RNA–Protein interactions for RNA: ENST00000620394.1

SRRT-218, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-218ENST00000620394 ZNF808Q8N4W9 903 aaPredicted RBP20.85■□□□□ 0.93
SRRT-218ENST00000620394 BRIX1Q8TDN6 353 aaKnown RBP20.85■□□□□ 0.93
SRRT-218ENST00000620394 TM4SF19Q96DZ7 209 aa20.85■□□□□ 0.93
SRRT-218ENST00000620394 WDR83Q9BRX9 315 aaKnown RBP20.85■□□□□ 0.93
SRRT-218ENST00000620394 YIPF2Q9BWQ6 316 aa20.85■□□□□ 0.93
SRRT-218ENST00000620394 CORO1CQ9ULV4 474 aaPredicted RBP20.85■□□□□ 0.93
SRRT-218ENST00000620394 COX6B1P14854 86 aa20.84■□□□□ 0.93
SRRT-218ENST00000620394 ARG2P78540 354 aa20.84■□□□□ 0.93
SRRT-218ENST00000620394 MAT1AQ00266 395 aaKnown RBP20.84■□□□□ 0.93
SRRT-218ENST00000620394 MORF4L2Q15014 288 aa20.84■□□□□ 0.93
SRRT-218ENST00000620394 C17orf64Q86WR6 236 aa20.84■□□□□ 0.93
SRRT-218ENST00000620394 OR1N1Q8NGS0 311 aa20.84■□□□□ 0.93
SRRT-218ENST00000620394 OR9A4Q8NGU2 314 aa20.84■□□□□ 0.93
SRRT-218ENST00000620394 LINGO1Q96FE5 620 aa20.84■□□□□ 0.93
SRRT-218ENST00000620394 CCDC120Q96HB5 630 aa20.84■□□□□ 0.93
SRRT-218ENST00000620394 SARGQ9BW04 601 aa20.84■□□□□ 0.93
SRRT-218ENST00000620394 FAM129AQ9BZQ8 928 aa20.84■□□□□ 0.93
SRRT-218ENST00000620394 SLC17A6Q9P2U8 582 aa20.84■□□□□ 0.93
SRRT-218ENST00000620394 ADGRG4Q8IZF6 3080 aa20.84■□□□□ 0.93
SRRT-218ENST00000620394 SCN3AQ9NY46 2000 aa20.83■□□□□ 0.93
SRRT-218ENST00000620394 DYTNA2CJ06 578 aa20.83■□□□□ 0.93
SRRT-218ENST00000620394 BCL6P41182 706 aa20.83■□□□□ 0.93
SRRT-218ENST00000620394 AP2B1P63010 937 aa20.83■□□□□ 0.93
SRRT-218ENST00000620394 ZNF630Q2M218 657 aaPredicted RBP20.83■□□□□ 0.93
SRRT-218ENST00000620394 BBS9Q3SYG4 887 aa20.83■□□□□ 0.93
SRRT-218ENST00000620394 TEDDM1Q5T9Z0 273 aa20.83■□□□□ 0.93
SRRT-218ENST00000620394 STEAP4Q687X5 459 aa20.83■□□□□ 0.93
SRRT-218ENST00000620394 GFRALQ6UXV0 394 aa20.83■□□□□ 0.93
SRRT-218ENST00000620394 RPTNQ6XPR3 784 aa20.83■□□□□ 0.93
SRRT-218ENST00000620394 SYDE1Q6ZW31 735 aaPredicted RBP20.83■□□□□ 0.93
SRRT-218ENST00000620394 PRSS41Q7RTY9 318 aa20.83■□□□□ 0.93
SRRT-218ENST00000620394 PALM2Q8IXS6 379 aa20.83■□□□□ 0.93
SRRT-218ENST00000620394 CAMKVQ8NCB2 501 aa20.83■□□□□ 0.93
SRRT-218ENST00000620394 CATSPER1Q8NEC5 780 aa20.83■□□□□ 0.93
SRRT-218ENST00000620394 IMMP1LQ96LU5 166 aa20.83■□□□□ 0.93
SRRT-218ENST00000620394 VN1R1Q9GZP7 353 aa20.83■□□□□ 0.93
SRRT-218ENST00000620394 RNF32Q9H0A6 362 aa20.83■□□□□ 0.93
SRRT-218ENST00000620394 ATG10Q9H0Y0 220 aa20.83■□□□□ 0.93
SRRT-218ENST00000620394 GRPEL1Q9HAV7 217 aa20.83■□□□□ 0.93
SRRT-218ENST00000620394 MKL2Q9ULH7 1088 aa20.83■□□□□ 0.93
SRRT-218ENST00000620394 PKDREJQ9NTG1 2253 aa20.83■□□□□ 0.92
SRRT-218ENST00000620394 TRAV17A0A0B4J275 112 aa20.82■□□□□ 0.92
SRRT-218ENST00000620394 STATHP02808 62 aa20.82■□□□□ 0.92
SRRT-218ENST00000620394 CELA2AP08217 269 aa20.82■□□□□ 0.92
SRRT-218ENST00000620394 C8orf89P0DMQ9 161 aa20.82■□□□□ 0.92
SRRT-218ENST00000620394 HTR1EP28566 365 aa20.82■□□□□ 0.92
SRRT-218ENST00000620394 AP1S2P56377 157 aa20.82■□□□□ 0.92
SRRT-218ENST00000620394 NAE1Q13564 534 aa20.82■□□□□ 0.92
SRRT-218ENST00000620394 FRG1Q14331 258 aaKnown RBP20.82■□□□□ 0.92
SRRT-218ENST00000620394 FAAH2Q6GMR7 532 aa20.82■□□□□ 0.92
SRRT-218ENST00000620394 MRGPRGQ86SM5 289 aa20.82■□□□□ 0.92
SRRT-218ENST00000620394 PDIK1LQ8N165 341 aa20.82■□□□□ 0.92
SRRT-218ENST00000620394 ABHD11Q8NFV4 315 aa20.82■□□□□ 0.92
SRRT-218ENST00000620394 OR56A3Q8NH54 315 aa20.82■□□□□ 0.92
SRRT-218ENST00000620394 LRRC39Q96DD0 335 aa20.82■□□□□ 0.92
SRRT-218ENST00000620394 TAAR6Q96RI8 345 aa20.82■□□□□ 0.92
SRRT-218ENST00000620394 HAUS8Q9BT25 410 aa20.82■□□□□ 0.92
SRRT-218ENST00000620394 TUBB6Q9BUF5 446 aa20.82■□□□□ 0.92
SRRT-218ENST00000620394 TRMT1Q9NXH9 659 aaKnown RBP20.82■□□□□ 0.92
SRRT-218ENST00000620394 PTGFRNQ9P2B2 879 aa20.82■□□□□ 0.92
SRRT-218ENST00000620394 TRGV8A0A0C4DH27 118 aa20.81■□□□□ 0.92
SRRT-218ENST00000620394 CDH1P12830 882 aa20.81■□□□□ 0.92
SRRT-218ENST00000620394 NPPBP16860 134 aa20.81■□□□□ 0.92
SRRT-218ENST00000620394 IL1RNP18510 177 aa20.81■□□□□ 0.92
SRRT-218ENST00000620394 ELK3P41970 407 aa20.81■□□□□ 0.92
SRRT-218ENST00000620394 TNFSF10P50591 281 aa20.81■□□□□ 0.92
SRRT-218ENST00000620394 IL2P60568 153 aa20.81■□□□□ 0.92
SRRT-218ENST00000620394 ZNF800Q2TB10 664 aaPredicted RBP eCLIP20.81■□□□□ 0.92
SRRT-218ENST00000620394 HECTD2Q5U5R9 776 aa20.81■□□□□ 0.92
SRRT-218ENST00000620394 DUPD1Q68J44 220 aa20.81■□□□□ 0.92
SRRT-218ENST00000620394 CAPN13Q6MZZ7 669 aaPredicted RBP20.81■□□□□ 0.92
SRRT-218ENST00000620394 TRMT10BQ6PF06 316 aaKnown RBP20.81■□□□□ 0.92
SRRT-218ENST00000620394 ASPGQ86U10 573 aa20.81■□□□□ 0.92
SRRT-218ENST00000620394 SIRT6Q8N6T7 355 aa20.81■□□□□ 0.92
SRRT-218ENST00000620394 HAS2Q92819 552 aa20.81■□□□□ 0.92
SRRT-218ENST00000620394 RUNDC3BQ96NL0 473 aa20.81■□□□□ 0.92
SRRT-218ENST00000620394 TEX264Q9Y6I9 313 aa20.81■□□□□ 0.92
SRRT-218ENST00000620394 HIST1H2AGP0C0S8 130 aaPredicted RBP20.8■□□□□ 0.92
SRRT-218ENST00000620394 ITGAMP11215 1152 aa20.8■□□□□ 0.92
SRRT-218ENST00000620394 ICAM2P13598 275 aa20.8■□□□□ 0.92
SRRT-218ENST00000620394 HIST1H2ADP20671 130 aa20.8■□□□□ 0.92
SRRT-218ENST00000620394 PDAP1Q13442 181 aaKnown RBP20.8■□□□□ 0.92
SRRT-218ENST00000620394 FAM45BPQ6NSW5 357 aa20.8■□□□□ 0.92
SRRT-218ENST00000620394 HIBCHQ6NVY1 386 aaPredicted RBP20.8■□□□□ 0.92
SRRT-218ENST00000620394 TMEM207Q6UWW9 146 aa20.8■□□□□ 0.92
SRRT-218ENST00000620394 PDSS2Q86YH6 399 aa20.8■□□□□ 0.92
SRRT-218ENST00000620394 CREG2Q8IUH2 290 aa20.8■□□□□ 0.92
SRRT-218ENST00000620394 MFSD9Q8NBP5 474 aa20.8■□□□□ 0.92
SRRT-218ENST00000620394 KCT2Q8NC54 265 aa20.8■□□□□ 0.92
SRRT-218ENST00000620394 OR4K1Q8NGD4 311 aa20.8■□□□□ 0.92
SRRT-218ENST00000620394 OR51Q1Q8NH59 317 aa20.8■□□□□ 0.92
SRRT-218ENST00000620394 FAM45AQ8TCE6 357 aa20.8■□□□□ 0.92
SRRT-218ENST00000620394 PDLIM5Q96HC4 596 aaKnown RBP20.8■□□□□ 0.92
SRRT-218ENST00000620394 HIST1H2AHQ96KK5 128 aa20.8■□□□□ 0.92
SRRT-218ENST00000620394 OLFM1Q99784 485 aa20.8■□□□□ 0.92
SRRT-218ENST00000620394 HIST1H2AJQ99878 128 aa20.8■□□□□ 0.92
SRRT-218ENST00000620394 MACROD1Q9BQ69 325 aa20.8■□□□□ 0.92
SRRT-218ENST00000620394 H2AFJQ9BTM1 129 aa20.8■□□□□ 0.92
SRRT-218ENST00000620394 TRIM8Q9BZR9 551 aa20.8■□□□□ 0.92
SRRT-218ENST00000620394 CHMP2BQ9UQN3 213 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms