RNA–Protein interactions for RNA: ENST00000599342.5

VRK3-216, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 795 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-216ENST00000599342 NR4A3Q92570 626 aa9.26□□□□□ -0.93
VRK3-216ENST00000599342 SLCO2A1Q92959 643 aa9.26□□□□□ -0.93
VRK3-216ENST00000599342 SNF8Q96H20 258 aa9.26□□□□□ -0.93
VRK3-216ENST00000599342 RUNDC3BQ96NL0 473 aa9.26□□□□□ -0.93
VRK3-216ENST00000599342 CYTH2Q99418 400 aa9.26□□□□□ -0.93
VRK3-216ENST00000599342 SGPP1Q9BX95 441 aa9.26□□□□□ -0.93
VRK3-216ENST00000599342 RNF32Q9H0A6 362 aa9.26□□□□□ -0.93
VRK3-216ENST00000599342 TRMT1Q9NXH9 659 aaKnown RBP9.26□□□□□ -0.93
VRK3-216ENST00000599342 STMN3Q9NZ72 180 aa9.26□□□□□ -0.93
VRK3-216ENST00000599342 ABI3Q9P2A4 366 aa9.26□□□□□ -0.93
VRK3-216ENST00000599342 CHMP2BQ9UQN3 213 aa9.26□□□□□ -0.93
VRK3-216ENST00000599342 NAALAD2Q9Y3Q0 740 aa9.26□□□□□ -0.93
VRK3-216ENST00000599342 DOCK10Q96BY6 2186 aa9.25□□□□□ -0.93
VRK3-216ENST00000599342 ZNF860A6NHJ4 632 aa9.25□□□□□ -0.93
VRK3-216ENST00000599342 A8MUI8 341 aa9.25□□□□□ -0.93
VRK3-216ENST00000599342 OR1F1O43749 312 aa9.25□□□□□ -0.93
VRK3-216ENST00000599342 LCMT2O60294 686 aaKnown RBP9.25□□□□□ -0.93
VRK3-216ENST00000599342 CDC123O75794 336 aaPredicted RBP9.25□□□□□ -0.93
VRK3-216ENST00000599342 GUCA1CO95843 209 aa9.25□□□□□ -0.93
VRK3-216ENST00000599342 CRYABP02511 175 aaKnown RBP9.25□□□□□ -0.93
VRK3-216ENST00000599342 SERPIND1P05546 499 aa9.25□□□□□ -0.93
VRK3-216ENST00000599342 NPPBP16860 134 aa9.25□□□□□ -0.93
VRK3-216ENST00000599342 IL10P22301 178 aa9.25□□□□□ -0.93
VRK3-216ENST00000599342 DCTP40126 519 aa9.25□□□□□ -0.93
VRK3-216ENST00000599342 ELK3P41970 407 aa9.25□□□□□ -0.93
VRK3-216ENST00000599342 EFNA3P52797 238 aa9.25□□□□□ -0.93
VRK3-216ENST00000599342 SNRPNP63162 240 aaKnown RBP9.25□□□□□ -0.93
VRK3-216ENST00000599342 MEF2AQ02078 507 aaPredicted RBP9.25□□□□□ -0.93
VRK3-216ENST00000599342 ACTN3Q08043 901 aaPredicted RBP9.25□□□□□ -0.93
VRK3-216ENST00000599342 RGS1Q08116 209 aa9.25□□□□□ -0.93
VRK3-216ENST00000599342 ABRAXAS2Q15018 415 aa9.25□□□□□ -0.93
VRK3-216ENST00000599342 EXT1Q16394 746 aa9.25□□□□□ -0.93
VRK3-216ENST00000599342 HP1BP3Q5SSJ5 553 aaPredicted RBP9.25□□□□□ -0.93
VRK3-216ENST00000599342 TEDDM1Q5T9Z0 273 aa9.25□□□□□ -0.93
VRK3-216ENST00000599342 ZNF787Q6DD87 383 aa9.25□□□□□ -0.93
VRK3-216ENST00000599342 NIPAL1Q6NVV3 410 aa9.25□□□□□ -0.93
VRK3-216ENST00000599342 GFRALQ6UXV0 394 aa9.25□□□□□ -0.93
VRK3-216ENST00000599342 ANKRD37Q7Z713 158 aa9.25□□□□□ -0.93
VRK3-216ENST00000599342 FJX1Q86VR8 437 aa9.25□□□□□ -0.93
VRK3-216ENST00000599342 KLHL7Q8IXQ5 586 aa9.25□□□□□ -0.93
VRK3-216ENST00000599342 ABHD11Q8NFV4 315 aa9.25□□□□□ -0.93
VRK3-216ENST00000599342 PYCR2Q96C36 320 aa9.25□□□□□ -0.93
VRK3-216ENST00000599342 LRRC39Q96DD0 335 aa9.25□□□□□ -0.93
VRK3-216ENST00000599342 TM4SF19Q96DZ7 209 aa9.25□□□□□ -0.93
VRK3-216ENST00000599342 PEX11GQ96HA9 241 aa9.25□□□□□ -0.93
VRK3-216ENST00000599342 CAPZA3Q96KX2 299 aa9.25□□□□□ -0.93
VRK3-216ENST00000599342 IMMP1LQ96LU5 166 aa9.25□□□□□ -0.93
VRK3-216ENST00000599342 ZNF354BQ96LW1 612 aa9.25□□□□□ -0.93
VRK3-216ENST00000599342 OR1F2PQ96R84 312 aa9.25□□□□□ -0.93
VRK3-216ENST00000599342 RBCK1Q9BYM8 510 aa9.25□□□□□ -0.93
VRK3-216ENST00000599342 KCNK13Q9HB14 408 aa9.25□□□□□ -0.93
VRK3-216ENST00000599342 ZFATQ9P243 1243 aa9.25□□□□□ -0.93
VRK3-216ENST00000599342 SLC17A6Q9P2U8 582 aa9.25□□□□□ -0.93
VRK3-216ENST00000599342 VWA7Q9Y334 891 aa9.25□□□□□ -0.93
VRK3-216ENST00000599342 SLC22A7Q9Y694 548 aa9.25□□□□□ -0.93
VRK3-216ENST00000599342 MDC1Q14676 2089 aaKnown RBP9.25□□□□□ -0.93
VRK3-216ENST00000599342 HEATR5BQ9P2D3 2071 aa9.25□□□□□ -0.93
VRK3-216ENST00000599342 ICE1Q9Y2F5 2266 aa9.24□□□□□ -0.93
VRK3-216ENST00000599342 FLNCQ14315 2725 aa9.24□□□□□ -0.93
VRK3-216ENST00000599342 LRRK2Q5S007 2527 aa9.24□□□□□ -0.93
VRK3-216ENST00000599342 TRBC2A0A5B9 178 aa9.24□□□□□ -0.93
VRK3-216ENST00000599342 URADA6NGE7 173 aa9.24□□□□□ -0.93
VRK3-216ENST00000599342 PRAMEF2O60811 474 aa9.24□□□□□ -0.93
VRK3-216ENST00000599342 TSPAN12O95859 305 aa9.24□□□□□ -0.93
VRK3-216ENST00000599342 STSP08842 583 aa9.24□□□□□ -0.93
VRK3-216ENST00000599342 JAK1P23458 1154 aa9.24□□□□□ -0.93
VRK3-216ENST00000599342 TDGF1P3P51864 188 aa9.24□□□□□ -0.93
VRK3-216ENST00000599342 ARL4CP56559 192 aa9.24□□□□□ -0.93
VRK3-216ENST00000599342 KCNK10P57789 538 aa9.24□□□□□ -0.93
VRK3-216ENST00000599342 TAS2R50P59544 299 aa9.24□□□□□ -0.93
VRK3-216ENST00000599342 DR1Q01658 176 aa9.24□□□□□ -0.93
VRK3-216ENST00000599342 PWP1Q13610 501 aa9.24□□□□□ -0.93
VRK3-216ENST00000599342 CSHL1Q14406 222 aa9.24□□□□□ -0.93
VRK3-216ENST00000599342 ZRSR2Q15696 482 aaKnown RBP9.24□□□□□ -0.93
VRK3-216ENST00000599342 NSDHLQ15738 373 aa9.24□□□□□ -0.93
VRK3-216ENST00000599342 MEP1AQ16819 746 aa9.24□□□□□ -0.93
VRK3-216ENST00000599342 C1QL3Q5VWW1 255 aa9.24□□□□□ -0.93
VRK3-216ENST00000599342 ZNF324BQ6AW86 544 aaPredicted RBP9.24□□□□□ -0.93
VRK3-216ENST00000599342 PAPD4Q6PIY7 484 aaKnown RBP9.24□□□□□ -0.93
VRK3-216ENST00000599342 ABHD13Q7L211 337 aa9.24□□□□□ -0.93
VRK3-216ENST00000599342 PDSS2Q86YH6 399 aa9.24□□□□□ -0.93
VRK3-216ENST00000599342 IGDCC3Q8IVU1 814 aa9.24□□□□□ -0.93
VRK3-216ENST00000599342 SLC5A8Q8N695 610 aa9.24□□□□□ -0.93
VRK3-216ENST00000599342 ZNF740Q8NDX6 193 aa9.24□□□□□ -0.93
VRK3-216ENST00000599342 OR56A3Q8NH54 315 aa9.24□□□□□ -0.93
VRK3-216ENST00000599342 DNAJB8Q8NHS0 232 aa9.24□□□□□ -0.93
VRK3-216ENST00000599342 SLC5A11Q8WWX8 675 aa9.24□□□□□ -0.93
VRK3-216ENST00000599342 FBXL8Q96CD0 374 aa9.24□□□□□ -0.93
VRK3-216ENST00000599342 TSNARE1Q96NA8 513 aa9.24□□□□□ -0.93
VRK3-216ENST00000599342 TAAR6Q96RI8 345 aa9.24□□□□□ -0.93
VRK3-216ENST00000599342 LPAR4Q99677 370 aa9.24□□□□□ -0.93
VRK3-216ENST00000599342 OLFM1Q99784 485 aa9.24□□□□□ -0.93
VRK3-216ENST00000599342 GRPEL1Q9HAV7 217 aa9.24□□□□□ -0.93
VRK3-216ENST00000599342 DYRK1BQ9Y463 629 aa9.24□□□□□ -0.93
VRK3-216ENST00000599342 TRGV8A0A0C4DH27 118 aa9.23□□□□□ -0.93
VRK3-216ENST00000599342 OR2W5A6NFC9 320 aa9.23□□□□□ -0.93
VRK3-216ENST00000599342 MAGEB17A8MXT2 336 aa9.23□□□□□ -0.93
VRK3-216ENST00000599342 GALR3O60755 368 aaPredicted RBP9.23□□□□□ -0.93
VRK3-216ENST00000599342 ZG16O60844 167 aa9.23□□□□□ -0.93
VRK3-216ENST00000599342 UNC5CO95185 931 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms