RNA–Protein interactions for RNA: ENST00000604929.1

TUBB4B-202, Transcript of tubulin beta 4B class IVb, humanhuman

TSL 1 (best)

Gene TUBB4B, Length 2,035 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4B-202ENST00000604929 HOXB3P14651 431 aaPredicted RBP18.4■□□□□ 0.54
TUBB4B-202ENST00000604929 EFNA1P20827 205 aaPredicted RBP18.4■□□□□ 0.54
TUBB4B-202ENST00000604929 NDUFS1P28331 727 aa18.4■□□□□ 0.54
TUBB4B-202ENST00000604929 KIR3DL1P43629 444 aa18.4■□□□□ 0.54
TUBB4B-202ENST00000604929 GSK3BP49841 420 aa18.4■□□□□ 0.54
TUBB4B-202ENST00000604929 PRRT3Q5FWE3 981 aa18.4■□□□□ 0.54
TUBB4B-202ENST00000604929 DHFR2Q86XF0 187 aa18.4■□□□□ 0.54
TUBB4B-202ENST00000604929 TRIM48Q8IWZ4 208 aa18.4■□□□□ 0.54
TUBB4B-202ENST00000604929 OR2L3Q8NG85 312 aa18.4■□□□□ 0.54
TUBB4B-202ENST00000604929 MACROD1Q9BQ69 325 aa18.4■□□□□ 0.54
TUBB4B-202ENST00000604929 DPH7Q9BTV6 452 aa18.4■□□□□ 0.54
TUBB4B-202ENST00000604929 THUMPD3Q9BV44 507 aaKnown RBP18.4■□□□□ 0.54
TUBB4B-202ENST00000604929 REXO4Q9GZR2 422 aaKnown RBP18.4■□□□□ 0.54
TUBB4B-202ENST00000604929 RHBGQ9H310 441 aa18.4■□□□□ 0.54
TUBB4B-202ENST00000604929 SLC25A37Q9NYZ2 338 aa18.4■□□□□ 0.54
TUBB4B-202ENST00000604929 NIPSNAP3AQ9UFN0 247 aaPredicted RBP18.4■□□□□ 0.54
TUBB4B-202ENST00000604929 NUP214P35658 2090 aaPredicted RBP18.4■□□□□ 0.54
TUBB4B-202ENST00000604929 H3BNX3 289 aa18.39■□□□□ 0.53
TUBB4B-202ENST00000604929 MAP3K13O43283 966 aa18.39■□□□□ 0.53
TUBB4B-202ENST00000604929 KDM1AO60341 852 aa18.39■□□□□ 0.53
TUBB4B-202ENST00000604929 CHRM5P08912 532 aaPredicted RBP18.39■□□□□ 0.53
TUBB4B-202ENST00000604929 LAMP1P11279 417 aa18.39■□□□□ 0.53
TUBB4B-202ENST00000604929 REEP5Q00765 189 aa18.39■□□□□ 0.53
TUBB4B-202ENST00000604929 KIAA1614Q5VZ46 1190 aa18.39■□□□□ 0.53
TUBB4B-202ENST00000604929 CLDN23Q96B33 292 aa18.39■□□□□ 0.53
TUBB4B-202ENST00000604929 GSDMCQ9BYG8 508 aa18.39■□□□□ 0.53
TUBB4B-202ENST00000604929 SLC6A20Q9NP91 592 aa18.39■□□□□ 0.53
TUBB4B-202ENST00000604929 SERHLQ9NQF3 203 aa18.39■□□□□ 0.53
TUBB4B-202ENST00000604929 PCDHB14Q9Y5E9 798 aa18.39■□□□□ 0.53
TUBB4B-202ENST00000604929 C19orf67A6NJJ6 358 aa18.39■□□□□ 0.53
TUBB4B-202ENST00000604929 KLHL18O94889 574 aa18.39■□□□□ 0.53
TUBB4B-202ENST00000604929 VIPP01282 170 aa18.39■□□□□ 0.53
TUBB4B-202ENST00000604929 HSD17B1P14061 328 aa18.39■□□□□ 0.53
TUBB4B-202ENST00000604929 CD27P26842 260 aa18.39■□□□□ 0.53
TUBB4B-202ENST00000604929 SHMT2P34897 504 aa18.39■□□□□ 0.53
TUBB4B-202ENST00000604929 CDKN2CP42773 168 aa18.39■□□□□ 0.53
TUBB4B-202ENST00000604929 CXCL12P48061 93 aa18.39■□□□□ 0.53
TUBB4B-202ENST00000604929 MC1RQ01726 317 aa18.39■□□□□ 0.53
TUBB4B-202ENST00000604929 TRAP1Q12931 704 aaKnown RBP18.39■□□□□ 0.53
TUBB4B-202ENST00000604929 GPR18Q14330 331 aa18.39■□□□□ 0.53
TUBB4B-202ENST00000604929 GALNT18Q6P9A2 607 aa18.39■□□□□ 0.53
TUBB4B-202ENST00000604929 SPPL2CQ8IUH8 684 aa18.39■□□□□ 0.53
TUBB4B-202ENST00000604929 MSRB3Q8IXL7 192 aa18.39■□□□□ 0.53
TUBB4B-202ENST00000604929 METTL4Q8N3J2 472 aa18.39■□□□□ 0.53
TUBB4B-202ENST00000604929 MIEF2Q96C03 454 aa18.39■□□□□ 0.53
TUBB4B-202ENST00000604929 AURKBQ96GD4 344 aaPredicted RBP18.39■□□□□ 0.53
TUBB4B-202ENST00000604929 ANKRD27Q96NW4 1050 aa18.39■□□□□ 0.53
TUBB4B-202ENST00000604929 KCTD14Q9BQ13 255 aaPredicted RBP18.39■□□□□ 0.53
TUBB4B-202ENST00000604929 GPR27Q9NS67 375 aa18.39■□□□□ 0.53
TUBB4B-202ENST00000604929 OR6C2Q9NZP2 312 aa18.39■□□□□ 0.53
TUBB4B-202ENST00000604929 ANGPTL2Q9UKU9 493 aa18.39■□□□□ 0.53
TUBB4B-202ENST00000604929 TSC22D4Q9Y3Q8 395 aa18.39■□□□□ 0.53
TUBB4B-202ENST00000604929 NEUROG3Q9Y4Z2 214 aa18.39■□□□□ 0.53
TUBB4B-202ENST00000604929 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.38■□□□□ 0.53
TUBB4B-202ENST00000604929 YY2O15391 372 aa18.38■□□□□ 0.53
TUBB4B-202ENST00000604929 SNRNP200O75643 2136 aaKnown RBP18.38■□□□□ 0.53
TUBB4B-202ENST00000604929 PIM1P11309 404 aaPredicted RBP18.38■□□□□ 0.53
TUBB4B-202ENST00000604929 NCK1P16333 377 aa18.38■□□□□ 0.53
TUBB4B-202ENST00000604929 JUNDP17535 347 aa18.38■□□□□ 0.53
TUBB4B-202ENST00000604929 CD38P28907 300 aa18.38■□□□□ 0.53
TUBB4B-202ENST00000604929 NUDT1P36639 197 aa18.38■□□□□ 0.53
TUBB4B-202ENST00000604929 DEPDC1Q5TB30 811 aa18.38■□□□□ 0.53
TUBB4B-202ENST00000604929 KHDRBS2Q5VWX1 349 aaKnown RBP18.38■□□□□ 0.53
TUBB4B-202ENST00000604929 LRRC74BQ6ZQY2 392 aa18.38■□□□□ 0.53
TUBB4B-202ENST00000604929 PARGQ86W56 976 aa18.38■□□□□ 0.53
TUBB4B-202ENST00000604929 UBALD2Q8IYN6 164 aa18.38■□□□□ 0.53
TUBB4B-202ENST00000604929 TMEFF1Q8IYR6 380 aa18.38■□□□□ 0.53
TUBB4B-202ENST00000604929 ADGRF3Q8IZF5 1079 aa18.38■□□□□ 0.53
TUBB4B-202ENST00000604929 RSRC1Q96IZ7 334 aaKnown RBP18.38■□□□□ 0.53
TUBB4B-202ENST00000604929 IKZF5Q9H5V7 419 aa18.38■□□□□ 0.53
TUBB4B-202ENST00000604929 RMND5AQ9H871 391 aa18.38■□□□□ 0.53
TUBB4B-202ENST00000604929 SH3BP4Q9P0V3 963 aa18.38■□□□□ 0.53
TUBB4B-202ENST00000604929 PLPP1O14494 284 aa18.37■□□□□ 0.53
TUBB4B-202ENST00000604929 HAT1O14929 419 aa18.37■□□□□ 0.53
TUBB4B-202ENST00000604929 GRIA3P42263 894 aa18.37■□□□□ 0.53
TUBB4B-202ENST00000604929 ASMTP46597 345 aa18.37■□□□□ 0.53
TUBB4B-202ENST00000604929 TAS2R50P59544 299 aa18.37■□□□□ 0.53
TUBB4B-202ENST00000604929 SRSF11Q05519 484 aaKnown RBP18.37■□□□□ 0.53
TUBB4B-202ENST00000604929 SLC9B2Q86UD5 537 aa18.37■□□□□ 0.53
TUBB4B-202ENST00000604929 CAMKK1Q8N5S9 505 aa18.37■□□□□ 0.53
TUBB4B-202ENST00000604929 FAM46DQ8NEK8 389 aa18.37■□□□□ 0.53
TUBB4B-202ENST00000604929 OR10G6Q8NH81 332 aa18.37■□□□□ 0.53
TUBB4B-202ENST00000604929 ITCHQ96J02 903 aa18.37■□□□□ 0.53
TUBB4B-202ENST00000604929 LRGUKQ96M69 825 aa18.37■□□□□ 0.53
TUBB4B-202ENST00000604929 HSPA12BQ96MM6 686 aa18.37■□□□□ 0.53
TUBB4B-202ENST00000604929 ECSITQ9BQ95 431 aa18.37■□□□□ 0.53
TUBB4B-202ENST00000604929 MS4A8Q9BY19 250 aa18.37■□□□□ 0.53
TUBB4B-202ENST00000604929 PAIP1Q9H074 479 aaKnown RBP18.37■□□□□ 0.53
TUBB4B-202ENST00000604929 KCNH6Q9H252 994 aa18.37■□□□□ 0.53
TUBB4B-202ENST00000604929 CPNE7Q9UBL6 633 aa18.37■□□□□ 0.53
TUBB4B-202ENST00000604929 APOBEC3BQ9UH17 382 aaKnown RBP18.37■□□□□ 0.53
TUBB4B-202ENST00000604929 EXO1Q9UQ84 846 aaKnown RBP18.37■□□□□ 0.53
TUBB4B-202ENST00000604929 LRP4O75096 1905 aa18.37■□□□□ 0.53
TUBB4B-202ENST00000604929 RFXANKO14593 260 aa18.37■□□□□ 0.53
TUBB4B-202ENST00000604929 SCAMP2O15127 329 aaKnown RBP18.37■□□□□ 0.53
TUBB4B-202ENST00000604929 STAMBPO95630 424 aa18.37■□□□□ 0.53
TUBB4B-202ENST00000604929 CPSF4O95639 269 aaKnown RBP18.37■□□□□ 0.53
TUBB4B-202ENST00000604929 GRK3P35626 688 aa18.37■□□□□ 0.53
TUBB4B-202ENST00000604929 WNT3P56703 355 aa18.37■□□□□ 0.53
TUBB4B-202ENST00000604929 DMWDQ09019 674 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms