RNA–Protein interactions for RNA: ENST00000600022.5

IRF3-225, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-225ENST00000600022 SPSB2Q99619 263 aa13.09□□□□□ -0.31
IRF3-225ENST00000600022 NDC1Q9BTX1 674 aa13.09□□□□□ -0.31
IRF3-225ENST00000600022 CHRNA10Q9GZZ6 450 aa13.09□□□□□ -0.31
IRF3-225ENST00000600022 P2RY12Q9H244 342 aa13.09□□□□□ -0.31
IRF3-225ENST00000600022 SOX17Q9H6I2 414 aaPredicted RBP13.09□□□□□ -0.31
IRF3-225ENST00000600022 TXLNGQ9NUQ3 528 aa13.09□□□□□ -0.31
IRF3-225ENST00000600022 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.09□□□□□ -0.31
IRF3-225ENST00000600022 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.09□□□□□ -0.31
IRF3-225ENST00000600022 PLCL2Q9UPR0 1127 aa13.09□□□□□ -0.31
IRF3-225ENST00000600022 HS3ST3B1Q9Y662 390 aa13.09□□□□□ -0.31
IRF3-225ENST00000600022 ENO4A6NNW6 628 aa13.08□□□□□ -0.32
IRF3-225ENST00000600022 PRMT5O14744 637 aaPredicted RBP13.08□□□□□ -0.32
IRF3-225ENST00000600022 LIN7AO14910 233 aaPredicted RBP13.08□□□□□ -0.32
IRF3-225ENST00000600022 BIRC5O15392 142 aa13.08□□□□□ -0.32
IRF3-225ENST00000600022 KLHL18O94889 574 aa13.08□□□□□ -0.32
IRF3-225ENST00000600022 AP2A2O94973 939 aa13.08□□□□□ -0.32
IRF3-225ENST00000600022 ESR1P03372 595 aa13.08□□□□□ -0.32
IRF3-225ENST00000600022 C2P06681 752 aa13.08□□□□□ -0.32
IRF3-225ENST00000600022 CD9P21926 228 aa13.08□□□□□ -0.32
IRF3-225ENST00000600022 FDXRP22570 491 aa13.08□□□□□ -0.32
IRF3-225ENST00000600022 NSG1P42857 185 aa13.08□□□□□ -0.32
IRF3-225ENST00000600022 YBX1P67809 324 aaKnown RBP13.08□□□□□ -0.32
IRF3-225ENST00000600022 NKG7Q16617 165 aa13.08□□□□□ -0.32
IRF3-225ENST00000600022 PDK4Q16654 411 aa13.08□□□□□ -0.32
IRF3-225ENST00000600022 SLC5A12Q1EHB4 618 aa13.08□□□□□ -0.32
IRF3-225ENST00000600022 ATG16L1Q676U5 607 aa13.08□□□□□ -0.32
IRF3-225ENST00000600022 ZNF549Q6P9A3 640 aa13.08□□□□□ -0.32
IRF3-225ENST00000600022 TLDC1Q6P9B6 456 aa13.08□□□□□ -0.32
IRF3-225ENST00000600022 CMC1Q7Z7K0 106 aa13.08□□□□□ -0.32
IRF3-225ENST00000600022 TICAM1Q8IUC6 712 aa13.08□□□□□ -0.32
IRF3-225ENST00000600022 CFAP61Q8NHU2 1237 aa13.08□□□□□ -0.32
IRF3-225ENST00000600022 DNAJB14Q8TBM8 379 aa13.08□□□□□ -0.32
IRF3-225ENST00000600022 BIRC8Q96P09 236 aa13.08□□□□□ -0.32
IRF3-225ENST00000600022 NDNQ99608 321 aa13.08□□□□□ -0.32
IRF3-225ENST00000600022 C17orf62Q9BQA9 187 aa13.08□□□□□ -0.32
IRF3-225ENST00000600022 AARSD1Q9BTE6 412 aaKnown RBP13.08□□□□□ -0.32
IRF3-225ENST00000600022 FAM107BQ9H098 131 aa13.08□□□□□ -0.32
IRF3-225ENST00000600022 OR6C2Q9NZP2 312 aa13.08□□□□□ -0.32
IRF3-225ENST00000600022 CTSFQ9UBX1 484 aa13.08□□□□□ -0.32
IRF3-225ENST00000600022 VWA7Q9Y334 891 aa13.08□□□□□ -0.32
IRF3-225ENST00000600022 SVILO95425 2214 aa13.07□□□□□ -0.32
IRF3-225ENST00000600022 F8W8V4 182 aa13.07□□□□□ -0.32
IRF3-225ENST00000600022 ZG16O60844 167 aa13.07□□□□□ -0.32
IRF3-225ENST00000600022 WISP3O95389 354 aaPredicted RBP13.07□□□□□ -0.32
IRF3-225ENST00000600022 FAM107AO95990 144 aa13.07□□□□□ -0.32
IRF3-225ENST00000600022 POU3F2P20265 443 aaPredicted RBP13.07□□□□□ -0.32
IRF3-225ENST00000600022 MMP11P24347 488 aa13.07□□□□□ -0.32
IRF3-225ENST00000600022 PKLRP30613 574 aa13.07□□□□□ -0.32
IRF3-225ENST00000600022 SERPINB4P48594 390 aa13.07□□□□□ -0.32
IRF3-225ENST00000600022 WDR4P57081 412 aaKnown RBP13.07□□□□□ -0.32
IRF3-225ENST00000600022 TAS2R39P59534 338 aa13.07□□□□□ -0.32
IRF3-225ENST00000600022 ASPHQ12797 758 aa13.07□□□□□ -0.32
IRF3-225ENST00000600022 AIMP2Q13155 320 aaKnown RBP13.07□□□□□ -0.32
IRF3-225ENST00000600022 ELOAQ14241 798 aaKnown RBP13.07□□□□□ -0.32
IRF3-225ENST00000600022 FAM83EQ2M2I3 478 aa13.07□□□□□ -0.32
IRF3-225ENST00000600022 CCSMST1Q4G0I0 132 aa13.07□□□□□ -0.32
IRF3-225ENST00000600022 CTSL3PQ5NE16 218 aa13.07□□□□□ -0.32
IRF3-225ENST00000600022 HECTD2Q5U5R9 776 aa13.07□□□□□ -0.32
IRF3-225ENST00000600022 PRAMEF13Q5VWM6 474 aa13.07□□□□□ -0.32
IRF3-225ENST00000600022 UGT3A1Q6NUS8 523 aa13.07□□□□□ -0.32
IRF3-225ENST00000600022 IGFL2Q6UWQ7 119 aa13.07□□□□□ -0.32
IRF3-225ENST00000600022 LINC00696Q6ZRV3 163 aa13.07□□□□□ -0.32
IRF3-225ENST00000600022 ZNF771Q7L3S4 317 aaPredicted RBP13.07□□□□□ -0.32
IRF3-225ENST00000600022 NUDCD3Q8IVD9 361 aa13.07□□□□□ -0.32
IRF3-225ENST00000600022 ST6GALNAC3Q8NDV1 305 aa13.07□□□□□ -0.32
IRF3-225ENST00000600022 ARMC2Q8NEN0 867 aa13.07□□□□□ -0.32
IRF3-225ENST00000600022 RAB3IL1Q8TBN0 382 aa13.07□□□□□ -0.32
IRF3-225ENST00000600022 KCNJ9Q92806 393 aa13.07□□□□□ -0.32
IRF3-225ENST00000600022 SCYL1Q96KG9 808 aa13.07□□□□□ -0.32
IRF3-225ENST00000600022 CNDP1Q96KN2 507 aa13.07□□□□□ -0.32
IRF3-225ENST00000600022 CCT8L2Q96SF2 557 aa13.07□□□□□ -0.32
IRF3-225ENST00000600022 OLFM1Q99784 485 aa13.07□□□□□ -0.32
IRF3-225ENST00000600022 WDR77Q9BQA1 342 aaPredicted RBP13.07□□□□□ -0.32
IRF3-225ENST00000600022 CAB39LQ9H9S4 337 aa13.07□□□□□ -0.32
IRF3-225ENST00000600022 POPDC3Q9HBV1 291 aa13.07□□□□□ -0.32
IRF3-225ENST00000600022 SLC17A7Q9P2U7 560 aa13.07□□□□□ -0.32
IRF3-225ENST00000600022 POLG2Q9UHN1 485 aa13.07□□□□□ -0.32
IRF3-225ENST00000600022 CRYL1Q9Y2S2 319 aa13.07□□□□□ -0.32
IRF3-225ENST00000600022 MED16Q9Y2X0 877 aa13.07□□□□□ -0.32
IRF3-225ENST00000600022 MAU2Q9Y6X3 613 aa13.07□□□□□ -0.32
IRF3-225ENST00000600022 ARHGAP10A1A4S6 786 aa13.06□□□□□ -0.32
IRF3-225ENST00000600022 E5RI56 91 aa13.06□□□□□ -0.32
IRF3-225ENST00000600022 H3BMM5 538 aa13.06□□□□□ -0.32
IRF3-225ENST00000600022 CTSVO60911 334 aa13.06□□□□□ -0.32
IRF3-225ENST00000600022 VPS26AO75436 327 aa13.06□□□□□ -0.32
IRF3-225ENST00000600022 ONECUT2O95948 504 aa13.06□□□□□ -0.32
IRF3-225ENST00000600022 SLC35E2BP0CK96 405 aa13.06□□□□□ -0.32
IRF3-225ENST00000600022 PKMP14618 531 aaKnown RBP13.06□□□□□ -0.32
IRF3-225ENST00000600022 SLC26A3P40879 764 aa13.06□□□□□ -0.32
IRF3-225ENST00000600022 SEC24CP53992 1094 aa13.06□□□□□ -0.32
IRF3-225ENST00000600022 CDKN2DP55273 166 aa13.06□□□□□ -0.32
IRF3-225ENST00000600022 HSPA14Q0VDF9 509 aa13.06□□□□□ -0.32
IRF3-225ENST00000600022 PDAP1Q13442 181 aaKnown RBP13.06□□□□□ -0.32
IRF3-225ENST00000600022 KIR2DS3Q14952 304 aa13.06□□□□□ -0.32
IRF3-225ENST00000600022 GKAP1Q5VSY0 366 aaPredicted RBP13.06□□□□□ -0.32
IRF3-225ENST00000600022 FRMPD2BQ6IN97 320 aa13.06□□□□□ -0.32
IRF3-225ENST00000600022 FIGLAQ6QHK4 219 aa13.06□□□□□ -0.32
IRF3-225ENST00000600022 RGS9BPQ6ZS82 235 aa13.06□□□□□ -0.32
IRF3-225ENST00000600022 LAPTM4BQ86VI4 370 aa13.06□□□□□ -0.32
IRF3-225ENST00000600022 SPNS2Q8IVW8 549 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms