RNA–Protein interactions for RNA: ENST00000612050.4

CBWD3-208, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,440 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-208ENST00000612050 ATCAYQ86WG3 371 aa11.71□□□□□ -0.53
CBWD3-208ENST00000612050 ZADH2Q8N4Q0 377 aa11.71□□□□□ -0.53
CBWD3-208ENST00000612050 SNX31Q8N9S9 440 aa11.71□□□□□ -0.53
CBWD3-208ENST00000612050 OR4K1Q8NGD4 311 aa11.71□□□□□ -0.53
CBWD3-208ENST00000612050 ANKRD49Q8WVL7 239 aa11.71□□□□□ -0.53
CBWD3-208ENST00000612050 EXT2Q93063 718 aa11.71□□□□□ -0.53
CBWD3-208ENST00000612050 NEIL2Q969S2 332 aa11.71□□□□□ -0.53
CBWD3-208ENST00000612050 MRRFQ96E11 262 aaKnown RBP11.71□□□□□ -0.53
CBWD3-208ENST00000612050 TGIF2Q9GZN2 237 aa11.71□□□□□ -0.53
CBWD3-208ENST00000612050 PITHD1Q9GZP4 211 aaPredicted RBP11.71□□□□□ -0.53
CBWD3-208ENST00000612050 EPS8L2Q9H6S3 715 aa11.71□□□□□ -0.53
CBWD3-208ENST00000612050 SLAMF7Q9NQ25 335 aa11.71□□□□□ -0.53
CBWD3-208ENST00000612050 ZDHHC18Q9NUE0 388 aa11.71□□□□□ -0.53
CBWD3-208ENST00000612050 ZFP69BQ9UJL9 534 aa11.71□□□□□ -0.53
CBWD3-208ENST00000612050 SLC22A7Q9Y694 548 aa11.71□□□□□ -0.53
CBWD3-208ENST00000612050 FER1L5A0AVI2 2057 aa11.71□□□□□ -0.53
CBWD3-208ENST00000612050 CCDC88CQ9P219 2028 aa11.71□□□□□ -0.54
CBWD3-208ENST00000612050 IGLV3-12A0A075B6K2 115 aa11.7□□□□□ -0.54
CBWD3-208ENST00000612050 ANKDD1BA6NHY2 528 aa11.7□□□□□ -0.54
CBWD3-208ENST00000612050 TTLL8A6PVC2 850 aa11.7□□□□□ -0.54
CBWD3-208ENST00000612050 IDSB3KWA1 339 aa11.7□□□□□ -0.54
CBWD3-208ENST00000612050 SUPT3HB4E1H0 165 aa11.7□□□□□ -0.54
CBWD3-208ENST00000612050 PSMD12O00232 456 aaPredicted RBP11.7□□□□□ -0.54
CBWD3-208ENST00000612050 P2RX6O15547 441 aa11.7□□□□□ -0.54
CBWD3-208ENST00000612050 SUPT3HO75486 399 aa11.7□□□□□ -0.54
CBWD3-208ENST00000612050 STK16O75716 305 aa11.7□□□□□ -0.54
CBWD3-208ENST00000612050 KRT38O76015 456 aa11.7□□□□□ -0.54
CBWD3-208ENST00000612050 HPP00738 406 aa11.7□□□□□ -0.54
CBWD3-208ENST00000612050 ICAM2P13598 275 aa11.7□□□□□ -0.54
CBWD3-208ENST00000612050 CD1DP15813 335 aa11.7□□□□□ -0.54
CBWD3-208ENST00000612050 NR1D1P20393 614 aa11.7□□□□□ -0.54
CBWD3-208ENST00000612050 JAK1P23458 1154 aa11.7□□□□□ -0.54
CBWD3-208ENST00000612050 TYK2P29597 1187 aa11.7□□□□□ -0.54
CBWD3-208ENST00000612050 BCL6P41182 706 aa11.7□□□□□ -0.54
CBWD3-208ENST00000612050 SERPINB9P50453 376 aa11.7□□□□□ -0.54
CBWD3-208ENST00000612050 STXBP1P61764 594 aaKnown RBP11.7□□□□□ -0.54
CBWD3-208ENST00000612050 MEF2AQ02078 507 aaPredicted RBP11.7□□□□□ -0.54
CBWD3-208ENST00000612050 KCNC4Q03721 635 aa11.7□□□□□ -0.54
CBWD3-208ENST00000612050 LAPTM5Q13571 262 aa11.7□□□□□ -0.54
CBWD3-208ENST00000612050 TRADDQ15628 312 aa11.7□□□□□ -0.54
CBWD3-208ENST00000612050 ZKSCAN8Q15776 578 aaPredicted RBP11.7□□□□□ -0.54
CBWD3-208ENST00000612050 MINDY4Q4G0A6 757 aa11.7□□□□□ -0.54
CBWD3-208ENST00000612050 VWA2Q5GFL6 755 aa11.7□□□□□ -0.54
CBWD3-208ENST00000612050 CATSPEREQ5SY80 951 aa11.7□□□□□ -0.54
CBWD3-208ENST00000612050 AGAP7PQ5VUJ5 663 aa11.7□□□□□ -0.54
CBWD3-208ENST00000612050 TMEM214Q6NUQ4 689 aaKnown RBP11.7□□□□□ -0.54
CBWD3-208ENST00000612050 NXPE4Q6UWF7 544 aa11.7□□□□□ -0.54
CBWD3-208ENST00000612050 RELL1Q8IUW5 271 aa11.7□□□□□ -0.54
CBWD3-208ENST00000612050 OR9A4Q8NGU2 314 aa11.7□□□□□ -0.54
CBWD3-208ENST00000612050 CCT6BQ92526 530 aa11.7□□□□□ -0.54
CBWD3-208ENST00000612050 KIAA1191Q96A73 305 aa11.7□□□□□ -0.54
CBWD3-208ENST00000612050 RHBDF1Q96CC6 855 aa11.7□□□□□ -0.54
CBWD3-208ENST00000612050 SEC16BQ96JE7 1060 aa11.7□□□□□ -0.54
CBWD3-208ENST00000612050 FAR2Q96K12 515 aa11.7□□□□□ -0.54
CBWD3-208ENST00000612050 AGAP4Q96P64 663 aa11.7□□□□□ -0.54
CBWD3-208ENST00000612050 SMAD5Q99717 465 aaKnown RBP11.7□□□□□ -0.54
CBWD3-208ENST00000612050 MCMBPQ9BTE3 642 aa11.7□□□□□ -0.54
CBWD3-208ENST00000612050 SARGQ9BW04 601 aa11.7□□□□□ -0.54
CBWD3-208ENST00000612050 MFRPQ9BY79 579 aa11.7□□□□□ -0.54
CBWD3-208ENST00000612050 DNAJC11Q9NVH1 559 aa11.7□□□□□ -0.54
CBWD3-208ENST00000612050 RIC8BQ9NVN3 520 aa11.7□□□□□ -0.54
CBWD3-208ENST00000612050 NUDT4Q9NZJ9 180 aa11.7□□□□□ -0.54
CBWD3-208ENST00000612050 MKL2Q9ULH7 1088 aa11.7□□□□□ -0.54
CBWD3-208ENST00000612050 ANGPTL3Q9Y5C1 460 aa11.7□□□□□ -0.54
CBWD3-208ENST00000612050 HS3ST3B1Q9Y662 390 aa11.7□□□□□ -0.54
CBWD3-208ENST00000612050 ATMQ13315 3056 aa11.7□□□□□ -0.54
CBWD3-208ENST00000612050 A0A087WUV0 522 aaPredicted RBP11.69□□□□□ -0.54
CBWD3-208ENST00000612050 CCNT2O60583 730 aaKnown RBP11.69□□□□□ -0.54
CBWD3-208ENST00000612050 CNOT3O75175 753 aaKnown RBP11.69□□□□□ -0.54
CBWD3-208ENST00000612050 WISP1O95388 367 aa11.69□□□□□ -0.54
CBWD3-208ENST00000612050 ACSL3O95573 720 aa11.69□□□□□ -0.54
CBWD3-208ENST00000612050 C8orf89P0DMQ9 161 aa11.69□□□□□ -0.54
CBWD3-208ENST00000612050 C1GALT1C1LP0DN25 315 aa11.69□□□□□ -0.54
CBWD3-208ENST00000612050 ALOX12P18054 663 aa11.69□□□□□ -0.54
CBWD3-208ENST00000612050 IL1RNP18510 177 aa11.69□□□□□ -0.54
CBWD3-208ENST00000612050 TFEBP19484 476 aa11.69□□□□□ -0.54
CBWD3-208ENST00000612050 CNTFP26441 200 aa11.69□□□□□ -0.54
CBWD3-208ENST00000612050 MSH2P43246 934 aa11.69□□□□□ -0.54
CBWD3-208ENST00000612050 AGTR2P50052 363 aa11.69□□□□□ -0.54
CBWD3-208ENST00000612050 CSRP3P50461 194 aa11.69□□□□□ -0.54
CBWD3-208ENST00000612050 SOX8P57073 446 aa11.69□□□□□ -0.54
CBWD3-208ENST00000612050 REEP5Q00765 189 aa11.69□□□□□ -0.54
CBWD3-208ENST00000612050 TGM3Q08188 693 aa11.69□□□□□ -0.54
CBWD3-208ENST00000612050 RAPSNQ13702 412 aa11.69□□□□□ -0.54
CBWD3-208ENST00000612050 PDK4Q16654 411 aa11.69□□□□□ -0.54
CBWD3-208ENST00000612050 MROH9Q5TGP6 573 aa11.69□□□□□ -0.54
CBWD3-208ENST00000612050 NDUFAF7Q7L592 441 aa11.69□□□□□ -0.54
CBWD3-208ENST00000612050 LRRC70Q7Z2Q7 622 aa11.69□□□□□ -0.54
CBWD3-208ENST00000612050 VN1R4Q7Z5H5 301 aa11.69□□□□□ -0.54
CBWD3-208ENST00000612050 SPNS2Q8IVW8 549 aa11.69□□□□□ -0.54
CBWD3-208ENST00000612050 KBTBD2Q8IY47 623 aa11.69□□□□□ -0.54
CBWD3-208ENST00000612050 NOA1Q8NC60 698 aaKnown RBP11.69□□□□□ -0.54
CBWD3-208ENST00000612050 OR51Q1Q8NH59 317 aa11.69□□□□□ -0.54
CBWD3-208ENST00000612050 UBE2E3Q969T4 207 aa11.69□□□□□ -0.54
CBWD3-208ENST00000612050 TM4SF19Q96DZ7 209 aa11.69□□□□□ -0.54
CBWD3-208ENST00000612050 OR4K3Q96R72 315 aa11.69□□□□□ -0.54
CBWD3-208ENST00000612050 NUDT9Q9BW91 350 aa11.69□□□□□ -0.54
CBWD3-208ENST00000612050 TRIM4Q9C037 500 aa11.69□□□□□ -0.54
CBWD3-208ENST00000612050 UNKQ9C0B0 810 aaKnown RBP11.69□□□□□ -0.54
CBWD3-208ENST00000612050 LHPPQ9H008 270 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms