RNA–Protein interactions for RNA: ENST00000600804.1

CHMP2A-207, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-207ENST00000600804 AGAP11Q8TF27 550 aa11.15□□□□□ -0.62
CHMP2A-207ENST00000600804 ZNF75CPQ92670 426 aaPredicted RBP11.15□□□□□ -0.62
CHMP2A-207ENST00000600804 LIN37Q96GY3 246 aaPredicted RBP11.15□□□□□ -0.62
CHMP2A-207ENST00000600804 PPM1MQ96MI6 270 aa11.15□□□□□ -0.62
CHMP2A-207ENST00000600804 ZNF285Q96NJ3 590 aa11.15□□□□□ -0.62
CHMP2A-207ENST00000600804 PAIP2Q9BPZ3 127 aaKnown RBP11.15□□□□□ -0.62
CHMP2A-207ENST00000600804 SLC29A3Q9BZD2 475 aa11.15□□□□□ -0.62
CHMP2A-207ENST00000600804 RHBGQ9H310 441 aa11.15□□□□□ -0.62
CHMP2A-207ENST00000600804 CLMPQ9H6B4 373 aa11.15□□□□□ -0.62
CHMP2A-207ENST00000600804 PDE7BQ9NP56 450 aa11.15□□□□□ -0.62
CHMP2A-207ENST00000600804 SEMA4BQ9NPR2 832 aaPredicted RBP11.15□□□□□ -0.62
CHMP2A-207ENST00000600804 THSD1Q9NS62 852 aa11.15□□□□□ -0.62
CHMP2A-207ENST00000600804 GEMIN8Q9NWZ8 242 aaKnown RBP11.15□□□□□ -0.62
CHMP2A-207ENST00000600804 PSD3Q9NYI0 1048 aa11.15□□□□□ -0.62
CHMP2A-207ENST00000600804 TMEM9Q9P0T7 183 aa11.15□□□□□ -0.62
CHMP2A-207ENST00000600804 ADGRE2Q9UHX3 823 aa11.15□□□□□ -0.62
CHMP2A-207ENST00000600804 WDR91A4D1P6 747 aa11.14□□□□□ -0.63
CHMP2A-207ENST00000600804 SLC9B1P1A6NJY1 282 aa11.14□□□□□ -0.63
CHMP2A-207ENST00000600804 H7BY64 318 aa11.14□□□□□ -0.63
CHMP2A-207ENST00000600804 PPP6CO00743 305 aa11.14□□□□□ -0.63
CHMP2A-207ENST00000600804 UBFD1O14562 309 aaKnown RBP11.14□□□□□ -0.63
CHMP2A-207ENST00000600804 SLC28A2O43868 658 aa11.14□□□□□ -0.63
CHMP2A-207ENST00000600804 KIF1CO43896 1103 aaKnown RBP11.14□□□□□ -0.63
CHMP2A-207ENST00000600804 SRPX2O60687 465 aaPredicted RBP11.14□□□□□ -0.63
CHMP2A-207ENST00000600804 RASSF9O75901 435 aa11.14□□□□□ -0.63
CHMP2A-207ENST00000600804 WISP1O95388 367 aa11.14□□□□□ -0.63
CHMP2A-207ENST00000600804 CD22P20273 847 aa11.14□□□□□ -0.63
CHMP2A-207ENST00000600804 ARRB2P32121 409 aa11.14□□□□□ -0.63
CHMP2A-207ENST00000600804 SCTRP47872 440 aa11.14□□□□□ -0.63
CHMP2A-207ENST00000600804 GABRA4P48169 554 aa11.14□□□□□ -0.63
CHMP2A-207ENST00000600804 SH3BP2P78314 561 aa11.14□□□□□ -0.63
CHMP2A-207ENST00000600804 OCRLQ01968 901 aa11.14□□□□□ -0.63
CHMP2A-207ENST00000600804 BST1Q10588 318 aa11.14□□□□□ -0.63
CHMP2A-207ENST00000600804 EIF3IQ13347 325 aaKnown RBP11.14□□□□□ -0.63
CHMP2A-207ENST00000600804 ZIC1Q15915 447 aa11.14□□□□□ -0.63
CHMP2A-207ENST00000600804 HIST2H2ACQ16777 129 aaPredicted RBP11.14□□□□□ -0.63
CHMP2A-207ENST00000600804 LINC00303Q3SY05 128 aa11.14□□□□□ -0.63
CHMP2A-207ENST00000600804 XKR6Q5GH73 641 aa11.14□□□□□ -0.63
CHMP2A-207ENST00000600804 ARL13AQ5H913 290 aaPredicted RBP11.14□□□□□ -0.63
CHMP2A-207ENST00000600804 ZC3H12BQ5HYM0 836 aaKnown RBP11.14□□□□□ -0.63
CHMP2A-207ENST00000600804 MANEAQ5SRI9 462 aa11.14□□□□□ -0.63
CHMP2A-207ENST00000600804 CES4AQ5XG92 561 aa11.14□□□□□ -0.63
CHMP2A-207ENST00000600804 HIST2H2AA3Q6FI13 130 aa11.14□□□□□ -0.63
CHMP2A-207ENST00000600804 LETMD1Q6P1Q0 360 aa11.14□□□□□ -0.63
CHMP2A-207ENST00000600804 FBXO42Q6P3S6 717 aa11.14□□□□□ -0.63
CHMP2A-207ENST00000600804 CYB5D1Q6P9G0 228 aa11.14□□□□□ -0.63
CHMP2A-207ENST00000600804 ZCCHC23Q6ZST2 131 aa11.14□□□□□ -0.63
CHMP2A-207ENST00000600804 BPHLQ86WA6 291 aaPredicted RBP11.14□□□□□ -0.63
CHMP2A-207ENST00000600804 DNAJC22Q8N4W6 341 aa11.14□□□□□ -0.63
CHMP2A-207ENST00000600804 OR4F6Q8NGB9 312 aa11.14□□□□□ -0.63
CHMP2A-207ENST00000600804 OR8K5Q8NH50 307 aa11.14□□□□□ -0.63
CHMP2A-207ENST00000600804 LRRC8CQ8TDW0 803 aa11.14□□□□□ -0.63
CHMP2A-207ENST00000600804 DYDC1Q8WWB3 177 aa11.14□□□□□ -0.63
CHMP2A-207ENST00000600804 ATP6V1E2Q96A05 226 aa11.14□□□□□ -0.63
CHMP2A-207ENST00000600804 REPS1Q96D71 796 aa11.14□□□□□ -0.63
CHMP2A-207ENST00000600804 CCDC74BQ96LY2 380 aa11.14□□□□□ -0.63
CHMP2A-207ENST00000600804 PRAP1Q96NZ9 151 aa11.14□□□□□ -0.63
CHMP2A-207ENST00000600804 OR2A5Q96R48 311 aa11.14□□□□□ -0.63
CHMP2A-207ENST00000600804 ZFYVE21Q9BQ24 234 aa11.14□□□□□ -0.63
CHMP2A-207ENST00000600804 ACTR8Q9H981 624 aa11.14□□□□□ -0.63
CHMP2A-207ENST00000600804 PCDHGA8Q9Y5G5 932 aa11.14□□□□□ -0.63
CHMP2A-207ENST00000600804 PCDHGA11Q9Y5H2 935 aa11.14□□□□□ -0.63
CHMP2A-207ENST00000600804 USP9XQ93008 2570 aaPredicted RBP11.14□□□□□ -0.63
CHMP2A-207ENST00000600804 USP9YO00507 2555 aaPredicted RBP11.13□□□□□ -0.63
CHMP2A-207ENST00000600804 A0A1B0GTL3 188 aa11.13□□□□□ -0.63
CHMP2A-207ENST00000600804 SERTM1A2A2V5 107 aa11.13□□□□□ -0.63
CHMP2A-207ENST00000600804 B4E171 279 aa11.13□□□□□ -0.63
CHMP2A-207ENST00000600804 CTSVO60911 334 aa11.13□□□□□ -0.63
CHMP2A-207ENST00000600804 NEFHP12036 1026 aa11.13□□□□□ -0.63
CHMP2A-207ENST00000600804 PVRP15151 417 aa11.13□□□□□ -0.63
CHMP2A-207ENST00000600804 MDH1P40925 334 aaKnown RBP11.13□□□□□ -0.63
CHMP2A-207ENST00000600804 TSPAN7P41732 249 aa11.13□□□□□ -0.63
CHMP2A-207ENST00000600804 PIK3CBP42338 1070 aa11.13□□□□□ -0.63
CHMP2A-207ENST00000600804 SLC1A6P48664 564 aa11.13□□□□□ -0.63
CHMP2A-207ENST00000600804 PPM1FP49593 454 aaPredicted RBP11.13□□□□□ -0.63
CHMP2A-207ENST00000600804 ATP1A2P50993 1020 aa11.13□□□□□ -0.63
CHMP2A-207ENST00000600804 HK2P52789 917 aa11.13□□□□□ -0.63
CHMP2A-207ENST00000600804 EMP3P54852 163 aa11.13□□□□□ -0.63
CHMP2A-207ENST00000600804 ACY1Q03154 408 aa11.13□□□□□ -0.63
CHMP2A-207ENST00000600804 SLBPQ14493 270 aaKnown RBP eCLIP11.13□□□□□ -0.63
CHMP2A-207ENST00000600804 RBBP7Q16576 425 aa11.13□□□□□ -0.63
CHMP2A-207ENST00000600804 TUBB8Q3ZCM7 444 aa11.13□□□□□ -0.63
CHMP2A-207ENST00000600804 TMTC4Q5T4D3 741 aa11.13□□□□□ -0.63
CHMP2A-207ENST00000600804 MED27Q6P2C8 311 aa11.13□□□□□ -0.63
CHMP2A-207ENST00000600804 TMIGD1Q6UXZ0 262 aa11.13□□□□□ -0.63
CHMP2A-207ENST00000600804 RPS27LQ71UM5 84 aaKnown RBP11.13□□□□□ -0.63
CHMP2A-207ENST00000600804 B3GNT8Q7Z7M8 397 aa11.13□□□□□ -0.63
CHMP2A-207ENST00000600804 SYVN1Q86TM6 617 aa11.13□□□□□ -0.63
CHMP2A-207ENST00000600804 CUZD1Q86UP6 607 aa11.13□□□□□ -0.63
CHMP2A-207ENST00000600804 FAM20CQ8IXL6 584 aa11.13□□□□□ -0.63
CHMP2A-207ENST00000600804 MFSD9Q8NBP5 474 aa11.13□□□□□ -0.63
CHMP2A-207ENST00000600804 AGBL5Q8NDL9 886 aa11.13□□□□□ -0.63
CHMP2A-207ENST00000600804 MOCOSQ96EN8 888 aa11.13□□□□□ -0.63
CHMP2A-207ENST00000600804 C7orf26Q96N11 449 aa11.13□□□□□ -0.63
CHMP2A-207ENST00000600804 SORT1Q99523 831 aa11.13□□□□□ -0.63
CHMP2A-207ENST00000600804 TRIM4Q9C037 500 aa11.13□□□□□ -0.63
CHMP2A-207ENST00000600804 B3GNT4Q9C0J1 378 aa11.13□□□□□ -0.63
CHMP2A-207ENST00000600804 STRADBQ9C0K7 418 aa11.13□□□□□ -0.63
CHMP2A-207ENST00000600804 ZMYND15Q9H091 742 aa11.13□□□□□ -0.63
CHMP2A-207ENST00000600804 ILKAPQ9H0C8 392 aaPredicted RBP11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms