RNA–Protein interactions for RNA: ENST00000597209.1

CHMP2A-203, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-203ENST00000597209 IL1RNP18510 177 aa16.96■□□□□ 0.31
CHMP2A-203ENST00000597209 IL10P22301 178 aa16.96■□□□□ 0.31
CHMP2A-203ENST00000597209 GLRBP48167 497 aa16.96■□□□□ 0.31
CHMP2A-203ENST00000597209 EFNA3P52797 238 aa16.96■□□□□ 0.31
CHMP2A-203ENST00000597209 TAS2R39P59534 338 aa16.96■□□□□ 0.31
CHMP2A-203ENST00000597209 EEF1A2Q05639 463 aaKnown RBP16.96■□□□□ 0.31
CHMP2A-203ENST00000597209 PWP1Q13610 501 aa16.96■□□□□ 0.31
CHMP2A-203ENST00000597209 ZNF169Q14929 603 aaPredicted RBP16.96■□□□□ 0.31
CHMP2A-203ENST00000597209 PCOLCEQ15113 449 aa16.96■□□□□ 0.31
CHMP2A-203ENST00000597209 TLR1Q15399 786 aa16.96■□□□□ 0.31
CHMP2A-203ENST00000597209 PRSS41Q7RTY9 318 aa16.96■□□□□ 0.31
CHMP2A-203ENST00000597209 AFAP1L2Q8N4X5 818 aa16.96■□□□□ 0.31
CHMP2A-203ENST00000597209 KCT2Q8NC54 265 aa16.96■□□□□ 0.31
CHMP2A-203ENST00000597209 PYROXD1Q8WU10 500 aa16.96■□□□□ 0.31
CHMP2A-203ENST00000597209 SLC5A11Q8WWX8 675 aa16.96■□□□□ 0.31
CHMP2A-203ENST00000597209 METTL21AQ8WXB1 218 aa16.96■□□□□ 0.31
CHMP2A-203ENST00000597209 IMMP1LQ96LU5 166 aa16.96■□□□□ 0.31
CHMP2A-203ENST00000597209 MACROD1Q9BQ69 325 aa16.96■□□□□ 0.31
CHMP2A-203ENST00000597209 TUBB6Q9BUF5 446 aa16.96■□□□□ 0.31
CHMP2A-203ENST00000597209 CSAG2Q9Y5P2 127 aa16.96■□□□□ 0.31
CHMP2A-203ENST00000597209 LRRK2Q5S007 2527 aa16.96■□□□□ 0.3
CHMP2A-203ENST00000597209 DOPEY2Q9Y3R5 2298 aa16.95■□□□□ 0.3
CHMP2A-203ENST00000597209 C8orf89P0DMQ9 161 aa16.95■□□□□ 0.3
CHMP2A-203ENST00000597209 GP1BBP13224 206 aa16.95■□□□□ 0.3
CHMP2A-203ENST00000597209 SAT1P21673 171 aa16.95■□□□□ 0.3
CHMP2A-203ENST00000597209 CSHL1Q14406 222 aa16.95■□□□□ 0.3
CHMP2A-203ENST00000597209 HERC3Q15034 1050 aa16.95■□□□□ 0.3
CHMP2A-203ENST00000597209 FAAH2Q6GMR7 532 aa16.95■□□□□ 0.3
CHMP2A-203ENST00000597209 NIPAL1Q6NVV3 410 aa16.95■□□□□ 0.3
CHMP2A-203ENST00000597209 RPUSD3Q6P087 351 aaKnown RBP16.95■□□□□ 0.3
CHMP2A-203ENST00000597209 NT5CQ8TCD5 201 aa16.95■□□□□ 0.3
CHMP2A-203ENST00000597209 NEIL2Q969S2 332 aa16.95■□□□□ 0.3
CHMP2A-203ENST00000597209 CYTH2Q99418 400 aa16.95■□□□□ 0.3
CHMP2A-203ENST00000597209 PHACTR1Q9C0D0 580 aa16.95■□□□□ 0.3
CHMP2A-203ENST00000597209 VN1R1Q9GZP7 353 aa16.95■□□□□ 0.3
CHMP2A-203ENST00000597209 PELI2Q9HAT8 420 aa16.95■□□□□ 0.3
CHMP2A-203ENST00000597209 SMYD2Q9NRG4 433 aa16.95■□□□□ 0.3
CHMP2A-203ENST00000597209 AGPAT4Q9NRZ5 378 aa16.95■□□□□ 0.3
CHMP2A-203ENST00000597209 C19orf25Q9UFG5 118 aaPredicted RBP16.95■□□□□ 0.3
CHMP2A-203ENST00000597209 OARD1Q9Y530 152 aa16.95■□□□□ 0.3
CHMP2A-203ENST00000597209 SGK494L7N484 410 aa16.94■□□□□ 0.3
CHMP2A-203ENST00000597209 CDC7O00311 574 aa16.94■□□□□ 0.3
CHMP2A-203ENST00000597209 RAD51CO43502 376 aa16.94■□□□□ 0.3
CHMP2A-203ENST00000597209 OR1F1O43749 312 aa16.94■□□□□ 0.3
CHMP2A-203ENST00000597209 JRKO75564 520 aa16.94■□□□□ 0.3
CHMP2A-203ENST00000597209 WFS1O76024 890 aa16.94■□□□□ 0.3
CHMP2A-203ENST00000597209 AGFG2O95081 481 aa16.94■□□□□ 0.3
CHMP2A-203ENST00000597209 GSTA2P09210 222 aa16.94■□□□□ 0.3
CHMP2A-203ENST00000597209 CASQ1P31415 396 aa16.94■□□□□ 0.3
CHMP2A-203ENST00000597209 AHRP35869 848 aa16.94■□□□□ 0.3
CHMP2A-203ENST00000597209 XCR1P46094 333 aa16.94■□□□□ 0.3
CHMP2A-203ENST00000597209 SCTRP47872 440 aa16.94■□□□□ 0.3
CHMP2A-203ENST00000597209 HNMTP50135 292 aa16.94■□□□□ 0.3
CHMP2A-203ENST00000597209 ETF1P62495 437 aaKnown RBP16.94■□□□□ 0.3
CHMP2A-203ENST00000597209 POU4F1Q01851 419 aa16.94■□□□□ 0.3
CHMP2A-203ENST00000597209 MRPL49Q13405 166 aaKnown RBP16.94■□□□□ 0.3
CHMP2A-203ENST00000597209 CATSPEREQ5SY80 951 aa16.94■□□□□ 0.3
CHMP2A-203ENST00000597209 LINC00696Q6ZRV3 163 aa16.94■□□□□ 0.3
CHMP2A-203ENST00000597209 ADAMTSL2Q86TH1 951 aa16.94■□□□□ 0.3
CHMP2A-203ENST00000597209 THOC6Q86W42 341 aaKnown RBP16.94■□□□□ 0.3
CHMP2A-203ENST00000597209 PDSS2Q86YH6 399 aa16.94■□□□□ 0.3
CHMP2A-203ENST00000597209 KLHDC8AQ8IYD2 350 aa16.94■□□□□ 0.3
CHMP2A-203ENST00000597209 ZCCHC10Q8TBK6 192 aa16.94■□□□□ 0.3
CHMP2A-203ENST00000597209 BRIX1Q8TDN6 353 aaKnown RBP16.94■□□□□ 0.3
CHMP2A-203ENST00000597209 CDKL2Q92772 493 aa16.94■□□□□ 0.3
CHMP2A-203ENST00000597209 HAS2Q92819 552 aa16.94■□□□□ 0.3
CHMP2A-203ENST00000597209 OR1F2PQ96R84 312 aa16.94■□□□□ 0.3
CHMP2A-203ENST00000597209 DPH5Q9H2P9 285 aa16.94■□□□□ 0.3
CHMP2A-203ENST00000597209 CLK4Q9HAZ1 481 aaKnown RBP16.94■□□□□ 0.3
CHMP2A-203ENST00000597209 GRHL1Q9NZI5 618 aa16.94■□□□□ 0.3
CHMP2A-203ENST00000597209 HCN3Q9P1Z3 774 aa16.94■□□□□ 0.3
CHMP2A-203ENST00000597209 CTNNAL1Q9UBT7 734 aa16.94■□□□□ 0.3
CHMP2A-203ENST00000597209 ZFP69BQ9UJL9 534 aa16.94■□□□□ 0.3
CHMP2A-203ENST00000597209 NTNG1Q9Y2I2 539 aa16.94■□□□□ 0.3
CHMP2A-203ENST00000597209 NAALAD2Q9Y3Q0 740 aa16.94■□□□□ 0.3
CHMP2A-203ENST00000597209 DYRK1BQ9Y463 629 aa16.94■□□□□ 0.3
CHMP2A-203ENST00000597209 BLACEA4D250 179 aa16.93■□□□□ 0.3
CHMP2A-203ENST00000597209 NPEPPSL1A6NEC2 478 aa16.93■□□□□ 0.3
CHMP2A-203ENST00000597209 WISP3O95389 354 aaPredicted RBP16.93■□□□□ 0.3
CHMP2A-203ENST00000597209 SSTR1P30872 391 aa16.93■□□□□ 0.3
CHMP2A-203ENST00000597209 AGTR2P50052 363 aa16.93■□□□□ 0.3
CHMP2A-203ENST00000597209 SKP1P63208 163 aa16.93■□□□□ 0.3
CHMP2A-203ENST00000597209 MRPS25P82663 173 aaKnown RBP16.93■□□□□ 0.3
CHMP2A-203ENST00000597209 REEP5Q00765 189 aa16.93■□□□□ 0.3
CHMP2A-203ENST00000597209 MEF2AQ02078 507 aaPredicted RBP16.93■□□□□ 0.3
CHMP2A-203ENST00000597209 ZNF460Q14592 562 aa16.93■□□□□ 0.3
CHMP2A-203ENST00000597209 NR6A1Q15406 480 aa16.93■□□□□ 0.3
CHMP2A-203ENST00000597209 EIF2S3LQ2VIR3 472 aaKnown RBP16.93■□□□□ 0.3
CHMP2A-203ENST00000597209 NXPE4Q6UWF7 544 aa16.93■□□□□ 0.3
CHMP2A-203ENST00000597209 CPEB2Q7Z5Q1 589 aaKnown RBP16.93■□□□□ 0.3
CHMP2A-203ENST00000597209 CEP97Q8IW35 865 aa16.93■□□□□ 0.3
CHMP2A-203ENST00000597209 PLPP5Q8NEB5 264 aa16.93■□□□□ 0.3
CHMP2A-203ENST00000597209 SSC4DQ8WTU2 575 aa16.93■□□□□ 0.3
CHMP2A-203ENST00000597209 ANKRD49Q8WVL7 239 aa16.93■□□□□ 0.3
CHMP2A-203ENST00000597209 CNDP1Q96KN2 507 aa16.93■□□□□ 0.3
CHMP2A-203ENST00000597209 DERL2Q9GZP9 239 aa16.93■□□□□ 0.3
CHMP2A-203ENST00000597209 RNF32Q9H0A6 362 aa16.93■□□□□ 0.3
CHMP2A-203ENST00000597209 GPAMQ9HCL2 828 aa16.93■□□□□ 0.3
CHMP2A-203ENST00000597209 SAYSD1Q9NPB0 183 aa16.93■□□□□ 0.3
CHMP2A-203ENST00000597209 PTGFRNQ9P2B2 879 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms