RNA–Protein interactions for RNA: ENST00000596136.5

USE1-207, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 1 (best) BASIC

Gene USE1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-207ENST00000596136 RBMXL3Q8N7X1 1067 aaKnown RBP12.37□□□□□ -0.43
USE1-207ENST00000596136 KCT2Q8NC54 265 aa12.37□□□□□ -0.43
USE1-207ENST00000596136 ZNF740Q8NDX6 193 aa12.37□□□□□ -0.43
USE1-207ENST00000596136 OR9A4Q8NGU2 314 aa12.37□□□□□ -0.43
USE1-207ENST00000596136 KIAA1191Q96A73 305 aa12.37□□□□□ -0.43
USE1-207ENST00000596136 MACROD1Q9BQ69 325 aa12.37□□□□□ -0.43
USE1-207ENST00000596136 MESP1Q9BRJ9 268 aa12.37□□□□□ -0.43
USE1-207ENST00000596136 TRIM4Q9C037 500 aa12.37□□□□□ -0.43
USE1-207ENST00000596136 TSPYL1Q9H0U9 437 aa12.37□□□□□ -0.43
USE1-207ENST00000596136 SPNS1Q9H2V7 528 aa12.37□□□□□ -0.43
USE1-207ENST00000596136 COPG2Q9UBF2 871 aa12.37□□□□□ -0.43
USE1-207ENST00000596136 ZFP69BQ9UJL9 534 aa12.37□□□□□ -0.43
USE1-207ENST00000596136 KCNE2Q9Y6J6 123 aa12.37□□□□□ -0.43
USE1-207ENST00000596136 FLNBO75369 2602 aaKnown RBP12.37□□□□□ -0.43
USE1-207ENST00000596136 LOC102723996A0A087X1L8 192 aa12.36□□□□□ -0.43
USE1-207ENST00000596136 HMX2A2RU54 273 aa12.36□□□□□ -0.43
USE1-207ENST00000596136 CTAGE15A4D2H0 777 aa12.36□□□□□ -0.43
USE1-207ENST00000596136 PYCARD-AS1I3L0S3 204 aa12.36□□□□□ -0.43
USE1-207ENST00000596136 TAPBPO15533 448 aa12.36□□□□□ -0.43
USE1-207ENST00000596136 OR1F1O43749 312 aa12.36□□□□□ -0.43
USE1-207ENST00000596136 IPO13O94829 963 aaKnown RBP12.36□□□□□ -0.43
USE1-207ENST00000596136 HPP00738 406 aa12.36□□□□□ -0.43
USE1-207ENST00000596136 STATHP02808 62 aa12.36□□□□□ -0.43
USE1-207ENST00000596136 ALPPP05187 535 aa12.36□□□□□ -0.43
USE1-207ENST00000596136 CTAGE8P0CG41 777 aa12.36□□□□□ -0.43
USE1-207ENST00000596136 SLC35E2BP0CK96 405 aa12.36□□□□□ -0.43
USE1-207ENST00000596136 GNAZP19086 355 aa12.36□□□□□ -0.43
USE1-207ENST00000596136 CRABP2P29373 138 aa12.36□□□□□ -0.43
USE1-207ENST00000596136 KCNC1P48547 511 aa12.36□□□□□ -0.43
USE1-207ENST00000596136 CD97P48960 835 aa12.36□□□□□ -0.43
USE1-207ENST00000596136 EFNA3P52797 238 aa12.36□□□□□ -0.43
USE1-207ENST00000596136 MEF2AQ02078 507 aaPredicted RBP12.36□□□□□ -0.43
USE1-207ENST00000596136 Q0VFX4 171 aa12.36□□□□□ -0.43
USE1-207ENST00000596136 OR4D1Q15615 310 aa12.36□□□□□ -0.43
USE1-207ENST00000596136 SYT16Q17RD7 645 aa12.36□□□□□ -0.43
USE1-207ENST00000596136 NADK2Q4G0N4 442 aa12.36□□□□□ -0.43
USE1-207ENST00000596136 JMJD6Q6NYC1 403 aaPredicted RBP12.36□□□□□ -0.43
USE1-207ENST00000596136 IGFL2Q6UWQ7 119 aa12.36□□□□□ -0.43
USE1-207ENST00000596136 SLCO4C1Q6ZQN7 724 aa12.36□□□□□ -0.43
USE1-207ENST00000596136 CCDC91Q7Z6B0 441 aa12.36□□□□□ -0.43
USE1-207ENST00000596136 CTAGE6Q86UF2 777 aa12.36□□□□□ -0.43
USE1-207ENST00000596136 PDSS2Q86YH6 399 aa12.36□□□□□ -0.43
USE1-207ENST00000596136 GPSM1Q86YR5 675 aa12.36□□□□□ -0.43
USE1-207ENST00000596136 CTAGE4Q8IX94 777 aa12.36□□□□□ -0.43
USE1-207ENST00000596136 SPATA6LQ8N4H0 392 aa12.36□□□□□ -0.43
USE1-207ENST00000596136 TBC1D19Q8N5T2 526 aa12.36□□□□□ -0.43
USE1-207ENST00000596136 PDPRQ8NCN5 879 aa12.36□□□□□ -0.43
USE1-207ENST00000596136 NT5CQ8TCD5 201 aa12.36□□□□□ -0.43
USE1-207ENST00000596136 ZNF592Q92610 1267 aa12.36□□□□□ -0.43
USE1-207ENST00000596136 MIB2Q96AX9 1013 aa12.36□□□□□ -0.43
USE1-207ENST00000596136 MOCOSQ96EN8 888 aa12.36□□□□□ -0.43
USE1-207ENST00000596136 EGFL8Q99944 293 aa12.36□□□□□ -0.43
USE1-207ENST00000596136 GPRC5BQ9NZH0 403 aa12.36□□□□□ -0.43
USE1-207ENST00000596136 PTBP2Q9UKA9 531 aaKnown RBP12.36□□□□□ -0.43
USE1-207ENST00000596136 DYRK1BQ9Y463 629 aa12.36□□□□□ -0.43
USE1-207ENST00000596136 ASH1LQ9NR48 2969 aaKnown RBP12.36□□□□□ -0.43
USE1-207ENST00000596136 SHANK1Q9Y566 2161 aa12.35□□□□□ -0.43
USE1-207ENST00000596136 CCDC189A1A4V9 331 aa12.35□□□□□ -0.43
USE1-207ENST00000596136 MAP2K7O14733 419 aa12.35□□□□□ -0.43
USE1-207ENST00000596136 FFAR3O14843 346 aa12.35□□□□□ -0.43
USE1-207ENST00000596136 GPR42O15529 346 aa12.35□□□□□ -0.43
USE1-207ENST00000596136 SMIM10L1P0DMW3 83 aa12.35□□□□□ -0.43
USE1-207ENST00000596136 COX6A1P12074 109 aa12.35□□□□□ -0.43
USE1-207ENST00000596136 ACPPP15309 386 aa12.35□□□□□ -0.43
USE1-207ENST00000596136 IL1RNP18510 177 aa12.35□□□□□ -0.43
USE1-207ENST00000596136 IL10P22301 178 aa12.35□□□□□ -0.43
USE1-207ENST00000596136 ECHS1P30084 290 aa12.35□□□□□ -0.43
USE1-207ENST00000596136 GDF5P43026 501 aa12.35□□□□□ -0.43
USE1-207ENST00000596136 MAT1AQ00266 395 aaKnown RBP12.35□□□□□ -0.43
USE1-207ENST00000596136 HYAL2Q12891 473 aa12.35□□□□□ -0.43
USE1-207ENST00000596136 DLG1Q12959 904 aa12.35□□□□□ -0.43
USE1-207ENST00000596136 RAPSNQ13702 412 aa12.35□□□□□ -0.43
USE1-207ENST00000596136 HERC3Q15034 1050 aa12.35□□□□□ -0.43
USE1-207ENST00000596136 C18orf21Q32NC0 220 aaPredicted RBP12.35□□□□□ -0.43
USE1-207ENST00000596136 SULT1C3Q6IMI6 304 aa12.35□□□□□ -0.43
USE1-207ENST00000596136 FRA10AC1Q70Z53 315 aa12.35□□□□□ -0.43
USE1-207ENST00000596136 NDUFAF7Q7L592 441 aa12.35□□□□□ -0.43
USE1-207ENST00000596136 ISCA2Q86U28 154 aa12.35□□□□□ -0.43
USE1-207ENST00000596136 PRSS58Q8IYP2 241 aa12.35□□□□□ -0.43
USE1-207ENST00000596136 ANKRD53Q8N9V6 530 aa12.35□□□□□ -0.43
USE1-207ENST00000596136 Q8NA96 180 aa12.35□□□□□ -0.43
USE1-207ENST00000596136 TRPV3Q8NET8 790 aa12.35□□□□□ -0.43
USE1-207ENST00000596136 OR51Q1Q8NH59 317 aa12.35□□□□□ -0.43
USE1-207ENST00000596136 KIF18AQ8NI77 898 aa12.35□□□□□ -0.43
USE1-207ENST00000596136 CREB3L4Q8TEY5 395 aa12.35□□□□□ -0.43
USE1-207ENST00000596136 PNPLA2Q96AD5 504 aa12.35□□□□□ -0.43
USE1-207ENST00000596136 SMIM10Q96HG1 83 aa12.35□□□□□ -0.43
USE1-207ENST00000596136 TSNARE1Q96NA8 513 aa12.35□□□□□ -0.43
USE1-207ENST00000596136 CYTH2Q99418 400 aa12.35□□□□□ -0.43
USE1-207ENST00000596136 AIF1LQ9BQI0 150 aa12.35□□□□□ -0.43
USE1-207ENST00000596136 TMEM79Q9BSE2 394 aa12.35□□□□□ -0.43
USE1-207ENST00000596136 YIPF2Q9BWQ6 316 aa12.35□□□□□ -0.43
USE1-207ENST00000596136 CAPS2Q9BXY5 557 aa12.35□□□□□ -0.43
USE1-207ENST00000596136 UNKQ9C0B0 810 aaKnown RBP12.35□□□□□ -0.43
USE1-207ENST00000596136 SLC6A16Q9GZN6 736 aa12.35□□□□□ -0.43
USE1-207ENST00000596136 PITHD1Q9GZP4 211 aaPredicted RBP12.35□□□□□ -0.43
USE1-207ENST00000596136 LHPPQ9H008 270 aa12.35□□□□□ -0.43
USE1-207ENST00000596136 CLMPQ9H6B4 373 aa12.35□□□□□ -0.43
USE1-207ENST00000596136 ACSS3Q9H6R3 686 aa12.35□□□□□ -0.43
USE1-207ENST00000596136 NT5DC2Q9H857 520 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 123.8 ms