RNA–Protein interactions for RNA: ENST00000608287.1

SGMS1-208, Transcript of sphingomyelin synthase 1, humanhuman

TSL 4

Gene SGMS1, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-208ENST00000608287 TBPL1P62380 186 aa18.27■□□□□ 0.52
SGMS1-208ENST00000608287 ABATP80404 500 aa18.27■□□□□ 0.52
SGMS1-208ENST00000608287 ZNF460Q14592 562 aa18.27■□□□□ 0.52
SGMS1-208ENST00000608287 NKAIN1Q4KMZ8 207 aa18.27■□□□□ 0.52
SGMS1-208ENST00000608287 FBXO42Q6P3S6 717 aa18.27■□□□□ 0.52
SGMS1-208ENST00000608287 AGTRAPQ6RW13 159 aa18.27■□□□□ 0.52
SGMS1-208ENST00000608287 TMEM207Q6UWW9 146 aa18.27■□□□□ 0.52
SGMS1-208ENST00000608287 CYS1Q717R9 158 aa18.27■□□□□ 0.52
SGMS1-208ENST00000608287 PAQR7Q86WK9 346 aa18.27■□□□□ 0.52
SGMS1-208ENST00000608287 CTAGE3PQ8IX95 158 aa18.27■□□□□ 0.52
SGMS1-208ENST00000608287 MMGT1Q8N4V1 131 aa18.27■□□□□ 0.52
SGMS1-208ENST00000608287 NKAPQ8N5F7 415 aaKnown RBP18.27■□□□□ 0.52
SGMS1-208ENST00000608287 KIF18AQ8NI77 898 aa18.27■□□□□ 0.52
SGMS1-208ENST00000608287 CHTF18Q8WVB6 975 aa18.27■□□□□ 0.52
SGMS1-208ENST00000608287 CCDC120Q96HB5 630 aa18.27■□□□□ 0.52
SGMS1-208ENST00000608287 ZNF285Q96NJ3 590 aa18.27■□□□□ 0.52
SGMS1-208ENST00000608287 TRIM54Q9BYV2 358 aa18.27■□□□□ 0.52
SGMS1-208ENST00000608287 ATG10Q9H0Y0 220 aa18.27■□□□□ 0.52
SGMS1-208ENST00000608287 CUTCQ9NTM9 273 aa18.27■□□□□ 0.52
SGMS1-208ENST00000608287 ARL15Q9NXU5 204 aa18.27■□□□□ 0.52
SGMS1-208ENST00000608287 CSAG2Q9Y5P2 127 aa18.27■□□□□ 0.52
SGMS1-208ENST00000608287 DOCK10Q96BY6 2186 aa18.27■□□□□ 0.51
SGMS1-208ENST00000608287 CCDC88CQ9P219 2028 aa18.27■□□□□ 0.51
SGMS1-208ENST00000608287 LOC105369274A0A096LPK9 316 aa18.26■□□□□ 0.51
SGMS1-208ENST00000608287 LOC102723532A0A0G2JNH3 316 aa18.26■□□□□ 0.51
SGMS1-208ENST00000608287 A0A1B0GX78 115 aa18.26■□□□□ 0.51
SGMS1-208ENST00000608287 CTAGE15A4D2H0 777 aa18.26■□□□□ 0.51
SGMS1-208ENST00000608287 FAM159BA6NKW6 160 aa18.26■□□□□ 0.51
SGMS1-208ENST00000608287 CCL21O00585 134 aa18.26■□□□□ 0.51
SGMS1-208ENST00000608287 CTAGE8P0CG41 777 aa18.26■□□□□ 0.51
SGMS1-208ENST00000608287 MMP11P24347 488 aa18.26■□□□□ 0.51
SGMS1-208ENST00000608287 GCGRP47871 477 aa18.26■□□□□ 0.51
SGMS1-208ENST00000608287 SMSP52788 366 aa18.26■□□□□ 0.51
SGMS1-208ENST00000608287 ILF2Q12905 390 aaKnown RBP18.26■□□□□ 0.51
SGMS1-208ENST00000608287 NAE1Q13564 534 aa18.26■□□□□ 0.51
SGMS1-208ENST00000608287 FAM214AQ32MH5 1076 aa18.26■□□□□ 0.51
SGMS1-208ENST00000608287 YOD1Q5VVQ6 348 aaPredicted RBP18.26■□□□□ 0.51
SGMS1-208ENST00000608287 GFRALQ6UXV0 394 aa18.26■□□□□ 0.51
SGMS1-208ENST00000608287 CTAGE6Q86UF2 777 aa18.26■□□□□ 0.51
SGMS1-208ENST00000608287 CTAGE4Q8IX94 777 aa18.26■□□□□ 0.51
SGMS1-208ENST00000608287 OR4N4Q8N0Y3 316 aa18.26■□□□□ 0.51
SGMS1-208ENST00000608287 NOA1Q8NC60 698 aaKnown RBP18.26■□□□□ 0.51
SGMS1-208ENST00000608287 NR4A3Q92570 626 aa18.26■□□□□ 0.51
SGMS1-208ENST00000608287 PDLIM5Q96HC4 596 aaKnown RBP18.26■□□□□ 0.51
SGMS1-208ENST00000608287 CPNE1Q99829 537 aa18.26■□□□□ 0.51
SGMS1-208ENST00000608287 MCMBPQ9BTE3 642 aa18.26■□□□□ 0.51
SGMS1-208ENST00000608287 LHPPQ9H008 270 aa18.26■□□□□ 0.51
SGMS1-208ENST00000608287 GPAMQ9HCL2 828 aa18.26■□□□□ 0.51
SGMS1-208ENST00000608287 MTO1Q9Y2Z2 717 aaKnown RBP18.26■□□□□ 0.51
SGMS1-208ENST00000608287 HEATR5BQ9P2D3 2071 aa18.26■□□□□ 0.51
SGMS1-208ENST00000608287 H0YGG7 62 aa18.25■□□□□ 0.51
SGMS1-208ENST00000608287 DSCR3O14972 297 aa18.25■□□□□ 0.51
SGMS1-208ENST00000608287 EZRP15311 586 aaKnown RBP18.25■□□□□ 0.51
SGMS1-208ENST00000608287 AP1S2P56377 157 aa18.25■□□□□ 0.51
SGMS1-208ENST00000608287 ARF3P61204 181 aaPredicted RBP18.25■□□□□ 0.51
SGMS1-208ENST00000608287 ZNF425Q6IV72 752 aa18.25■□□□□ 0.51
SGMS1-208ENST00000608287 MRPL14Q6P1L8 145 aaKnown RBP18.25■□□□□ 0.51
SGMS1-208ENST00000608287 ISLR2Q6UXK2 745 aa18.25■□□□□ 0.51
SGMS1-208ENST00000608287 CEP97Q8IW35 865 aa18.25■□□□□ 0.51
SGMS1-208ENST00000608287 MAGEB10Q96LZ2 347 aaPredicted RBP18.25■□□□□ 0.51
SGMS1-208ENST00000608287 LMF1Q96S06 567 aa18.25■□□□□ 0.51
SGMS1-208ENST00000608287 RBBP8Q99708 897 aa18.25■□□□□ 0.51
SGMS1-208ENST00000608287 PCBD2Q9H0N5 130 aa18.25■□□□□ 0.51
SGMS1-208ENST00000608287 ZDHHC18Q9NUE0 388 aa18.25■□□□□ 0.51
SGMS1-208ENST00000608287 FBXL4Q9UKA2 621 aa18.25■□□□□ 0.51
SGMS1-208ENST00000608287 IKZF3Q9UKT9 509 aa18.25■□□□□ 0.51
SGMS1-208ENST00000608287 AKAP9Q99996 3911 aa18.24■□□□□ 0.51
SGMS1-208ENST00000608287 DYTNA2CJ06 578 aa18.24■□□□□ 0.51
SGMS1-208ENST00000608287 HYKKA2RU49 373 aa18.24■□□□□ 0.51
SGMS1-208ENST00000608287 FITM1A5D6W6 292 aa18.24■□□□□ 0.51
SGMS1-208ENST00000608287 NPEPPSL1A6NEC2 478 aa18.24■□□□□ 0.51
SGMS1-208ENST00000608287 H7BY64 318 aa18.24■□□□□ 0.51
SGMS1-208ENST00000608287 CDC7O00311 574 aa18.24■□□□□ 0.51
SGMS1-208ENST00000608287 HAT1O14929 419 aa18.24■□□□□ 0.51
SGMS1-208ENST00000608287 GUCA1CO95843 209 aa18.24■□□□□ 0.51
SGMS1-208ENST00000608287 ENO2P09104 434 aaPredicted RBP18.24■□□□□ 0.51
SGMS1-208ENST00000608287 PIM1P11309 404 aaPredicted RBP18.24■□□□□ 0.51
SGMS1-208ENST00000608287 CCND1P24385 295 aa18.24■□□□□ 0.51
SGMS1-208ENST00000608287 STX2P32856 288 aa18.24■□□□□ 0.51
SGMS1-208ENST00000608287 GP5P40197 560 aa18.24■□□□□ 0.51
SGMS1-208ENST00000608287 POU4F1Q01851 419 aa18.24■□□□□ 0.51
SGMS1-208ENST00000608287 USP10Q14694 798 aaKnown RBP18.24■□□□□ 0.51
SGMS1-208ENST00000608287 KBTBD12Q3ZCT8 623 aa18.24■□□□□ 0.51
SGMS1-208ENST00000608287 METTL27Q8N6F8 245 aaPredicted RBP18.24■□□□□ 0.51
SGMS1-208ENST00000608287 PPM1NQ8N819 430 aa18.24■□□□□ 0.51
SGMS1-208ENST00000608287 FBF1Q8TES7 1133 aa18.24■□□□□ 0.51
SGMS1-208ENST00000608287 RERGQ96A58 199 aaPredicted RBP18.24■□□□□ 0.51
SGMS1-208ENST00000608287 FKBP10Q96AY3 582 aa18.24■□□□□ 0.51
SGMS1-208ENST00000608287 TSPAN17Q96FV3 270 aa18.24■□□□□ 0.51
SGMS1-208ENST00000608287 PRAP1Q96NZ9 151 aa18.24■□□□□ 0.51
SGMS1-208ENST00000608287 CAB39LQ9H9S4 337 aa18.24■□□□□ 0.51
SGMS1-208ENST00000608287 POPDC3Q9HBV1 291 aa18.24■□□□□ 0.51
SGMS1-208ENST00000608287 ENAMQ9NRM1 1142 aa18.24■□□□□ 0.51
SGMS1-208ENST00000608287 DMGDHQ9UI17 866 aaKnown RBP18.24■□□□□ 0.51
SGMS1-208ENST00000608287 CRYABP02511 175 aaKnown RBP18.23■□□□□ 0.51
SGMS1-208ENST00000608287 C1QAP02745 245 aa18.23■□□□□ 0.51
SGMS1-208ENST00000608287 ITGAXP20702 1163 aa18.23■□□□□ 0.51
SGMS1-208ENST00000608287 CA7P43166 264 aa18.23■□□□□ 0.51
SGMS1-208ENST00000608287 TDGF1P3P51864 188 aa18.23■□□□□ 0.51
SGMS1-208ENST00000608287 KCNK10P57789 538 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms