RNA–Protein interactions for RNA: ENST00000602837.1

UBE2E3-211, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

TSL 3

Gene UBE2E3, Length 814 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-211ENST00000602837 LIMK2P53671 638 aa6.94□□□□□ -1.3
UBE2E3-211ENST00000602837 MAPK10P53779 464 aa6.94□□□□□ -1.3
UBE2E3-211ENST00000602837 PMS2P54278 862 aa6.94□□□□□ -1.3
UBE2E3-211ENST00000602837 SLC12A2P55011 1212 aa6.94□□□□□ -1.3
UBE2E3-211ENST00000602837 TAS2R39P59534 338 aa6.94□□□□□ -1.3
UBE2E3-211ENST00000602837 SRSF2Q01130 221 aaKnown RBP6.94□□□□□ -1.3
UBE2E3-211ENST00000602837 ROM1Q03395 351 aa6.94□□□□□ -1.3
UBE2E3-211ENST00000602837 ZFP36L1Q07352 338 aaKnown RBP6.94□□□□□ -1.3
UBE2E3-211ENST00000602837 PRKAA1Q13131 559 aa6.94□□□□□ -1.3
UBE2E3-211ENST00000602837 TSTA3Q13630 321 aaPredicted RBP6.94□□□□□ -1.3
UBE2E3-211ENST00000602837 GBX1Q14549 363 aa6.94□□□□□ -1.3
UBE2E3-211ENST00000602837 USP10Q14694 798 aaKnown RBP6.94□□□□□ -1.3
UBE2E3-211ENST00000602837 SLMAPQ14BN4 828 aa6.94□□□□□ -1.3
UBE2E3-211ENST00000602837 C16orf72Q14CZ0 275 aa6.94□□□□□ -1.3
UBE2E3-211ENST00000602837 CCSMST1Q4G0I0 132 aa6.94□□□□□ -1.3
UBE2E3-211ENST00000602837 GRTP1Q5TC63 336 aa6.94□□□□□ -1.3
UBE2E3-211ENST00000602837 CACHD1Q5VU97 1274 aa6.94□□□□□ -1.3
UBE2E3-211ENST00000602837 KLHL35Q6PF15 583 aa6.94□□□□□ -1.3
UBE2E3-211ENST00000602837 FBXO38Q6PIJ6 1188 aa6.94□□□□□ -1.3
UBE2E3-211ENST00000602837 WDR74Q6RFH5 385 aaPredicted RBP6.94□□□□□ -1.3
UBE2E3-211ENST00000602837 UNC5DQ6UXZ4 953 aa6.94□□□□□ -1.3
UBE2E3-211ENST00000602837 CYHR1Q6ZMK1 362 aa6.94□□□□□ -1.3
UBE2E3-211ENST00000602837 CYS1Q717R9 158 aa6.94□□□□□ -1.3
UBE2E3-211ENST00000602837 RAB11FIP2Q7L804 512 aa6.94□□□□□ -1.3
UBE2E3-211ENST00000602837 PIWIL4Q7Z3Z4 852 aaKnown RBP6.94□□□□□ -1.3
UBE2E3-211ENST00000602837 GALNT7Q86SF2 657 aa6.94□□□□□ -1.3
UBE2E3-211ENST00000602837 TAX1BP1Q86VP1 789 aa6.94□□□□□ -1.3
UBE2E3-211ENST00000602837 AMIGO1Q86WK6 493 aa6.94□□□□□ -1.3
UBE2E3-211ENST00000602837 OOSP2Q86WS3 158 aa6.94□□□□□ -1.3
UBE2E3-211ENST00000602837 PLXDC1Q8IUK5 500 aa6.94□□□□□ -1.3
UBE2E3-211ENST00000602837 DCUN1D3Q8IWE4 304 aa6.94□□□□□ -1.3
UBE2E3-211ENST00000602837 OR5K2Q8NHB8 316 aa6.94□□□□□ -1.3
UBE2E3-211ENST00000602837 CD200R1Q8TD46 325 aa6.94□□□□□ -1.3
UBE2E3-211ENST00000602837 LINGO1Q96FE5 620 aa6.94□□□□□ -1.3
UBE2E3-211ENST00000602837 ZDHHC12Q96GR4 267 aa6.94□□□□□ -1.3
UBE2E3-211ENST00000602837 VPS39Q96JC1 886 aa6.94□□□□□ -1.3
UBE2E3-211ENST00000602837 PPM1MQ96MI6 270 aa6.94□□□□□ -1.3
UBE2E3-211ENST00000602837 DPYSL5Q9BPU6 564 aa6.94□□□□□ -1.3
UBE2E3-211ENST00000602837 RHOJQ9H4E5 214 aa6.94□□□□□ -1.3
UBE2E3-211ENST00000602837 TFB2MQ9H5Q4 396 aaKnown RBP6.94□□□□□ -1.3
UBE2E3-211ENST00000602837 ANKZF1Q9H8Y5 726 aa6.94□□□□□ -1.3
UBE2E3-211ENST00000602837 CAB39LQ9H9S4 337 aa6.94□□□□□ -1.3
UBE2E3-211ENST00000602837 DLL4Q9NR61 685 aa6.94□□□□□ -1.3
UBE2E3-211ENST00000602837 FAM53CQ9NYF3 392 aa6.94□□□□□ -1.3
UBE2E3-211ENST00000602837 AKAP7Q9P0M2 348 aaPredicted RBP6.94□□□□□ -1.3
UBE2E3-211ENST00000602837 PISDQ9UG56 409 aa6.94□□□□□ -1.3
UBE2E3-211ENST00000602837 ZFP69BQ9UJL9 534 aa6.94□□□□□ -1.3
UBE2E3-211ENST00000602837 CORO1CQ9ULV4 474 aaPredicted RBP6.94□□□□□ -1.3
UBE2E3-211ENST00000602837 SATB2Q9UPW6 733 aa6.94□□□□□ -1.3
UBE2E3-211ENST00000602837 ICKQ9UPZ9 632 aa6.94□□□□□ -1.3
UBE2E3-211ENST00000602837 LOXL2Q9Y4K0 774 aa6.94□□□□□ -1.3
UBE2E3-211ENST00000602837 KNTC1P50748 2209 aa6.93□□□□□ -1.3
UBE2E3-211ENST00000602837 A0A1W2PNU3 283 aaPredicted RBP6.93□□□□□ -1.3
UBE2E3-211ENST00000602837 ARHGEF33A8MVX0 844 aa6.93□□□□□ -1.3
UBE2E3-211ENST00000602837 ISM1B1AKI9 464 aa6.93□□□□□ -1.3
UBE2E3-211ENST00000602837 BTN3A1O00481 513 aa6.93□□□□□ -1.3
UBE2E3-211ENST00000602837 PHGDHO43175 533 aaKnown RBP6.93□□□□□ -1.3
UBE2E3-211ENST00000602837 SCGB1D2O95969 90 aa6.93□□□□□ -1.3
UBE2E3-211ENST00000602837 C1QAP02745 245 aa6.93□□□□□ -1.3
UBE2E3-211ENST00000602837 CATP04040 527 aaKnown RBP6.93□□□□□ -1.3
UBE2E3-211ENST00000602837 TPBGLP0DKB5 382 aa6.93□□□□□ -1.3
UBE2E3-211ENST00000602837 MPC1LP0DKB6 136 aa6.93□□□□□ -1.3
UBE2E3-211ENST00000602837 CBSLP0DN79 551 aa6.93□□□□□ -1.3
UBE2E3-211ENST00000602837 THRAP10827 490 aa6.93□□□□□ -1.3
UBE2E3-211ENST00000602837 CCL4P13236 92 aa6.93□□□□□ -1.3
UBE2E3-211ENST00000602837 ENO3P13929 434 aaPredicted RBP6.93□□□□□ -1.3
UBE2E3-211ENST00000602837 ITIH1P19827 911 aa6.93□□□□□ -1.3
UBE2E3-211ENST00000602837 CDH3P22223 829 aa6.93□□□□□ -1.3
UBE2E3-211ENST00000602837 CCND1P24385 295 aa6.93□□□□□ -1.3
UBE2E3-211ENST00000602837 RBMS1P29558 406 aaKnown RBP6.93□□□□□ -1.3
UBE2E3-211ENST00000602837 ATP5DP30049 168 aa6.93□□□□□ -1.3
UBE2E3-211ENST00000602837 CCKBRP32239 447 aa6.93□□□□□ -1.3
UBE2E3-211ENST00000602837 CSTF2P33240 577 aaKnown RBP eCLIP6.93□□□□□ -1.35e-7■■■■□ 20.5
UBE2E3-211ENST00000602837 SHMT2P34897 504 aa6.93□□□□□ -1.3
UBE2E3-211ENST00000602837 SPRP35270 261 aaPredicted RBP6.93□□□□□ -1.3
UBE2E3-211ENST00000602837 CBSP35520 551 aa6.93□□□□□ -1.3
UBE2E3-211ENST00000602837 SKIV2L2P42285 1042 aaKnown RBP6.93□□□□□ -1.3
UBE2E3-211ENST00000602837 CAPZBP47756 277 aa6.93□□□□□ -1.3
UBE2E3-211ENST00000602837 KPNA2P52292 529 aaKnown RBP6.93□□□□□ -1.3
UBE2E3-211ENST00000602837 IL13RA1P78552 427 aa6.93□□□□□ -1.3
UBE2E3-211ENST00000602837 SHC2P98077 582 aa6.93□□□□□ -1.3
UBE2E3-211ENST00000602837 PIN1Q13526 163 aaPredicted RBP6.93□□□□□ -1.3
UBE2E3-211ENST00000602837 TRA2AQ13595 282 aaKnown RBP eCLIP6.93□□□□□ -1.3
UBE2E3-211ENST00000602837 BMPR2Q13873 1038 aa6.93□□□□□ -1.3
UBE2E3-211ENST00000602837 CLPPQ16740 277 aaPredicted RBP6.93□□□□□ -1.3
UBE2E3-211ENST00000602837 KIF26BQ2KJY2 2108 aa6.93□□□□□ -1.3
UBE2E3-211ENST00000602837 TOR2AQ5JU69 321 aa6.93□□□□□ -1.3
UBE2E3-211ENST00000602837 NEK10Q6ZWH5 1172 aa6.93□□□□□ -1.3
UBE2E3-211ENST00000602837 TRIM73Q86UV7 250 aa6.93□□□□□ -1.3
UBE2E3-211ENST00000602837 FAM129CQ86XR2 697 aa6.93□□□□□ -1.3
UBE2E3-211ENST00000602837 CEP97Q8IW35 865 aa6.93□□□□□ -1.3
UBE2E3-211ENST00000602837 ADGRF3Q8IZF5 1079 aa6.93□□□□□ -1.3
UBE2E3-211ENST00000602837 MYO1HQ8N1T3 1032 aa6.93□□□□□ -1.3
UBE2E3-211ENST00000602837 STPG3Q8N7X2 389 aa6.93□□□□□ -1.3
UBE2E3-211ENST00000602837 OR9A1PQ8NGU1 263 aa6.93□□□□□ -1.3
UBE2E3-211ENST00000602837 WDR36Q8NI36 951 aaKnown RBP6.93□□□□□ -1.3
UBE2E3-211ENST00000602837 MDM1Q8TC05 714 aa6.93□□□□□ -1.3
UBE2E3-211ENST00000602837 MAGEC3Q8TD91 643 aa6.93□□□□□ -1.3
UBE2E3-211ENST00000602837 RAD51AP1Q96B01 352 aa6.93□□□□□ -1.3
UBE2E3-211ENST00000602837 RNF31Q96EP0 1072 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms