RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 GNSP15586 552 aa16.91■□□□□ 0.3
SHKBP1-224ENST00000600718 AHRP35869 848 aa16.91■□□□□ 0.3
SHKBP1-224ENST00000600718 DPP6P42658 865 aa16.91■□□□□ 0.3
SHKBP1-224ENST00000600718 DHPSP49366 369 aaPredicted RBP16.91■□□□□ 0.3
SHKBP1-224ENST00000600718 DGKQP52824 942 aa16.91■□□□□ 0.3
SHKBP1-224ENST00000600718 NFYCQ13952 458 aa16.91■□□□□ 0.3
SHKBP1-224ENST00000600718 FAM174BQ3ZCQ3 159 aa16.91■□□□□ 0.3
SHKBP1-224ENST00000600718 PAGE3Q5JUK9 113 aa16.91■□□□□ 0.3
SHKBP1-224ENST00000600718 KHDRBS2Q5VWX1 349 aaKnown RBP16.91■□□□□ 0.3
SHKBP1-224ENST00000600718 COMMD6Q7Z4G1 85 aa16.91■□□□□ 0.3
SHKBP1-224ENST00000600718 ZNF548Q8NEK5 533 aaPredicted RBP16.91■□□□□ 0.3
SHKBP1-224ENST00000600718 STARD8Q92502 1023 aa16.91■□□□□ 0.3
SHKBP1-224ENST00000600718 LRRC58Q96CX6 371 aa16.91■□□□□ 0.3
SHKBP1-224ENST00000600718 GPATCH1Q9BRR8 931 aaKnown RBP16.91■□□□□ 0.3
SHKBP1-224ENST00000600718 CEP192Q8TEP8 1941 aa16.91■□□□□ 0.3
SHKBP1-224ENST00000600718 TNFSF14O43557 240 aa16.9■□□□□ 0.3
SHKBP1-224ENST00000600718 PCDH7O60245 1069 aa16.9■□□□□ 0.3
SHKBP1-224ENST00000600718 ANP32DO95626 131 aa16.9■□□□□ 0.3
SHKBP1-224ENST00000600718 PGRP06401 933 aa16.9■□□□□ 0.3
SHKBP1-224ENST00000600718 ANXA6P08133 673 aa16.9■□□□□ 0.3
SHKBP1-224ENST00000600718 UGT2B7P16662 529 aa16.9■□□□□ 0.3
SHKBP1-224ENST00000600718 PAX7P23759 505 aa16.9■□□□□ 0.3
SHKBP1-224ENST00000600718 GRIA3P42263 894 aa16.9■□□□□ 0.3
SHKBP1-224ENST00000600718 CYP4F2P78329 520 aa16.9■□□□□ 0.3
SHKBP1-224ENST00000600718 TRMT5Q32P41 509 aaKnown RBP16.9■□□□□ 0.3
SHKBP1-224ENST00000600718 PIGGQ5H8A4 983 aa16.9■□□□□ 0.3
SHKBP1-224ENST00000600718 TJAP1Q5JTD0 557 aa16.9■□□□□ 0.3
SHKBP1-224ENST00000600718 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.9■□□□□ 0.3
SHKBP1-224ENST00000600718 OR10G6Q8NH81 332 aa16.9■□□□□ 0.3
SHKBP1-224ENST00000600718 EGLN2Q96KS0 407 aa16.9■□□□□ 0.3
SHKBP1-224ENST00000600718 CENPKQ9BS16 269 aa16.9■□□□□ 0.3
SHKBP1-224ENST00000600718 UCK1Q9HA47 277 aa16.9■□□□□ 0.3
SHKBP1-224ENST00000600718 SPAG4Q9NPE6 437 aa16.9■□□□□ 0.3
SHKBP1-224ENST00000600718 ANKMY1Q9P2S6 941 aa16.9■□□□□ 0.3
SHKBP1-224ENST00000600718 AP1M2Q9Y6Q5 423 aa16.9■□□□□ 0.3
SHKBP1-224ENST00000600718 A0A1B0GVT2 93 aa16.89■□□□□ 0.3
SHKBP1-224ENST00000600718 GSAPA4D1B5 854 aa16.89■□□□□ 0.3
SHKBP1-224ENST00000600718 SAP18O00422 153 aaKnown RBP16.89■□□□□ 0.3
SHKBP1-224ENST00000600718 HAT1O14929 419 aa16.89■□□□□ 0.3
SHKBP1-224ENST00000600718 PIAS2O75928 621 aa16.89■□□□□ 0.3
SHKBP1-224ENST00000600718 PDE5AO76074 875 aa16.89■□□□□ 0.3
SHKBP1-224ENST00000600718 TBX6O95947 436 aaPredicted RBP16.89■□□□□ 0.3
SHKBP1-224ENST00000600718 S100A3P33764 101 aa16.89■□□□□ 0.3
SHKBP1-224ENST00000600718 BCL6P41182 706 aa16.89■□□□□ 0.3
SHKBP1-224ENST00000600718 FASLGP48023 281 aa16.89■□□□□ 0.3
SHKBP1-224ENST00000600718 SLC5A12Q1EHB4 618 aa16.89■□□□□ 0.3
SHKBP1-224ENST00000600718 DPY19L1Q2PZI1 675 aa16.89■□□□□ 0.3
SHKBP1-224ENST00000600718 SPANXN4Q5MJ08 99 aa16.89■□□□□ 0.3
SHKBP1-224ENST00000600718 OGFOD3Q6PK18 319 aa16.89■□□□□ 0.3
SHKBP1-224ENST00000600718 PRR23BQ6ZRT6 265 aa16.89■□□□□ 0.3
SHKBP1-224ENST00000600718 PAQR7Q86WK9 346 aa16.89■□□□□ 0.3
SHKBP1-224ENST00000600718 HPS6Q86YV9 775 aa16.89■□□□□ 0.3
SHKBP1-224ENST00000600718 PLD3Q8IV08 490 aa16.89■□□□□ 0.3
SHKBP1-224ENST00000600718 ARL14Q8N4G2 192 aa16.89■□□□□ 0.3
SHKBP1-224ENST00000600718 TRPV3Q8NET8 790 aa16.89■□□□□ 0.3
SHKBP1-224ENST00000600718 CREB3L4Q8TEY5 395 aa16.89■□□□□ 0.3
SHKBP1-224ENST00000600718 NUDT8Q8WV74 236 aa16.89■□□□□ 0.3
SHKBP1-224ENST00000600718 SLC13A3Q8WWT9 602 aa16.89■□□□□ 0.3
SHKBP1-224ENST00000600718 IL1RL2Q9HB29 575 aa16.89■□□□□ 0.3
SHKBP1-224ENST00000600718 HRASLS2Q9NWW9 162 aa16.89■□□□□ 0.3
SHKBP1-224ENST00000600718 ADA2Q9NZK5 511 aa16.89■□□□□ 0.3
SHKBP1-224ENST00000600718 TMEM181Q9P2C4 612 aa16.89■□□□□ 0.3
SHKBP1-224ENST00000600718 GNG14A0A1W2PPG7 69 aa16.89■□□□□ 0.29
SHKBP1-224ENST00000600718 ZW10O43264 779 aa16.89■□□□□ 0.29
SHKBP1-224ENST00000600718 SRSF11Q05519 484 aaKnown RBP16.89■□□□□ 0.29
SHKBP1-224ENST00000600718 SRSF5Q13243 272 aaKnown RBP16.89■□□□□ 0.29
SHKBP1-224ENST00000600718 KPNB1Q14974 876 aaKnown RBP16.89■□□□□ 0.29
SHKBP1-224ENST00000600718 ZIC1Q15915 447 aa16.89■□□□□ 0.29
SHKBP1-224ENST00000600718 MAPKAPK3Q16644 382 aa16.89■□□□□ 0.29
SHKBP1-224ENST00000600718 SLC2A7Q6PXP3 512 aa16.89■□□□□ 0.29
SHKBP1-224ENST00000600718 OOSP2Q86WS3 158 aa16.89■□□□□ 0.29
SHKBP1-224ENST00000600718 C17orf82Q86X59 251 aaPredicted RBP16.89■□□□□ 0.29
SHKBP1-224ENST00000600718 EFCAB3Q8N7B9 438 aa16.89■□□□□ 0.29
SHKBP1-224ENST00000600718 MFSD9Q8NBP5 474 aa16.89■□□□□ 0.29
SHKBP1-224ENST00000600718 WDR48Q8TAF3 677 aa16.89■□□□□ 0.29
SHKBP1-224ENST00000600718 WDR60Q8WVS4 1066 aa16.89■□□□□ 0.29
SHKBP1-224ENST00000600718 OR52E6Q96RD3 313 aa16.89■□□□□ 0.29
SHKBP1-224ENST00000600718 F2RL3Q96RI0 385 aa16.89■□□□□ 0.29
SHKBP1-224ENST00000600718 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.89■□□□□ 0.29
SHKBP1-224ENST00000600718 SUSD2Q9UGT4 822 aa16.89■□□□□ 0.29
SHKBP1-224ENST00000600718 FBXO4Q9UKT5 387 aa16.89■□□□□ 0.29
SHKBP1-224ENST00000600718 KLK4Q9Y5K2 254 aa16.89■□□□□ 0.29
SHKBP1-224ENST00000600718 CSNK1G3Q9Y6M4 447 aa16.89■□□□□ 0.29
SHKBP1-224ENST00000600718 FXYD1O00168 92 aa16.88■□□□□ 0.29
SHKBP1-224ENST00000600718 NOBOXO60393 691 aa16.88■□□□□ 0.29
SHKBP1-224ENST00000600718 LRATO95237 230 aa16.88■□□□□ 0.29
SHKBP1-224ENST00000600718 ME2P23368 584 aa16.88■□□□□ 0.29
SHKBP1-224ENST00000600718 CALRP27797 417 aaKnown RBP16.88■□□□□ 0.29
SHKBP1-224ENST00000600718 CTSKP43235 329 aa16.88■□□□□ 0.29
SHKBP1-224ENST00000600718 MAZP56270 477 aaKnown RBP16.88■□□□□ 0.29
SHKBP1-224ENST00000600718 ZNF763Q0D2J5 394 aa16.88■□□□□ 0.29
SHKBP1-224ENST00000600718 PWP1Q13610 501 aa16.88■□□□□ 0.29
SHKBP1-224ENST00000600718 SIM2Q14190 667 aaPredicted RBP16.88■□□□□ 0.29
SHKBP1-224ENST00000600718 TMEM35AQ53FP2 167 aa16.88■□□□□ 0.29
SHKBP1-224ENST00000600718 C1orf146Q5VVC0 180 aa16.88■□□□□ 0.29
SHKBP1-224ENST00000600718 MSANTD1Q6ZTZ1 278 aa16.88■□□□□ 0.29
SHKBP1-224ENST00000600718 PAGE2Q7Z2X7 111 aa16.88■□□□□ 0.29
SHKBP1-224ENST00000600718 TMEM105Q8N8V8 129 aa16.88■□□□□ 0.29
SHKBP1-224ENST00000600718 DTWD2Q8NBA8 298 aa16.88■□□□□ 0.29
SHKBP1-224ENST00000600718 DNAJB8Q8NHS0 232 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms