RNA–Protein interactions for RNA: ENST00000617432.4

CUL3-216, Transcript of cullin 3, humanhuman

TSL 5 BASIC

Gene CUL3, Length 1,426 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-216ENST00000617432 AKIRIN1Q9H9L7 192 aaPredicted RBP4.44□□□□□ -1.7
CUL3-216ENST00000617432 SLC40A1Q9NP59 571 aa4.44□□□□□ -1.7
CUL3-216ENST00000617432 SLC39A1Q9NY26 324 aa4.44□□□□□ -1.7
CUL3-216ENST00000617432 IL1RAPL1Q9NZN1 696 aa4.44□□□□□ -1.7
CUL3-216ENST00000617432 HACD3Q9P035 362 aa4.44□□□□□ -1.7
CUL3-216ENST00000617432 MARCH4Q9P2E8 410 aaPredicted RBP4.44□□□□□ -1.7
CUL3-216ENST00000617432 PDP2Q9P2J9 529 aa4.44□□□□□ -1.7
CUL3-216ENST00000617432 IL17BQ9UHF5 180 aa4.44□□□□□ -1.7
CUL3-216ENST00000617432 CRLS1Q9UJA2 301 aa4.44□□□□□ -1.7
CUL3-216ENST00000617432 TTC7AQ9ULT0 858 aaPredicted RBP4.44□□□□□ -1.7
CUL3-216ENST00000617432 PLAGL1Q9UM63 463 aa4.44□□□□□ -1.7
CUL3-216ENST00000617432 PKP3Q9Y446 797 aa4.44□□□□□ -1.7
CUL3-216ENST00000617432 PCDHGA7Q9Y5G6 932 aa4.44□□□□□ -1.7
CUL3-216ENST00000617432 MN1Q10571 1320 aaPredicted RBP4.43□□□□□ -1.7
CUL3-216ENST00000617432 UNC13CQ8NB66 2214 aa4.43□□□□□ -1.7
CUL3-216ENST00000617432 ATMQ13315 3056 aa4.43□□□□□ -1.7
CUL3-216ENST00000617432 IGHV5-51A0A0C4DH38 117 aa4.43□□□□□ -1.7
CUL3-216ENST00000617432 TRBV5-4A0A0C4DH59 114 aa4.43□□□□□ -1.7
CUL3-216ENST00000617432 AGAP14A8MT82 685 aa4.43□□□□□ -1.7
CUL3-216ENST00000617432 GOLGA8KD6RF30 607 aa4.43□□□□□ -1.7
CUL3-216ENST00000617432 GOLGA8TH3BQL2 631 aa4.43□□□□□ -1.7
CUL3-216ENST00000617432 BTN3A3O00478 584 aa4.43□□□□□ -1.7
CUL3-216ENST00000617432 NVLO15381 856 aaKnown RBP4.43□□□□□ -1.7
CUL3-216ENST00000617432 NKX2-8O15522 239 aa4.43□□□□□ -1.7
CUL3-216ENST00000617432 HCRTR1O43613 425 aa4.43□□□□□ -1.7
CUL3-216ENST00000617432 RASSF9O75901 435 aa4.43□□□□□ -1.7
CUL3-216ENST00000617432 STK17BO94768 372 aa4.43□□□□□ -1.7
CUL3-216ENST00000617432 TMEM63AO94886 807 aa4.43□□□□□ -1.7
CUL3-216ENST00000617432 GOT2P00505 430 aaKnown RBP4.43□□□□□ -1.7
CUL3-216ENST00000617432 FGGP02679 453 aa4.43□□□□□ -1.7
CUL3-216ENST00000617432 C9P02748 559 aa4.43□□□□□ -1.7
CUL3-216ENST00000617432 PTMAP06454 111 aaKnown RBP4.43□□□□□ -1.7
CUL3-216ENST00000617432 TPBGLP0DKB5 382 aa4.43□□□□□ -1.7
CUL3-216ENST00000617432 PRKAR1AP10644 381 aa4.43□□□□□ -1.7
CUL3-216ENST00000617432 MTHFD1P11586 935 aaKnown RBP4.43□□□□□ -1.7
CUL3-216ENST00000617432 FOLR1P15328 257 aa4.43□□□□□ -1.7
CUL3-216ENST00000617432 AMD1P17707 334 aa4.43□□□□□ -1.7
CUL3-216ENST00000617432 XRCC1P18887 633 aaPredicted RBP4.43□□□□□ -1.7
CUL3-216ENST00000617432 NR1D1P20393 614 aa4.43□□□□□ -1.7
CUL3-216ENST00000617432 MSH3P20585 1137 aa4.43□□□□□ -1.7
CUL3-216ENST00000617432 IDSP22304 550 aa4.43□□□□□ -1.7
CUL3-216ENST00000617432 CSTF2P33240 577 aaKnown RBP eCLIP4.43□□□□□ -1.7
CUL3-216ENST00000617432 CAPZBP47756 277 aa4.43□□□□□ -1.7
CUL3-216ENST00000617432 PRLHRP49683 370 aa4.43□□□□□ -1.7
CUL3-216ENST00000617432 KPNA2P52292 529 aaKnown RBP4.43□□□□□ -1.7
CUL3-216ENST00000617432 FOXG1P55316 489 aaPredicted RBP4.43□□□□□ -1.7
CUL3-216ENST00000617432 FOXM1Q08050 763 aa4.43□□□□□ -1.7
CUL3-216ENST00000617432 DMPKQ09013 629 aa4.43□□□□□ -1.7
CUL3-216ENST00000617432 PRKG2Q13237 762 aa4.43□□□□□ -1.7
CUL3-216ENST00000617432 EIF3IQ13347 325 aaKnown RBP4.43□□□□□ -1.7
CUL3-216ENST00000617432 SQSTM1Q13501 440 aa4.43□□□□□ -1.7
CUL3-216ENST00000617432 ITGA9Q13797 1035 aa4.43□□□□□ -1.7
CUL3-216ENST00000617432 PRPSAP1Q14558 356 aa4.43□□□□□ -1.7
CUL3-216ENST00000617432 BCL7AQ4VC05 210 aa4.43□□□□□ -1.7
CUL3-216ENST00000617432 MANEAQ5SRI9 462 aa4.43□□□□□ -1.7
CUL3-216ENST00000617432 LDLRAP1Q5SW96 308 aa4.43□□□□□ -1.7
CUL3-216ENST00000617432 AGAP9Q5VTM2 703 aa4.43□□□□□ -1.7
CUL3-216ENST00000617432 BROXQ5VW32 411 aa4.43□□□□□ -1.7
CUL3-216ENST00000617432 METRNLQ641Q3 311 aa4.43□□□□□ -1.7
CUL3-216ENST00000617432 LCN10Q6JVE6 187 aa4.43□□□□□ -1.7
CUL3-216ENST00000617432 WDR74Q6RFH5 385 aaPredicted RBP4.43□□□□□ -1.7
CUL3-216ENST00000617432 TAS2R42Q7RTR8 314 aa4.43□□□□□ -1.7
CUL3-216ENST00000617432 SNX20Q7Z614 316 aa4.43□□□□□ -1.7
CUL3-216ENST00000617432 TRIM73Q86UV7 250 aa4.43□□□□□ -1.7
CUL3-216ENST00000617432 CFAP206Q8IYR0 622 aa4.43□□□□□ -1.7
CUL3-216ENST00000617432 SYCE1Q8N0S2 351 aa4.43□□□□□ -1.7
CUL3-216ENST00000617432 KRT222Q8N1A0 295 aa4.43□□□□□ -1.7
CUL3-216ENST00000617432 LILRB2Q8N423 598 aa4.43□□□□□ -1.7
CUL3-216ENST00000617432 PRELID2Q8N945 189 aa4.43□□□□□ -1.7
CUL3-216ENST00000617432 DDB2Q92466 427 aa4.43□□□□□ -1.7
CUL3-216ENST00000617432 RGMAQ96B86 450 aa4.43□□□□□ -1.7
CUL3-216ENST00000617432 CDKN2AIPNLQ96HQ2 116 aa4.43□□□□□ -1.7
CUL3-216ENST00000617432 OR6C1Q96RD1 312 aa4.43□□□□□ -1.7
CUL3-216ENST00000617432 TAAR9Q96RI9 348 aa4.43□□□□□ -1.7
CUL3-216ENST00000617432 CCNL2Q96S94 520 aaPredicted RBP4.43□□□□□ -1.7
CUL3-216ENST00000617432 MAP3K3Q99759 626 aa4.43□□□□□ -1.7
CUL3-216ENST00000617432 ANP32EQ9BTT0 268 aa4.43□□□□□ -1.7
CUL3-216ENST00000617432 HGH1Q9BTY7 390 aa4.43□□□□□ -1.7
CUL3-216ENST00000617432 AP1M1Q9BXS5 423 aa4.43□□□□□ -1.7
CUL3-216ENST00000617432 KRTAP4-4Q9BYR3 166 aa4.43□□□□□ -1.7
CUL3-216ENST00000617432 SPRY4Q9C004 299 aa4.43□□□□□ -1.7
CUL3-216ENST00000617432 TRIM4Q9C037 500 aa4.43□□□□□ -1.7
CUL3-216ENST00000617432 PIF1Q9H611 641 aa4.43□□□□□ -1.7
CUL3-216ENST00000617432 LRRC40Q9H9A6 602 aa4.43□□□□□ -1.7
CUL3-216ENST00000617432 COG4Q9H9E3 785 aa4.43□□□□□ -1.7
CUL3-216ENST00000617432 ARNT2Q9HBZ2 717 aa4.43□□□□□ -1.7
CUL3-216ENST00000617432 CASS4Q9NQ75 786 aa4.43□□□□□ -1.7
CUL3-216ENST00000617432 POT1Q9NUX5 634 aa4.43□□□□□ -1.7
CUL3-216ENST00000617432 NLE1Q9NVX2 485 aaPredicted RBP4.43□□□□□ -1.7
CUL3-216ENST00000617432 ZNF148Q9UQR1 794 aa4.43□□□□□ -1.7
CUL3-216ENST00000617432 RUVBL2Q9Y230 463 aaKnown RBP4.43□□□□□ -1.7
CUL3-216ENST00000617432 PPP2R2CQ9Y2T4 447 aa4.43□□□□□ -1.7
CUL3-216ENST00000617432 AAR2Q9Y312 384 aaKnown RBP4.43□□□□□ -1.7
CUL3-216ENST00000617432 NOX1Q9Y5S8 564 aa4.43□□□□□ -1.7
CUL3-216ENST00000617432 FAM208BQ5VWN6 2430 aa4.43□□□□□ -1.7
CUL3-216ENST00000617432 SPENQ96T58 3664 aaKnown RBP4.42□□□□□ -1.7
CUL3-216ENST00000617432 IGLV3-16A0A075B6K0 115 aa4.42□□□□□ -1.7
CUL3-216ENST00000617432 OR6C74A6NCV1 312 aa4.42□□□□□ -1.7
CUL3-216ENST00000617432 GOLGA6L9A6NEM1 432 aa4.42□□□□□ -1.7
CUL3-216ENST00000617432 OR5K3A6NET4 321 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms