RNA–Protein interactions for RNA: ENST00000610828.4

NEK3-205, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK3, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-205ENST00000610828 EID3Q8N140 333 aa13.1□□□□□ -0.31
NEK3-205ENST00000610828 ZCCHC7Q8N3Z6 543 aaKnown RBP13.1□□□□□ -0.31
NEK3-205ENST00000610828 SVOPLQ8N434 492 aa13.1□□□□□ -0.31
NEK3-205ENST00000610828 NCSTNQ92542 709 aa13.1□□□□□ -0.31
NEK3-205ENST00000610828 RBM38Q9H0Z9 239 aaKnown RBP13.1□□□□□ -0.31
NEK3-205ENST00000610828 RSPH9Q9H1X1 276 aaPredicted RBP13.1□□□□□ -0.31
NEK3-205ENST00000610828 MBNL1Q9NR56 388 aaKnown RBP13.1□□□□□ -0.31
NEK3-205ENST00000610828 DMTF1Q9Y222 760 aa13.1□□□□□ -0.31
NEK3-205ENST00000610828 EYSQ5T1H1 3165 aa13.1□□□□□ -0.31
NEK3-205ENST00000610828 ATG2BQ96BY7 2078 aa13.1□□□□□ -0.31
NEK3-205ENST00000610828 DOCK9Q9BZ29 2069 aa13.1□□□□□ -0.31
NEK3-205ENST00000610828 PRR23AA6NEV1 266 aa13.09□□□□□ -0.31
NEK3-205ENST00000610828 NTRK1P04629 796 aa13.09□□□□□ -0.31
NEK3-205ENST00000610828 IL1RNP18510 177 aa13.09□□□□□ -0.31
NEK3-205ENST00000610828 SEC13P55735 322 aa13.09□□□□□ -0.31
NEK3-205ENST00000610828 TUBA4AP68366 448 aa13.09□□□□□ -0.31
NEK3-205ENST00000610828 C16orf72Q14CZ0 275 aa13.09□□□□□ -0.31
NEK3-205ENST00000610828 IER5LQ5T953 404 aa13.09□□□□□ -0.31
NEK3-205ENST00000610828 USP51Q70EK9 711 aa13.09□□□□□ -0.31
NEK3-205ENST00000610828 CAMKMTQ7Z624 323 aa13.09□□□□□ -0.31
NEK3-205ENST00000610828 WDR48Q8TAF3 677 aa13.09□□□□□ -0.31
NEK3-205ENST00000610828 SETD7Q8WTS6 366 aaKnown RBP13.09□□□□□ -0.31
NEK3-205ENST00000610828 KLK6Q92876 244 aa13.09□□□□□ -0.31
NEK3-205ENST00000610828 POP5Q969H6 163 aaKnown RBP13.09□□□□□ -0.31
NEK3-205ENST00000610828 RPP25Q9BUL9 199 aaKnown RBP13.09□□□□□ -0.31
NEK3-205ENST00000610828 BTNL2Q9UIR0 455 aa13.09□□□□□ -0.31
NEK3-205ENST00000610828 FZD4Q9ULV1 537 aa13.09□□□□□ -0.31
NEK3-205ENST00000610828 CEP290O15078 2479 aa13.09□□□□□ -0.31
NEK3-205ENST00000610828 A0A087WXM4 84 aa13.09□□□□□ -0.31
NEK3-205ENST00000610828 PAK4O96013 591 aaPredicted RBP13.09□□□□□ -0.31
NEK3-205ENST00000610828 HPRP00739 348 aa13.09□□□□□ -0.31
NEK3-205ENST00000610828 TIE1P35590 1138 aa13.09□□□□□ -0.31
NEK3-205ENST00000610828 ITPRIPL2Q3MIP1 535 aa13.09□□□□□ -0.31
NEK3-205ENST00000610828 ZNF385BQ569K4 471 aa13.09□□□□□ -0.31
NEK3-205ENST00000610828 CPZQ66K79 652 aa13.09□□□□□ -0.31
NEK3-205ENST00000610828 ERICH5Q6P6B1 374 aa13.09□□□□□ -0.31
NEK3-205ENST00000610828 LCTLQ6UWM7 567 aa13.09□□□□□ -0.31
NEK3-205ENST00000610828 ANGPTL8Q6UXH0 198 aa13.09□□□□□ -0.31
NEK3-205ENST00000610828 TMIGD1Q6UXZ0 262 aa13.09□□□□□ -0.31
NEK3-205ENST00000610828 PTOV1Q86YD1 416 aa13.09□□□□□ -0.31
NEK3-205ENST00000610828 ZDHHC21Q8IVQ6 265 aa13.09□□□□□ -0.31
NEK3-205ENST00000610828 OR4K1Q8NGD4 311 aa13.09□□□□□ -0.31
NEK3-205ENST00000610828 OR4A15Q8NGL6 344 aa13.09□□□□□ -0.31
NEK3-205ENST00000610828 OR5K2Q8NHB8 316 aa13.09□□□□□ -0.31
NEK3-205ENST00000610828 TMIGD2Q96BF3 282 aa13.09□□□□□ -0.31
NEK3-205ENST00000610828 COQ8BQ96D53 544 aa13.09□□□□□ -0.31
NEK3-205ENST00000610828 MUS81Q96NY9 551 aa13.09□□□□□ -0.31
NEK3-205ENST00000610828 OSBPL10Q9BXB5 764 aa13.09□□□□□ -0.31
NEK3-205ENST00000610828 TOR3AQ9H497 397 aa13.09□□□□□ -0.31
NEK3-205ENST00000610828 REEP4Q9H6H4 257 aa13.09□□□□□ -0.31
NEK3-205ENST00000610828 WDR26Q9H7D7 661 aa13.09□□□□□ -0.31
NEK3-205ENST00000610828 EXO1Q9UQ84 846 aaKnown RBP13.09□□□□□ -0.31
NEK3-205ENST00000610828 H3BSA7 217 aa13.08□□□□□ -0.32
NEK3-205ENST00000610828 ADH1BP00325 375 aa13.08□□□□□ -0.32
NEK3-205ENST00000610828 KLK1P06870 262 aa13.08□□□□□ -0.32
NEK3-205ENST00000610828 PRKACGP22612 351 aa13.08□□□□□ -0.32
NEK3-205ENST00000610828 PHEXP78562 749 aa13.08□□□□□ -0.32
NEK3-205ENST00000610828 MC1RQ01726 317 aa13.08□□□□□ -0.32
NEK3-205ENST00000610828 GAB1Q13480 694 aa13.08□□□□□ -0.32
NEK3-205ENST00000610828 METRNLQ641Q3 311 aa13.08□□□□□ -0.32
NEK3-205ENST00000610828 CHST15Q7LFX5 561 aaPredicted RBP13.08□□□□□ -0.32
NEK3-205ENST00000610828 GPR155Q7Z3F1 870 aa13.08□□□□□ -0.32
NEK3-205ENST00000610828 TMEM179BQ7Z7N9 219 aa13.08□□□□□ -0.32
NEK3-205ENST00000610828 UBE2E3Q969T4 207 aa13.08□□□□□ -0.32
NEK3-205ENST00000610828 RBM4BQ9BQ04 359 aaKnown RBP13.08□□□□□ -0.32
NEK3-205ENST00000610828 RBM4Q9BWF3 364 aaKnown RBP13.08□□□□□ -0.32
NEK3-205ENST00000610828 TAC3Q9UHF0 121 aa13.08□□□□□ -0.32
NEK3-205ENST00000610828 C1orf226A1L170 272 aa13.08□□□□□ -0.32
NEK3-205ENST00000610828 RNASET2O00584 256 aaKnown RBP13.08□□□□□ -0.32
NEK3-205ENST00000610828 HS6ST1O60243 411 aa13.08□□□□□ -0.32
NEK3-205ENST00000610828 RPN2P04844 631 aa13.08□□□□□ -0.32
NEK3-205ENST00000610828 NUDT7P0C024 238 aa13.08□□□□□ -0.32
NEK3-205ENST00000610828 HOXB6P17509 224 aaKnown RBP13.08□□□□□ -0.32
NEK3-205ENST00000610828 C5AR1P21730 350 aa13.08□□□□□ -0.32
NEK3-205ENST00000610828 KDELR2P33947 212 aa13.08□□□□□ -0.32
NEK3-205ENST00000610828 DCTP40126 519 aa13.08□□□□□ -0.32
NEK3-205ENST00000610828 PIK3CBP42338 1070 aa13.08□□□□□ -0.32
NEK3-205ENST00000610828 MAGEA10P43363 369 aaPredicted RBP13.08□□□□□ -0.32
NEK3-205ENST00000610828 PPP2R2BQ00005 443 aa13.08□□□□□ -0.32
NEK3-205ENST00000610828 ANKRD34AQ69YU3 496 aa13.08□□□□□ -0.32
NEK3-205ENST00000610828 ANKRD54Q6NXT1 300 aa13.08□□□□□ -0.32
NEK3-205ENST00000610828 FKBP9P1Q75LS8 142 aa13.08□□□□□ -0.32
NEK3-205ENST00000610828 KRT78Q8N1N4 520 aa13.08□□□□□ -0.32
NEK3-205ENST00000610828 OR5K1Q8NHB7 308 aa13.08□□□□□ -0.32
NEK3-205ENST00000610828 GANCQ8TET4 914 aa13.08□□□□□ -0.32
NEK3-205ENST00000610828 CXorf40BQ96DE9 158 aa13.08□□□□□ -0.32
NEK3-205ENST00000610828 PHF12Q96QT6 1004 aa13.08□□□□□ -0.32
NEK3-205ENST00000610828 TRMT61BQ9BVS5 477 aaKnown RBP13.08□□□□□ -0.32
NEK3-205ENST00000610828 BHLHE41Q9C0J9 482 aaPredicted RBP13.08□□□□□ -0.32
NEK3-205ENST00000610828 ATAD3AQ9NVI7 634 aa13.08□□□□□ -0.32
NEK3-205ENST00000610828 SPASTQ9UBP0 616 aa13.08□□□□□ -0.32
NEK3-205ENST00000610828 VPS4AQ9UN37 437 aa13.08□□□□□ -0.32
NEK3-205ENST00000610828 KMOO15229 486 aa13.07□□□□□ -0.32
NEK3-205ENST00000610828 BMP10O95393 424 aa13.07□□□□□ -0.32
NEK3-205ENST00000610828 SLC35G4P0C7Q5 338 aa13.07□□□□□ -0.32
NEK3-205ENST00000610828 ALDH3B2P48448 385 aa13.07□□□□□ -0.32
NEK3-205ENST00000610828 CLCNKAP51800 687 aa13.07□□□□□ -0.32
NEK3-205ENST00000610828 TAS2R50P59544 299 aa13.07□□□□□ -0.32
NEK3-205ENST00000610828 C2orf80Q0P641 193 aa13.07□□□□□ -0.32
NEK3-205ENST00000610828 HYAL1Q12794 435 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms