9Y265 456 aaKnown RBP13.01□□□□□ -0.33
NEK3-210ENST00000620675 BRINP1O60477 761 aa13.01□□□□□ -0.33
NEK3-210ENST00000620675 CAPN1P07384 714 aa13.01□□□□□ -0.33
NEK3-210ENST00000620675 PCNAP12004 261 aa13.01□□□□□ -0.33
NEK3-210ENST00000620675 FGF5P12034 268 aa13.01□□□□□ -0.33
NEK3-210ENST00000620675 HNF4AP41235 474 aa13.01□□□□□ -0.33
NEK3-210ENST00000620675 BST1Q10588 318 aa13.01□□□□□ -0.33
NEK3-210ENST00000620675 EIF3IQ13347 325 aaKnown RBP13.01□□□□□ -0.33
NEK3-210ENST00000620675 RCN2Q14257 317 aa13.01□□□□□ -0.33
NEK3-210ENST00000620675 ZC3H12BQ5HYM0 836 aaKnown RBP13.01□□□□□ -0.33
NEK3-210ENST00000620675 SCIMPQ6UWF3 145 aa13.01□□□□□ -0.33
NEK3-210ENST00000620675 PRSS41Q7RTY9 318 aa13.01□□□□□ -0.33
NEK3-210ENST00000620675 PPP1R3BQ86XI6 285 aa13.01□□□□□ -0.33
NEK3-210ENST00000620675 ARHGEF39Q8N4T4 335 aa13.01□□□□□ -0.33
NEK3-210ENST00000620675 CSNK1A1LQ8N752 337 aa13.01□□□□□ -0.33
NEK3-210ENST00000620675 N4BP2L2Q92802 583 aaPredicted RBP13.01□□□□□ -0.33
NEK3-210ENST00000620675 GRAMD1AQ96CP6 724 aa13.01□□□□□ -0.33
NEK3-210ENST00000620675 TM4SF19Q96DZ7 209 aa13.01□□□□□ -0.33
NEK3-210ENST00000620675 EFCAB11Q9BUY7 163 aa13.01□□□□□ -0.33
NEK3-210ENST00000620675 IRAK4Q9NWZ3 460 aa13.01□□□□□ -0.33
NEK3-210ENST00000620675 AKAP7Q9P0M2 348 aaPredicted RBP13.01□□□□□ -0.33
NEK3-210ENST00000620675 DHCR7Q9UBM7 475 aaKnown RBP13.01□□□□□ -0.33
NEK3-210ENST00000620675 FIS1Q9Y3D6 152 aa13.01□□□□□ -0.33
NEK3-210ENST00000620675 PTGDR2Q9Y5Y4 395 aa13.01□□□□□ -0.33
NEK3-210ENST00000620675 NDUFS4O43181 175 aa13□□□□□ -0.33
NEK3-210ENST00000620675 ZNF749O43361 778 aa13□□□□□ -0.33
NEK3-210ENST00000620675 ETHE1O95571 254 aa13□□□□□ -0.33
NEK3-210ENST00000620675 OTCP00480 354 aa13□□□□□ -0.33
NEK3-210ENST00000620675 HNRNPH1P31943 449 aaKnown RBP13□□□□□ -0.33
NEK3-210ENST00000620675 GRK3P35626 688 aa13□□□□□ -0.33
NEK3-210ENST00000620675 GCGRP47871 477 aa13□□□□□ -0.33
NEK3-210ENST00000620675 ITGA1P56199 1179 aa13□□□□□ -0.33
NEK3-210ENST00000620675 PRTGQ2VWP7 1150 aa13□□□□□ -0.33
NEK3-210ENST00000620675 HSP90B2PQ58FF3 399 aa13□□□□□ -0.33
NEK3-210ENST00000620675 SGO1Q5FBB7 561 aa13□□□□□ -0.33
NEK3-210ENST00000620675 LIPJQ5W064 366 aa13□□□□□ -0.33
NEK3-210ENST00000620675 CUZD1Q86UP6 607 aa13□□□□□ -0.33
NEK3-210ENST00000620675 LAS2Q8IYD9 372 aa13□□□□□ -0.33
NEK3-210ENST00000620675 METTL27Q8N6F8 245 aaPredicted RBP13□□□□□ -0.33
NEK3-210ENST00000620675 HUS1BQ8NHY5 278 aa13□□□□□ -0.33
NEK3-210ENST00000620675 WDR20Q8TBZ3 569 aa13□□□□□ -0.33
NEK3-210ENST00000620675 SLC13A3Q8WWT9 602 aa13□□□□□ -0.33
NEK3-210ENST00000620675 C10orf90Q96M02 699 aa13□□□□□ -0.33
NEK3-210ENST00000620675 TAAR9Q96RI9 348 aa13□□□□□ -0.33
NEK3-210ENST00000620675 SORT1Q99523 831 aa13□□□□□ -0.33
NEK3-210ENST00000620675 DRC3Q9H069 523 aa13□□□□□ -0.33
NEK3-210ENST00000620675 MED4Q9NPJ6 270 aa13□□□□□ -0.33
NEK3-210ENST00000620675 ZFP69BQ9UJL9 534 aa13□□□□□ -0.33
NEK3-210ENST00000620675 PCDHGA8Q9Y5G5 932 aa13□□□□□ -0.33
NEK3-210ENST00000620675 AP1M2Q9Y6Q5 423 aa13□□□□□ -0.33
NEK3-210ENST00000620675 A0A0G2JN53 185 aa13□□□□□ -0.33
NEK3-210ENST00000620675 ZSCAN9O15535 394 aaPredicted RBP13□□□□□ -0.33
NEK3-210ENST00000620675 MAP3K7O43318 606 aa13□□□□□ -0.33
NEK3-210ENST00000620675 NPHS1O60500 1241 aa13□□□□□ -0.33
NEK3-210ENST00000620675 H2AFYO75367 372 aaKnown RBP13□□□□□ -0.33
NEK3-210ENST00000620675 KIAA0754O94854 1291 aa13□□□□□ -0.33
NEK3-210ENST00000620675 ESRRBO95718 433 aa13□□□□□ -0.33
NEK3-210ENST00000620675 MLYCDO95822 493 aa13□□□□□ -0.33
NEK3-210ENST00000620675 SERPINE1P05121 402 aa13□□□□□ -0.33
NEK3-210ENST00000620675 SLC5A2P31639 672 aa13□□□□□ -0.33
NEK3-210ENST00000620675 RELAQ04206 551 aa13□□□□□ -0.33
NEK3-210ENST00000620675 NAA25Q14CX7 972 aa13□□□□□ -0.33
NEK3-210ENST00000620675 MED27Q6P2C8 311 aa13□□□□□ -0.33
NEK3-210ENST00000620675 ASPGQ86U10 573 aa13□□□□□ -0.33
NEK3-210ENST00000620675 TMEM151BQ8IW70 566 aa13□□□□□ -0.33
NEK3-210ENST00000620675 KRT78Q8N1N4 520 aa13□□□□□ -0.33
NEK3-210ENST00000620675 PPP1R14CQ8TAE6 165 aa13□□□□□ -0.33
NEK3-210ENST00000620675 ZCCHC10Q8TBK6 192 aa13□□□□□ -0.33
NEK3-210ENST00000620675 ZNF473Q8WTR7 871 aaKnown RBP13□□□□□ -0.33
NEK3-210ENST00000620675 CNDP1Q96KN2 507 aa13□□□□□ -0.33
NEK3-210ENST00000620675 ZDHHC2Q9UIJ5 367 aa13□□□□□ -0.33
NEK3-210ENST00000620675 MSRB2Q9Y3D2 182 aa13□□□□□ -0.33
NEK3-210ENST00000620675 AK5Q9Y6K8 562 aa13□□□□□ -0.33
NEK3-210ENST00000620675 MAGEB17A8MXT2 336 aa12.99□□□□□ -0.33
NEK3-210ENST00000620675 CDRT15L2A8MXV6 281 aa12.99□□□□□ -0.33
NEK3-210ENST00000620675 H0YIV9 168 aa12.99□□□□□ -0.33
NEK3-210ENST00000620675 SAP18O00422 153 aaKnown RBP12.99□□□□□ -0.33
NEK3-210ENST00000620675 SRPX2O60687 465 aaPredicted RBP12.99□□□□□ -0.33
NEK3-210ENST00000620675 SCRG1O75711 98 aa12.99□□□□□ -0.33
NEK3-210ENST00000620675 TGFB1P01137 390 aa12.99□□□□□ -0.33
NEK3-210ENST00000620675 NEFHP12036 1026 aa12.99□□□□□ -0.33
NEK3-210ENST00000620675 ITGAXP20702 1163 aa12.99□□□□□ -0.33
NEK3-210ENST00000620675 AHRP35869 848 aa12.99□□□□□ -0.33
NEK3-210ENST00000620675 IL11RAQ14626 422 aa12.99□□□□□ -0.33
NEK3-210ENST00000620675 DCAF12Q5T6F0 453 aa12.99□□□□□ -0.33
NEK3-210ENST00000620675 C1orf189Q5VU69 101 aa12.99□□□□□ -0.33
NEK3-210ENST00000620675 LCN10Q6JVE6 187 aa12.99□□□□□ -0.33
NEK3-210ENST00000620675 TIPARPQ7Z3E1 657 aaKnown RBP12.99□□□□□ -0.33
NEK3-210ENST00000620675 ZFAND4Q86XD8 727 aa12.99□□□□□ -0.33
NEK3-210ENST00000620675 TMEM126BQ8IUX1 230 aa12.99□□□□□ -0.33
NEK3-210ENST00000620675 METTL6Q8TCB7 284 aa12.99□□□□□ -0.33
NEK3-210ENST00000620675 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.99□□□□□ -0.33
NEK3-210ENST00000620675 CCT6BQ92526 530 aa12.99□□□□□ -0.33
NEK3-210ENST00000620675 RERGQ96A58 199 aaPredicted RBP12.99□□□□□ -0.33
NEK3-210ENST00000620675 NRSN2Q9GZP1 204 aa12.99□□□□□ -0.33
NEK3-210ENST00000620675 RHBGQ9H310 441 aa12.99□□□□□ -0.33
NEK3-210ENST00000620675 INTS9Q9NV88 658 aaKnown RBP12.99□□□□□ -0.33
NEK3-210ENST00000620675 SERTAD3Q9UJW9 196 aa12.99□□□□□ -0.33
NEK3-210ENST00000620675 NEUROG3Q9Y4Z2 214 aa12.99□□□□□ -0.33
NEK3-210ENST00000620675 TMEM184BQ9Y519 407 aaPredicted RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms