RNA–Protein interactions for RNA: ENST00000611963.4

TARDBP-213, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 739 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-213ENST00000611963 LIMK1P53667 647 aa7.76□□□□□ -1.17
TARDBP-213ENST00000611963 UFM1P61960 85 aa7.76□□□□□ -1.17
TARDBP-213ENST00000611963 PPP1CAP62136 330 aa7.76□□□□□ -1.17
TARDBP-213ENST00000611963 KCNJ2P63252 427 aa7.76□□□□□ -1.17
TARDBP-213ENST00000611963 MXRA7P84157 204 aa7.76□□□□□ -1.17
TARDBP-213ENST00000611963 HHEXQ03014 270 aa7.76□□□□□ -1.17
TARDBP-213ENST00000611963 PRDX1Q06830 199 aaKnown RBP7.76□□□□□ -1.17
TARDBP-213ENST00000611963 BNIP3Q12983 259 aa7.76□□□□□ -1.17
TARDBP-213ENST00000611963 CSTF3Q12996 717 aaKnown RBP7.76□□□□□ -1.17
TARDBP-213ENST00000611963 LAPTM5Q13571 262 aa7.76□□□□□ -1.17
TARDBP-213ENST00000611963 CYLC2Q14093 348 aaPredicted RBP7.76□□□□□ -1.17
TARDBP-213ENST00000611963 GSTA3Q16772 222 aa7.76□□□□□ -1.17
TARDBP-213ENST00000611963 ZNF423Q2M1K9 1284 aa7.76□□□□□ -1.17
TARDBP-213ENST00000611963 PDCD4Q53EL6 469 aaKnown RBP7.76□□□□□ -1.17
TARDBP-213ENST00000611963 STPG1Q5TH74 334 aa7.76□□□□□ -1.17
TARDBP-213ENST00000611963 KIAA1614Q5VZ46 1190 aa7.76□□□□□ -1.17
TARDBP-213ENST00000611963 TMIGD1Q6UXZ0 262 aa7.76□□□□□ -1.17
TARDBP-213ENST00000611963 RIPOR1Q6ZS17 1223 aa7.76□□□□□ -1.17
TARDBP-213ENST00000611963 TMEM26Q6ZUK4 368 aa7.76□□□□□ -1.17
TARDBP-213ENST00000611963 ASRGL1Q7L266 308 aa7.76□□□□□ -1.17
TARDBP-213ENST00000611963 LAS2Q8IYD9 372 aa7.76□□□□□ -1.17
TARDBP-213ENST00000611963 LIX1Q8N485 282 aa7.76□□□□□ -1.17
TARDBP-213ENST00000611963 ANKRD53Q8N9V6 530 aa7.76□□□□□ -1.17
TARDBP-213ENST00000611963 KYQ8NBH2 561 aa7.76□□□□□ -1.17
TARDBP-213ENST00000611963 RBM15BQ8NDT2 890 aaKnown RBP7.76□□□□□ -1.17
TARDBP-213ENST00000611963 GPR156Q8NFN8 814 aa7.76□□□□□ -1.17
TARDBP-213ENST00000611963 ABHD11Q8NFV4 315 aa7.76□□□□□ -1.17
TARDBP-213ENST00000611963 OR2L3Q8NG85 312 aa7.76□□□□□ -1.17
TARDBP-213ENST00000611963 FLVCR1-AS1Q8TAF5 88 aa7.76□□□□□ -1.17
TARDBP-213ENST00000611963 NUDT8Q8WV74 236 aa7.76□□□□□ -1.17
TARDBP-213ENST00000611963 RCN3Q96D15 328 aa7.76□□□□□ -1.17
TARDBP-213ENST00000611963 REPS1Q96D71 796 aa7.76□□□□□ -1.17
TARDBP-213ENST00000611963 TEX37Q96LM6 180 aa7.76□□□□□ -1.17
TARDBP-213ENST00000611963 APOLD1Q96LR9 279 aa7.76□□□□□ -1.17
TARDBP-213ENST00000611963 PPM1MQ96MI6 270 aa7.76□□□□□ -1.17
TARDBP-213ENST00000611963 OR2A14Q96R47 310 aa7.76□□□□□ -1.17
TARDBP-213ENST00000611963 NPAS2Q99743 824 aa7.76□□□□□ -1.17
TARDBP-213ENST00000611963 EBPLQ9BY08 206 aa7.76□□□□□ -1.17
TARDBP-213ENST00000611963 MRPL1Q9BYD6 325 aaKnown RBP7.76□□□□□ -1.17
TARDBP-213ENST00000611963 BRINP2Q9C0B6 783 aa7.76□□□□□ -1.17
TARDBP-213ENST00000611963 LRMDAQ9H2I8 198 aa7.76□□□□□ -1.17
TARDBP-213ENST00000611963 BRF2Q9HAW0 419 aa7.76□□□□□ -1.17
TARDBP-213ENST00000611963 SDR39U1Q9NRG7 319 aaPredicted RBP7.76□□□□□ -1.17
TARDBP-213ENST00000611963 ACTR10Q9NZ32 417 aa7.76□□□□□ -1.17
TARDBP-213ENST00000611963 NOP53Q9NZM5 478 aaKnown RBP7.76□□□□□ -1.17
TARDBP-213ENST00000611963 VPS29Q9UBQ0 182 aa7.76□□□□□ -1.17
TARDBP-213ENST00000611963 BAIAP2L1Q9UHR4 511 aa7.76□□□□□ -1.17
TARDBP-213ENST00000611963 PILRBQ9UKJ0 227 aa7.76□□□□□ -1.17
TARDBP-213ENST00000611963 DLGAP4Q9Y2H0 992 aa7.76□□□□□ -1.17
TARDBP-213ENST00000611963 ASCC3Q8N3C0 2202 aaKnown RBP7.76□□□□□ -1.17
TARDBP-213ENST00000611963 NCOR2Q9Y618 2525 aa7.75□□□□□ -1.17
TARDBP-213ENST00000611963 TRBC2A0A5B9 178 aa7.75□□□□□ -1.17
TARDBP-213ENST00000611963 SAP18O00422 153 aaKnown RBP7.75□□□□□ -1.17
TARDBP-213ENST00000611963 FBP2O00757 339 aa7.75□□□□□ -1.17
TARDBP-213ENST00000611963 CDX4O14627 284 aaPredicted RBP7.75□□□□□ -1.17
TARDBP-213ENST00000611963 AIM2O14862 343 aa7.75□□□□□ -1.17
TARDBP-213ENST00000611963 PPM1DO15297 605 aa7.75□□□□□ -1.17
TARDBP-213ENST00000611963 OR1F1O43749 312 aa7.75□□□□□ -1.17
TARDBP-213ENST00000611963 LCMT2O60294 686 aaKnown RBP7.75□□□□□ -1.17
TARDBP-213ENST00000611963 HNRNPCL1O60812 293 aaKnown RBP7.75□□□□□ -1.17
TARDBP-213ENST00000611963 SLC22A3O75751 556 aa7.75□□□□□ -1.17
TARDBP-213ENST00000611963 CCNDBP1O95273 360 aa7.75□□□□□ -1.17
TARDBP-213ENST00000611963 TGFB1P01137 390 aa7.75□□□□□ -1.17
TARDBP-213ENST00000611963 CFIP05156 583 aa7.75□□□□□ -1.17
TARDBP-213ENST00000611963 SNRPB2P08579 225 aaKnown RBP7.75□□□□□ -1.17
TARDBP-213ENST00000611963 THRAP10827 490 aa7.75□□□□□ -1.17
TARDBP-213ENST00000611963 HSD3B1P14060 373 aa7.75□□□□□ -1.17
TARDBP-213ENST00000611963 NQO1P15559 274 aaKnown RBP7.75□□□□□ -1.17
TARDBP-213ENST00000611963 TYRP1P17643 537 aa7.75□□□□□ -1.17
TARDBP-213ENST00000611963 PRPH2P23942 346 aa7.75□□□□□ -1.17
TARDBP-213ENST00000611963 HSD3B2P26439 372 aa7.75□□□□□ -1.17
TARDBP-213ENST00000611963 CMPK1P30085 196 aa7.75□□□□□ -1.17
TARDBP-213ENST00000611963 BCL6P41182 706 aa7.75□□□□□ -1.17
TARDBP-213ENST00000611963 ZFP36L2P47974 494 aaKnown RBP7.75□□□□□ -1.17
TARDBP-213ENST00000611963 LSSP48449 732 aa7.75□□□□□ -1.17
TARDBP-213ENST00000611963 MRPL19P49406 292 aaKnown RBP7.75□□□□□ -1.17
TARDBP-213ENST00000611963 NUDT2P50583 147 aa7.75□□□□□ -1.17
TARDBP-213ENST00000611963 ABATP80404 500 aa7.75□□□□□ -1.17
TARDBP-213ENST00000611963 SLC25A3Q00325 362 aa7.75□□□□□ -1.17
TARDBP-213ENST00000611963 ZNF33BQ06732 778 aa7.75□□□□□ -1.17
TARDBP-213ENST00000611963 CYP4F3Q08477 520 aa7.75□□□□□ -1.17
TARDBP-213ENST00000611963 PTGR1Q14914 329 aa7.75□□□□□ -1.17
TARDBP-213ENST00000611963 KIR2DS3Q14952 304 aa7.75□□□□□ -1.17
TARDBP-213ENST00000611963 KIAA0040Q15053 153 aa7.75□□□□□ -1.17
TARDBP-213ENST00000611963 SHBQ15464 509 aa7.75□□□□□ -1.17
TARDBP-213ENST00000611963 SMU1Q2TAY7 513 aa7.75□□□□□ -1.17
TARDBP-213ENST00000611963 CHCHD2P9Q5T1J5 151 aaPredicted RBP7.75□□□□□ -1.17
TARDBP-213ENST00000611963 CACHD1Q5VU97 1274 aa7.75□□□□□ -1.17
TARDBP-213ENST00000611963 PEAR1Q5VY43 1037 aaPredicted RBP7.75□□□□□ -1.17
TARDBP-213ENST00000611963 REP15Q6BDI9 236 aa7.75□□□□□ -1.17
TARDBP-213ENST00000611963 ARL14Q8N4G2 192 aa7.75□□□□□ -1.17
TARDBP-213ENST00000611963 KRTCAP2Q8N6L1 136 aa7.75□□□□□ -1.17
TARDBP-213ENST00000611963 C1orf52Q8N6N3 182 aaKnown RBP7.75□□□□□ -1.17
TARDBP-213ENST00000611963 ZNF511Q8NB15 262 aa7.75□□□□□ -1.17
TARDBP-213ENST00000611963 OR4K1Q8NGD4 311 aa7.75□□□□□ -1.17
TARDBP-213ENST00000611963 CDC26Q8NHZ8 85 aa7.75□□□□□ -1.17
TARDBP-213ENST00000611963 RP9Q8TA86 221 aaKnown RBP7.75□□□□□ -1.17
TARDBP-213ENST00000611963 WDR48Q8TAF3 677 aa7.75□□□□□ -1.17
TARDBP-213ENST00000611963 ZFPM2Q8WW38 1151 aa7.75□□□□□ -1.17
TARDBP-213ENST00000611963 RSC1A1Q92681 617 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms