RNA–Protein interactions for RNA: ENST00000596708.1

CHMP2A-202, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-202ENST00000596708 SPINK14Q6IE38 97 aa9.96□□□□□ -0.82
CHMP2A-202ENST00000596708 H3F3CQ6NXT2 135 aa9.96□□□□□ -0.82
CHMP2A-202ENST00000596708 TUBA3EQ6PEY2 450 aa9.96□□□□□ -0.82
CHMP2A-202ENST00000596708 PAPD4Q6PIY7 484 aaKnown RBP9.96□□□□□ -0.82
CHMP2A-202ENST00000596708 PIWIL4Q7Z3Z4 852 aaKnown RBP9.96□□□□□ -0.82
CHMP2A-202ENST00000596708 ASPGQ86U10 573 aa9.96□□□□□ -0.82
CHMP2A-202ENST00000596708 CRLF3Q8IUI8 442 aa9.96□□□□□ -0.82
CHMP2A-202ENST00000596708 CPNE9Q8IYJ1 553 aa9.96□□□□□ -0.82
CHMP2A-202ENST00000596708 TMEM178AQ8NBL3 297 aa9.96□□□□□ -0.82
CHMP2A-202ENST00000596708 FAM98AQ8NCA5 519 aaKnown RBP9.96□□□□□ -0.82
CHMP2A-202ENST00000596708 M1APQ8TC57 530 aa9.96□□□□□ -0.82
CHMP2A-202ENST00000596708 SLC13A3Q8WWT9 602 aa9.96□□□□□ -0.82
CHMP2A-202ENST00000596708 KCNJ9Q92806 393 aa9.96□□□□□ -0.82
CHMP2A-202ENST00000596708 THAP11Q96EK4 314 aa9.96□□□□□ -0.82
CHMP2A-202ENST00000596708 PEX11GQ96HA9 241 aa9.96□□□□□ -0.82
CHMP2A-202ENST00000596708 LURAP1Q96LR2 239 aa9.96□□□□□ -0.82
CHMP2A-202ENST00000596708 GPR137Q96N19 417 aa9.96□□□□□ -0.82
CHMP2A-202ENST00000596708 SIGLEC12Q96PQ1 595 aa9.96□□□□□ -0.82
CHMP2A-202ENST00000596708 LPAR4Q99677 370 aa9.96□□□□□ -0.82
CHMP2A-202ENST00000596708 HES7Q9BYE0 225 aa9.96□□□□□ -0.82
CHMP2A-202ENST00000596708 TSPAN10Q9H1Z9 355 aaPredicted RBP9.96□□□□□ -0.82
CHMP2A-202ENST00000596708 HOMER3Q9NSC5 361 aa9.96□□□□□ -0.82
CHMP2A-202ENST00000596708 KLHL42Q9P2K6 505 aa9.96□□□□□ -0.82
CHMP2A-202ENST00000596708 NPIPA1Q9UND3 350 aa9.96□□□□□ -0.82
CHMP2A-202ENST00000596708 PCDHGB6Q9Y5F9 930 aa9.96□□□□□ -0.82
CHMP2A-202ENST00000596708 F8P00451 2351 aa9.96□□□□□ -0.82
CHMP2A-202ENST00000596708 SDR42E2A6NKP2 422 aa9.95□□□□□ -0.82
CHMP2A-202ENST00000596708 GABRR3A8MPY1 467 aa9.95□□□□□ -0.82
CHMP2A-202ENST00000596708 GOLGA8MH3BSY2 632 aa9.95□□□□□ -0.82
CHMP2A-202ENST00000596708 LCMT2O60294 686 aaKnown RBP9.95□□□□□ -0.82
CHMP2A-202ENST00000596708 RDH16O75452 317 aa9.95□□□□□ -0.82
CHMP2A-202ENST00000596708 CDC123O75794 336 aaPredicted RBP9.95□□□□□ -0.82
CHMP2A-202ENST00000596708 CLDN14O95500 239 aa9.95□□□□□ -0.82
CHMP2A-202ENST00000596708 SLC1A2P43004 574 aa9.95□□□□□ -0.82
CHMP2A-202ENST00000596708 TAS2R50P59544 299 aa9.95□□□□□ -0.82
CHMP2A-202ENST00000596708 TBPL1P62380 186 aa9.95□□□□□ -0.82
CHMP2A-202ENST00000596708 CSNK1G2P78368 415 aa9.95□□□□□ -0.82
CHMP2A-202ENST00000596708 NSDHLQ15738 373 aa9.95□□□□□ -0.82
CHMP2A-202ENST00000596708 MAPKAPK3Q16644 382 aa9.95□□□□□ -0.82
CHMP2A-202ENST00000596708 ANKRD22Q5VYY1 191 aa9.95□□□□□ -0.82
CHMP2A-202ENST00000596708 ARMC3Q5W041 872 aa9.95□□□□□ -0.82
CHMP2A-202ENST00000596708 CAPN13Q6MZZ7 669 aaPredicted RBP9.95□□□□□ -0.82
CHMP2A-202ENST00000596708 TMEM214Q6NUQ4 689 aaKnown RBP9.95□□□□□ -0.82
CHMP2A-202ENST00000596708 UGT3A1Q6NUS8 523 aa9.95□□□□□ -0.82
CHMP2A-202ENST00000596708 ZNF549Q6P9A3 640 aa9.95□□□□□ -0.82
CHMP2A-202ENST00000596708 GALNTL5Q7Z4T8 443 aa9.95□□□□□ -0.82
CHMP2A-202ENST00000596708 CAND1Q86VP6 1230 aaKnown RBP9.95□□□□□ -0.82
CHMP2A-202ENST00000596708 SLC26A11Q86WA9 606 aa9.95□□□□□ -0.82
CHMP2A-202ENST00000596708 C17orf64Q86WR6 236 aa9.95□□□□□ -0.82
CHMP2A-202ENST00000596708 SPPL2CQ8IUH8 684 aa9.95□□□□□ -0.82
CHMP2A-202ENST00000596708 PALM2Q8IXS6 379 aa9.95□□□□□ -0.82
CHMP2A-202ENST00000596708 SLC5A8Q8N695 610 aa9.95□□□□□ -0.82
CHMP2A-202ENST00000596708 HORMAD2Q8N7B1 307 aa9.95□□□□□ -0.82
CHMP2A-202ENST00000596708 KCT2Q8NC54 265 aa9.95□□□□□ -0.82
CHMP2A-202ENST00000596708 MDS2Q8NDY4 140 aa9.95□□□□□ -0.82
CHMP2A-202ENST00000596708 PLPP5Q8NEB5 264 aa9.95□□□□□ -0.82
CHMP2A-202ENST00000596708 CD200R1Q8TD46 325 aa9.95□□□□□ -0.82
CHMP2A-202ENST00000596708 CALML6Q8TD86 181 aa9.95□□□□□ -0.82
CHMP2A-202ENST00000596708 THAP3Q8WTV1 239 aaPredicted RBP9.95□□□□□ -0.82
CHMP2A-202ENST00000596708 MTFMTQ96DP5 389 aaKnown RBP9.95□□□□□ -0.82
CHMP2A-202ENST00000596708 CCDC138Q96M89 665 aa9.95□□□□□ -0.82
CHMP2A-202ENST00000596708 RBCK1Q9BYM8 510 aa9.95□□□□□ -0.82
CHMP2A-202ENST00000596708 PCBD2Q9H0N5 130 aa9.95□□□□□ -0.82
CHMP2A-202ENST00000596708 ATG10Q9H0Y0 220 aa9.95□□□□□ -0.82
CHMP2A-202ENST00000596708 CDCP1Q9H5V8 836 aa9.95□□□□□ -0.82
CHMP2A-202ENST00000596708 GPAMQ9HCL2 828 aa9.95□□□□□ -0.82
CHMP2A-202ENST00000596708 MMP25Q9NPA2 562 aa9.95□□□□□ -0.82
CHMP2A-202ENST00000596708 LZTFL1Q9NQ48 299 aa9.95□□□□□ -0.82
CHMP2A-202ENST00000596708 C20orf96Q9NUD7 363 aaPredicted RBP9.95□□□□□ -0.82
CHMP2A-202ENST00000596708 MED16Q9Y2X0 877 aa9.95□□□□□ -0.82
CHMP2A-202ENST00000596708 NAALAD2Q9Y3Q0 740 aa9.95□□□□□ -0.82
CHMP2A-202ENST00000596708 MAD1L1Q9Y6D9 718 aa9.95□□□□□ -0.82
CHMP2A-202ENST00000596708 COMMD10Q9Y6G5 202 aa9.95□□□□□ -0.82
CHMP2A-202ENST00000596708 FREM3P0C091 2139 aa9.94□□□□□ -0.82
CHMP2A-202ENST00000596708 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.94□□□□□ -0.82
CHMP2A-202ENST00000596708 ZNF860A6NHJ4 632 aa9.94□□□□□ -0.82
CHMP2A-202ENST00000596708 MAN1A2O60476 641 aa9.94□□□□□ -0.82
CHMP2A-202ENST00000596708 HAUS5O94927 633 aa9.94□□□□□ -0.82
CHMP2A-202ENST00000596708 SERPIND1P05546 499 aa9.94□□□□□ -0.82
CHMP2A-202ENST00000596708 HIST1H2AGP0C0S8 130 aaPredicted RBP9.94□□□□□ -0.82
CHMP2A-202ENST00000596708 SLC35G6P0C7Q6 338 aa9.94□□□□□ -0.82
CHMP2A-202ENST00000596708 MLNP12872 115 aa9.94□□□□□ -0.82
CHMP2A-202ENST00000596708 ABOP16442 354 aa9.94□□□□□ -0.82
CHMP2A-202ENST00000596708 HIST1H2ADP20671 130 aa9.94□□□□□ -0.82
CHMP2A-202ENST00000596708 AGAP20933 346 aa9.94□□□□□ -0.82
CHMP2A-202ENST00000596708 CDC25BP30305 580 aa9.94□□□□□ -0.82
CHMP2A-202ENST00000596708 CXCR5P32302 372 aa9.94□□□□□ -0.82
CHMP2A-202ENST00000596708 COILP38432 576 aaPredicted RBP9.94□□□□□ -0.82
CHMP2A-202ENST00000596708 RGS4P49798 205 aa9.94□□□□□ -0.82
CHMP2A-202ENST00000596708 OR4D2P58180 307 aa9.94□□□□□ -0.82
CHMP2A-202ENST00000596708 MPP1Q00013 466 aa9.94□□□□□ -0.82
CHMP2A-202ENST00000596708 NAE1Q13564 534 aa9.94□□□□□ -0.82
CHMP2A-202ENST00000596708 ABRAXAS2Q15018 415 aa9.94□□□□□ -0.82
CHMP2A-202ENST00000596708 SLC25A25Q6KCM7 469 aa9.94□□□□□ -0.82
CHMP2A-202ENST00000596708 AGTRAPQ6RW13 159 aa9.94□□□□□ -0.82
CHMP2A-202ENST00000596708 LCTLQ6UWM7 567 aa9.94□□□□□ -0.82
CHMP2A-202ENST00000596708 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.94□□□□□ -0.82
CHMP2A-202ENST00000596708 PCGF5Q86SE9 256 aa9.94□□□□□ -0.82
CHMP2A-202ENST00000596708 LMNTD2Q8IXW0 634 aa9.94□□□□□ -0.82
CHMP2A-202ENST00000596708 ADAMTS18Q8TE60 1221 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms