RNA–Protein interactions for RNA: ENST00000615606.4

CLTCL1-208, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,994 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-208ENST00000615606 FTSJ1Q9UET6 329 aa9.12□□□□□ -0.95
CLTCL1-208ENST00000615606 PRODH2Q9UF12 536 aa9.12□□□□□ -0.95
CLTCL1-208ENST00000615606 NENFQ9UMX5 172 aa9.12□□□□□ -0.95
CLTCL1-208ENST00000615606 MYO5AQ9Y4I1 1855 aaKnown RBP9.12□□□□□ -0.95
CLTCL1-208ENST00000615606 ELOA3DA6NLF2 546 aaPredicted RBP9.12□□□□□ -0.95
CLTCL1-208ENST00000615606 SDC3O75056 442 aa9.12□□□□□ -0.95
CLTCL1-208ENST00000615606 GADD45GO95257 159 aa9.12□□□□□ -0.95
CLTCL1-208ENST00000615606 EIF2DP41214 584 aaKnown RBP9.12□□□□□ -0.95
CLTCL1-208ENST00000615606 P2RY2P41231 377 aa9.12□□□□□ -0.95
CLTCL1-208ENST00000615606 IL12RB1P42701 662 aa9.12□□□□□ -0.95
CLTCL1-208ENST00000615606 DGKQP52824 942 aa9.12□□□□□ -0.95
CLTCL1-208ENST00000615606 PLGLB1Q02325 96 aa9.12□□□□□ -0.95
CLTCL1-208ENST00000615606 ENPP2Q13822 863 aa9.12□□□□□ -0.95
CLTCL1-208ENST00000615606 SNAPC1Q16533 368 aa9.12□□□□□ -0.95
CLTCL1-208ENST00000615606 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.12□□□□□ -0.95
CLTCL1-208ENST00000615606 ELOA3BQ3SY89 546 aa9.12□□□□□ -0.95
CLTCL1-208ENST00000615606 ARMCX4Q5H9R4 360 aa9.12□□□□□ -0.95
CLTCL1-208ENST00000615606 TCTE1Q5JU00 501 aa9.12□□□□□ -0.95
CLTCL1-208ENST00000615606 PNCKQ6P2M8 343 aa9.12□□□□□ -0.95
CLTCL1-208ENST00000615606 DEFB123Q8N688 67 aa9.12□□□□□ -0.95
CLTCL1-208ENST00000615606 ELOA3Q8NG57 546 aa9.12□□□□□ -0.95
CLTCL1-208ENST00000615606 OR5AK3PQ8NH89 298 aa9.12□□□□□ -0.95
CLTCL1-208ENST00000615606 ARRDC2Q8TBH0 407 aa9.12□□□□□ -0.95
CLTCL1-208ENST00000615606 NAT14Q8WUY8 206 aa9.12□□□□□ -0.95
CLTCL1-208ENST00000615606 NT5C3BQ969T7 300 aa9.12□□□□□ -0.95
CLTCL1-208ENST00000615606 LRCH3Q96II8 777 aa9.12□□□□□ -0.95
CLTCL1-208ENST00000615606 HSPA12BQ96MM6 686 aa9.12□□□□□ -0.95
CLTCL1-208ENST00000615606 PBX4Q9BYU1 374 aa9.12□□□□□ -0.95
CLTCL1-208ENST00000615606 ALKBH4Q9NXW9 302 aa9.12□□□□□ -0.95
CLTCL1-208ENST00000615606 NFS1Q9Y697 457 aa9.12□□□□□ -0.95
CLTCL1-208ENST00000615606 KIR2DS5A0A0G2JLQ3 304 aa9.12□□□□□ -0.95
CLTCL1-208ENST00000615606 A0A0G2JNG1 304 aa9.12□□□□□ -0.95
CLTCL1-208ENST00000615606 KIR2DS3K7RE56 304 aa9.12□□□□□ -0.95
CLTCL1-208ENST00000615606 HBQ1P09105 142 aa9.12□□□□□ -0.95
CLTCL1-208ENST00000615606 FGF3P11487 239 aaPredicted RBP9.12□□□□□ -0.95
CLTCL1-208ENST00000615606 RNH1P13489 461 aaKnown RBP9.12□□□□□ -0.95
CLTCL1-208ENST00000615606 CYP4B1P13584 511 aa9.12□□□□□ -0.95
CLTCL1-208ENST00000615606 NCK1P16333 377 aa9.12□□□□□ -0.95
CLTCL1-208ENST00000615606 CSNK2BP67870 215 aa9.12□□□□□ -0.95
CLTCL1-208ENST00000615606 CDK3Q00526 305 aa9.12□□□□□ -0.95
CLTCL1-208ENST00000615606 SMAD4Q13485 552 aaKnown RBP9.12□□□□□ -0.95
CLTCL1-208ENST00000615606 KIR2DS5Q14953 304 aa9.12□□□□□ -0.95
CLTCL1-208ENST00000615606 GPR68Q15743 365 aa9.12□□□□□ -0.95
CLTCL1-208ENST00000615606 CEP78Q5JTW2 689 aa9.12□□□□□ -0.95
CLTCL1-208ENST00000615606 CDKL4Q5MAI5 379 aa9.12□□□□□ -0.95
CLTCL1-208ENST00000615606 KIAA0895LQ68EN5 471 aa9.12□□□□□ -0.95
CLTCL1-208ENST00000615606 ZNF765Q7L2R6 523 aa9.12□□□□□ -0.95
CLTCL1-208ENST00000615606 MDGA1Q8NFP4 955 aa9.12□□□□□ -0.95
CLTCL1-208ENST00000615606 OR52J3Q8NH60 311 aa9.12□□□□□ -0.95
CLTCL1-208ENST00000615606 JPH3Q8WXH2 748 aaPredicted RBP9.12□□□□□ -0.95
CLTCL1-208ENST00000615606 KLHL6Q8WZ60 621 aa9.12□□□□□ -0.95
CLTCL1-208ENST00000615606 FBXL8Q96CD0 374 aa9.12□□□□□ -0.95
CLTCL1-208ENST00000615606 A0A1B0GW55 424 aa9.12□□□□□ -0.95
CLTCL1-208ENST00000615606 A0A1W2PP18 115 aa9.12□□□□□ -0.95
CLTCL1-208ENST00000615606 DUX4L2P0CJ85 424 aa9.12□□□□□ -0.95
CLTCL1-208ENST00000615606 DUX4L3P0CJ86 424 aa9.12□□□□□ -0.95
CLTCL1-208ENST00000615606 DUX4L4P0CJ87 422 aa9.12□□□□□ -0.95
CLTCL1-208ENST00000615606 DUX4L5P0CJ88 424 aa9.12□□□□□ -0.95
CLTCL1-208ENST00000615606 DUX4L6P0CJ89 424 aa9.12□□□□□ -0.95
CLTCL1-208ENST00000615606 DUX4L7P0CJ90 424 aa9.12□□□□□ -0.95
CLTCL1-208ENST00000615606 RAP2AP10114 183 aa9.12□□□□□ -0.95
CLTCL1-208ENST00000615606 CD38P28907 300 aa9.12□□□□□ -0.95
CLTCL1-208ENST00000615606 RBMS1P29558 406 aaKnown RBP9.12□□□□□ -0.95
CLTCL1-208ENST00000615606 ZNF140P52738 457 aaPredicted RBP9.12□□□□□ -0.95
CLTCL1-208ENST00000615606 UFM1P61960 85 aa9.12□□□□□ -0.95
CLTCL1-208ENST00000615606 MYBPC1Q00872 1141 aa9.12□□□□□ -0.95
CLTCL1-208ENST00000615606 DOC2AQ14183 400 aa9.12□□□□□ -0.95
CLTCL1-208ENST00000615606 GRM7Q14831 915 aa9.12□□□□□ -0.95
CLTCL1-208ENST00000615606 PTGES3Q15185 160 aaKnown RBP9.12□□□□□ -0.95
CLTCL1-208ENST00000615606 IRF4Q15306 451 aa9.12□□□□□ -0.95
CLTCL1-208ENST00000615606 C1orf53Q5VUE5 145 aa9.12□□□□□ -0.95
CLTCL1-208ENST00000615606 USP53Q70EK8 1073 aa9.12□□□□□ -0.95
CLTCL1-208ENST00000615606 CLVS1Q8IUQ0 354 aaPredicted RBP9.12□□□□□ -0.95
CLTCL1-208ENST00000615606 ZSCAN1Q8NBB4 408 aa9.12□□□□□ -0.95
CLTCL1-208ENST00000615606 ASB16Q96NS5 453 aa9.12□□□□□ -0.95
CLTCL1-208ENST00000615606 DGCR6LQ9BY27 220 aa9.12□□□□□ -0.95
CLTCL1-208ENST00000615606 PTGFRNQ9P2B2 879 aa9.12□□□□□ -0.95
CLTCL1-208ENST00000615606 DUX4Q9UBX2 424 aa9.12□□□□□ -0.95
CLTCL1-208ENST00000615606 EPHA6Q9UF33 1036 aa9.12□□□□□ -0.95
CLTCL1-208ENST00000615606 TESMINQ9Y4I5 508 aa9.12□□□□□ -0.95
CLTCL1-208ENST00000615606 BTN3A3O00478 584 aa9.11□□□□□ -0.95
CLTCL1-208ENST00000615606 TRIM24O15164 1050 aa9.11□□□□□ -0.95
CLTCL1-208ENST00000615606 LDB2O43679 373 aa9.11□□□□□ -0.95
CLTCL1-208ENST00000615606 KLKB1P03952 638 aa9.11□□□□□ -0.95
CLTCL1-208ENST00000615606 SLC7A1P30825 629 aa9.11□□□□□ -0.95
CLTCL1-208ENST00000615606 HOXC12P31275 282 aa9.11□□□□□ -0.95
CLTCL1-208ENST00000615606 TIA1P31483 386 aaKnown RBP eCLIP9.11□□□□□ -0.95
CLTCL1-208ENST00000615606 CDK9P50750 372 aaKnown RBP9.11□□□□□ -0.95
CLTCL1-208ENST00000615606 ZNF630Q2M218 657 aaPredicted RBP9.11□□□□□ -0.95
CLTCL1-208ENST00000615606 UNC50Q53HI1 259 aa9.11□□□□□ -0.95
CLTCL1-208ENST00000615606 NOXRED1Q6NXP6 359 aa9.11□□□□□ -0.95
CLTCL1-208ENST00000615606 FIGLAQ6QHK4 219 aa9.11□□□□□ -0.95
CLTCL1-208ENST00000615606 RPS27LQ71UM5 84 aaKnown RBP9.11□□□□□ -0.95
CLTCL1-208ENST00000615606 OR4K17Q8NGC6 315 aa9.11□□□□□ -0.95
CLTCL1-208ENST00000615606 ZNF671Q8TAW3 534 aa9.11□□□□□ -0.95
CLTCL1-208ENST00000615606 KLHL42Q9P2K6 505 aa9.11□□□□□ -0.95
CLTCL1-208ENST00000615606 AQP12BA6NM10 295 aa9.11□□□□□ -0.95
CLTCL1-208ENST00000615606 WASH3PC4AMC7 463 aa9.11□□□□□ -0.95
CLTCL1-208ENST00000615606 hCG_2039718K7EN88 272 aa9.11□□□□□ -0.95
CLTCL1-208ENST00000615606 MPZL2O60487 215 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms