RNA–Protein interactions for RNA: ENST00000617482.4

C11orf54-215, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 3 BASIC

Gene C11orf54, Length 2,417 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-215ENST00000617482 GAB1Q13480 694 aa11.38□□□□□ -0.59
C11orf54-215ENST00000617482 VEZF1Q14119 521 aa11.38□□□□□ -0.59
C11orf54-215ENST00000617482 RGNQ15493 299 aa11.38□□□□□ -0.59
C11orf54-215ENST00000617482 CYP27C1Q4G0S4 372 aa11.38□□□□□ -0.59
C11orf54-215ENST00000617482 PRSS36Q5K4E3 855 aa11.38□□□□□ -0.59
C11orf54-215ENST00000617482 CATSPEREQ5SY80 951 aa11.38□□□□□ -0.59
C11orf54-215ENST00000617482 MPP7Q5T2T1 576 aa11.38□□□□□ -0.59
C11orf54-215ENST00000617482 GPR155Q7Z3F1 870 aa11.38□□□□□ -0.59
C11orf54-215ENST00000617482 HSD11B1LQ7Z5J1 315 aa11.38□□□□□ -0.59
C11orf54-215ENST00000617482 P3H2Q8IVL5 708 aa11.38□□□□□ -0.59
C11orf54-215ENST00000617482 ZHX1-C8orf76Q96EF9 292 aa11.38□□□□□ -0.59
C11orf54-215ENST00000617482 FEVQ99581 238 aa11.38□□□□□ -0.59
C11orf54-215ENST00000617482 BCL7BQ9BQE9 202 aa11.38□□□□□ -0.59
C11orf54-215ENST00000617482 BTBD2Q9BX70 525 aa11.38□□□□□ -0.59
C11orf54-215ENST00000617482 FAM83DQ9H4H8 585 aa11.38□□□□□ -0.59
C11orf54-215ENST00000617482 ZBTB20Q9HC78 741 aaPredicted RBP11.38□□□□□ -0.59
C11orf54-215ENST00000617482 CCNB1IP1Q9NPC3 277 aa11.38□□□□□ -0.59
C11orf54-215ENST00000617482 ADPRHL2Q9NX46 363 aa11.38□□□□□ -0.59
C11orf54-215ENST00000617482 RNF6Q9Y252 685 aa11.38□□□□□ -0.59
C11orf54-215ENST00000617482 HS3ST2Q9Y278 367 aa11.38□□□□□ -0.59
C11orf54-215ENST00000617482 PRRC2BQ5JSZ5 2229 aaKnown RBP11.37□□□□□ -0.59
C11orf54-215ENST00000617482 GNG14A0A1W2PPG7 69 aa11.37□□□□□ -0.59
C11orf54-215ENST00000617482 SERTM1A2A2V5 107 aa11.37□□□□□ -0.59
C11orf54-215ENST00000617482 OR2A25A4D2G3 310 aa11.37□□□□□ -0.59
C11orf54-215ENST00000617482 SLC16A5O15375 505 aa11.37□□□□□ -0.59
C11orf54-215ENST00000617482 TEX28O15482 410 aa11.37□□□□□ -0.59
C11orf54-215ENST00000617482 PRMT3O60678 531 aa11.37□□□□□ -0.59
C11orf54-215ENST00000617482 HOXD10P28358 340 aa11.37□□□□□ -0.59
C11orf54-215ENST00000617482 LIPAP38571 399 aa11.37□□□□□ -0.59
C11orf54-215ENST00000617482 CRATP43155 626 aa11.37□□□□□ -0.59
C11orf54-215ENST00000617482 SFSWAPQ12872 951 aaKnown RBP11.37□□□□□ -0.59
C11orf54-215ENST00000617482 POM121L1PQ3SYA9 428 aa11.37□□□□□ -0.59
C11orf54-215ENST00000617482 AGTRAPQ6RW13 159 aa11.37□□□□□ -0.59
C11orf54-215ENST00000617482 FAM124AQ86V42 546 aa11.37□□□□□ -0.59
C11orf54-215ENST00000617482 TMEM25Q86YD3 366 aa11.37□□□□□ -0.59
C11orf54-215ENST00000617482 CPXM2Q8N436 756 aa11.37□□□□□ -0.59
C11orf54-215ENST00000617482 LSM14AQ8ND56 463 aaKnown RBP11.37□□□□□ -0.59
C11orf54-215ENST00000617482 OR4K1Q8NGD4 311 aa11.37□□□□□ -0.59
C11orf54-215ENST00000617482 CLP1Q92989 425 aaKnown RBP11.37□□□□□ -0.59
C11orf54-215ENST00000617482 COPS4Q9BT78 406 aa11.37□□□□□ -0.59
C11orf54-215ENST00000617482 HERC2P3Q9BVR0 1158 aa11.37□□□□□ -0.59
C11orf54-215ENST00000617482 SLIRPQ9GZT3 109 aaKnown RBP11.37□□□□□ -0.59
C11orf54-215ENST00000617482 FBXO8Q9NRD0 319 aa11.37□□□□□ -0.59
C11orf54-215ENST00000617482 PCDHGB3Q9Y5G1 929 aa11.37□□□□□ -0.59
C11orf54-215ENST00000617482 MGAT4DA6NG13 374 aa11.37□□□□□ -0.59
C11orf54-215ENST00000617482 TTC34A8MYJ7 566 aa11.37□□□□□ -0.59
C11orf54-215ENST00000617482 TMEM229AB2RXF0 380 aa11.37□□□□□ -0.59
C11orf54-215ENST00000617482 LEFTY2O00292 366 aa11.37□□□□□ -0.59
C11orf54-215ENST00000617482 GCM2O75603 506 aaPredicted RBP11.37□□□□□ -0.59
C11orf54-215ENST00000617482 SLC16A8O95907 504 aa11.37□□□□□ -0.59
C11orf54-215ENST00000617482 TGFBR2P37173 567 aa11.37□□□□□ -0.59
C11orf54-215ENST00000617482 CLK1P49759 484 aaKnown RBP11.37□□□□□ -0.59
C11orf54-215ENST00000617482 EIF2B2P49770 351 aaKnown RBP11.37□□□□□ -0.59
C11orf54-215ENST00000617482 HNRNPFP52597 415 aaKnown RBP11.37□□□□□ -0.59
C11orf54-215ENST00000617482 TSTA3Q13630 321 aaPredicted RBP11.37□□□□□ -0.59
C11orf54-215ENST00000617482 COX20Q5RI15 118 aa11.37□□□□□ -0.59
C11orf54-215ENST00000617482 ZNF852Q6ZMS4 543 aa11.37□□□□□ -0.59
C11orf54-215ENST00000617482 TSEN54Q7Z6J9 526 aaKnown RBP11.37□□□□□ -0.59
C11orf54-215ENST00000617482 CADM3Q8N126 398 aa11.37□□□□□ -0.59
C11orf54-215ENST00000617482 LMNTD1Q8N9Z9 388 aa11.37□□□□□ -0.59
C11orf54-215ENST00000617482 VPS37AQ8NEZ2 397 aa11.37□□□□□ -0.59
C11orf54-215ENST00000617482 OR4A15Q8NGL6 344 aa11.37□□□□□ -0.59
C11orf54-215ENST00000617482 HUS1BQ8NHY5 278 aa11.37□□□□□ -0.59
C11orf54-215ENST00000617482 PHF10Q8WUB8 498 aaKnown RBP11.37□□□□□ -0.59
C11orf54-215ENST00000617482 IPCEF1Q8WWN9 437 aaPredicted RBP11.37□□□□□ -0.59
C11orf54-215ENST00000617482 C11orf24Q96F05 449 aaPredicted RBP11.37□□□□□ -0.59
C11orf54-215ENST00000617482 HRASLS5Q96KN8 279 aa11.37□□□□□ -0.59
C11orf54-215ENST00000617482 LMLNQ96KR4 655 aa11.37□□□□□ -0.59
C11orf54-215ENST00000617482 RIOK2Q9BVS4 552 aaKnown RBP11.37□□□□□ -0.59
C11orf54-215ENST00000617482 CPEB1Q9BZB8 566 aaKnown RBP11.37□□□□□ -0.59
C11orf54-215ENST00000617482 ATAD3AQ9NVI7 634 aa11.37□□□□□ -0.59
C11orf54-215ENST00000617482 RLIMQ9NVW2 624 aa11.37□□□□□ -0.59
C11orf54-215ENST00000617482 CCL26Q9Y258 94 aa11.37□□□□□ -0.59
C11orf54-215ENST00000617482 C1orf226A1L170 272 aa11.36□□□□□ -0.59
C11orf54-215ENST00000617482 TNFRSF11BO00300 401 aa11.36□□□□□ -0.59
C11orf54-215ENST00000617482 KPNA5O15131 536 aa11.36□□□□□ -0.59
C11orf54-215ENST00000617482 TSPAN6O43657 245 aa11.36□□□□□ -0.59
C11orf54-215ENST00000617482 SLCO2B1O94956 709 aa11.36□□□□□ -0.59
C11orf54-215ENST00000617482 ETFAP13804 333 aa11.36□□□□□ -0.59
C11orf54-215ENST00000617482 BDKRB1P46663 353 aa11.36□□□□□ -0.59
C11orf54-215ENST00000617482 IDH2P48735 452 aaKnown RBP11.36□□□□□ -0.59
C11orf54-215ENST00000617482 NUDT6P53370 316 aa11.36□□□□□ -0.59
C11orf54-215ENST00000617482 SYTL3Q4VX76 610 aa11.36□□□□□ -0.59
C11orf54-215ENST00000617482 ZDHHC20Q5W0Z9 365 aa11.36□□□□□ -0.59
C11orf54-215ENST00000617482 GDPD4Q6W3E5 623 aa11.36□□□□□ -0.59
C11orf54-215ENST00000617482 DSG4Q86SJ6 1040 aa11.36□□□□□ -0.59
C11orf54-215ENST00000617482 IQCF2Q8IXL9 164 aa11.36□□□□□ -0.59
C11orf54-215ENST00000617482 SLC5A8Q8N695 610 aa11.36□□□□□ -0.59
C11orf54-215ENST00000617482 OR7G3Q8NG95 312 aa11.36□□□□□ -0.59
C11orf54-215ENST00000617482 PSMA8Q8TAA3 256 aa11.36□□□□□ -0.59
C11orf54-215ENST00000617482 ZNF558Q96NG5 402 aa11.36□□□□□ -0.59
C11orf54-215ENST00000617482 SAMD11Q96NU1 681 aa11.36□□□□□ -0.59
C11orf54-215ENST00000617482 EPYCQ99645 322 aa11.36□□□□□ -0.59
C11orf54-215ENST00000617482 PITX2Q99697 317 aa11.36□□□□□ -0.59
C11orf54-215ENST00000617482 DOHHQ9BU89 302 aa11.36□□□□□ -0.59
C11orf54-215ENST00000617482 CHST8Q9H2A9 424 aa11.36□□□□□ -0.59
C11orf54-215ENST00000617482 DSN1Q9H410 356 aa11.36□□□□□ -0.59
C11orf54-215ENST00000617482 NDUFAF4Q9P032 175 aa11.36□□□□□ -0.59
C11orf54-215ENST00000617482 STOX2Q9P2F5 926 aaPredicted RBP11.36□□□□□ -0.59
C11orf54-215ENST00000617482 TRIM17Q9Y577 477 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms