RNA–Protein interactions for RNA: ENST00000593764.5

SHKBP1-202, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-202ENST00000593764 YIPF2Q9BWQ6 316 aa17.53■□□□□ 0.4
SHKBP1-202ENST00000593764 ZNF552Q9H707 407 aaPredicted RBP17.53■□□□□ 0.4
SHKBP1-202ENST00000593764 MKKSQ9NPJ1 570 aaPredicted RBP17.53■□□□□ 0.4
SHKBP1-202ENST00000593764 KCNE2Q9Y6J6 123 aa17.53■□□□□ 0.4
SHKBP1-202ENST00000593764 RELNP78509 3460 aa17.53■□□□□ 0.4
SHKBP1-202ENST00000593764 NUP210LQ5VU65 1888 aa17.52■□□□□ 0.4
SHKBP1-202ENST00000593764 NCF1BA6NI72 391 aaPredicted RBP17.52■□□□□ 0.4
SHKBP1-202ENST00000593764 NCF1CA8MVU1 366 aaPredicted RBP17.52■□□□□ 0.4
SHKBP1-202ENST00000593764 IDSB3KWA1 339 aa17.52■□□□□ 0.4
SHKBP1-202ENST00000593764 NCF1P14598 390 aaPredicted RBP17.52■□□□□ 0.4
SHKBP1-202ENST00000593764 IL1RNP18510 177 aa17.52■□□□□ 0.4
SHKBP1-202ENST00000593764 GGT5P36269 586 aa17.52■□□□□ 0.4
SHKBP1-202ENST00000593764 SCTRP47872 440 aa17.52■□□□□ 0.4
SHKBP1-202ENST00000593764 AVPR1BP47901 424 aa17.52■□□□□ 0.4
SHKBP1-202ENST00000593764 CSRP3P50461 194 aa17.52■□□□□ 0.4
SHKBP1-202ENST00000593764 EMP2P54851 167 aa17.52■□□□□ 0.4
SHKBP1-202ENST00000593764 REEP5Q00765 189 aa17.52■□□□□ 0.4
SHKBP1-202ENST00000593764 AIMP2Q13155 320 aaKnown RBP17.52■□□□□ 0.4
SHKBP1-202ENST00000593764 NADK2Q4G0N4 442 aa17.52■□□□□ 0.4
SHKBP1-202ENST00000593764 PDSS2Q86YH6 399 aa17.52■□□□□ 0.4
SHKBP1-202ENST00000593764 GPSM1Q86YR5 675 aa17.52■□□□□ 0.4
SHKBP1-202ENST00000593764 ZC3H7AQ8IWR0 971 aaKnown RBP17.52■□□□□ 0.4
SHKBP1-202ENST00000593764 ANKRD53Q8N9V6 530 aa17.52■□□□□ 0.4
SHKBP1-202ENST00000593764 IFT81Q8WYA0 676 aa17.52■□□□□ 0.4
SHKBP1-202ENST00000593764 KIAA1191Q96A73 305 aa17.52■□□□□ 0.4
SHKBP1-202ENST00000593764 TMEM79Q9BSE2 394 aa17.52■□□□□ 0.4
SHKBP1-202ENST00000593764 PELI2Q9HAT8 420 aa17.52■□□□□ 0.4
SHKBP1-202ENST00000593764 C14orf105Q9NVL8 296 aa17.52■□□□□ 0.4
SHKBP1-202ENST00000593764 MTRF1LQ9UGC7 380 aaKnown RBP17.52■□□□□ 0.4
SHKBP1-202ENST00000593764 DYRK1BQ9Y463 629 aa17.52■□□□□ 0.4
SHKBP1-202ENST00000593764 SLC22A7Q9Y694 548 aa17.52■□□□□ 0.4
SHKBP1-202ENST00000593764 PRRC2CQ9Y520 2896 aaKnown RBP17.51■□□□□ 0.39
SHKBP1-202ENST00000593764 SGK494L7N484 410 aa17.51■□□□□ 0.39
SHKBP1-202ENST00000593764 WDR47O94967 919 aa17.51■□□□□ 0.39
SHKBP1-202ENST00000593764 WISP1O95388 367 aa17.51■□□□□ 0.39
SHKBP1-202ENST00000593764 BMP10O95393 424 aa17.51■□□□□ 0.39
SHKBP1-202ENST00000593764 CRABP2P29373 138 aa17.51■□□□□ 0.39
SHKBP1-202ENST00000593764 Q0VFX4 171 aa17.51■□□□□ 0.39
SHKBP1-202ENST00000593764 PWP1Q13610 501 aa17.51■□□□□ 0.39
SHKBP1-202ENST00000593764 TUBB8Q3ZCM7 444 aa17.51■□□□□ 0.39
SHKBP1-202ENST00000593764 FBXO48Q5FWF7 155 aa17.51■□□□□ 0.39
SHKBP1-202ENST00000593764 CDKL4Q5MAI5 379 aa17.51■□□□□ 0.39
SHKBP1-202ENST00000593764 VWA5B1Q5TIE3 1220 aa17.51■□□□□ 0.39
SHKBP1-202ENST00000593764 SLCO4C1Q6ZQN7 724 aa17.51■□□□□ 0.39
SHKBP1-202ENST00000593764 CNTRLQ7Z7A1 2325 aa17.51■□□□□ 0.39
SHKBP1-202ENST00000593764 TMPRSS11BQ86T26 416 aa17.51■□□□□ 0.39
SHKBP1-202ENST00000593764 ISCA2Q86U28 154 aa17.51■□□□□ 0.39
SHKBP1-202ENST00000593764 AFAP1L2Q8N4X5 818 aa17.51■□□□□ 0.39
SHKBP1-202ENST00000593764 RBMXL3Q8N7X1 1067 aaKnown RBP17.51■□□□□ 0.39
SHKBP1-202ENST00000593764 ZCCHC10Q8TBK6 192 aa17.51■□□□□ 0.39
SHKBP1-202ENST00000593764 C8orf44Q96CB5 159 aa17.51■□□□□ 0.39
SHKBP1-202ENST00000593764 MRRFQ96E11 262 aaKnown RBP17.51■□□□□ 0.39
SHKBP1-202ENST00000593764 FUT8Q9BYC5 575 aa17.51■□□□□ 0.39
SHKBP1-202ENST00000593764 IGSF5Q9NSI5 407 aa17.51■□□□□ 0.39
SHKBP1-202ENST00000593764 C5AR2Q9P296 337 aa17.51■□□□□ 0.39
SHKBP1-202ENST00000593764 ZFP69BQ9UJL9 534 aa17.51■□□□□ 0.39
SHKBP1-202ENST00000593764 PTBP2Q9UKA9 531 aaKnown RBP17.51■□□□□ 0.39
SHKBP1-202ENST00000593764 G3BP2Q9UN86 482 aaKnown RBP17.51■□□□□ 0.39
SHKBP1-202ENST00000593764 A0A1W2PQ72 361 aa17.5■□□□□ 0.39
SHKBP1-202ENST00000593764 NDUFS4O43181 175 aa17.5■□□□□ 0.39
SHKBP1-202ENST00000593764 JRKO75564 520 aa17.5■□□□□ 0.39
SHKBP1-202ENST00000593764 SLC35G6P0C7Q6 338 aa17.5■□□□□ 0.39
SHKBP1-202ENST00000593764 VARSP26640 1264 aaKnown RBP17.5■□□□□ 0.39
SHKBP1-202ENST00000593764 AHRP35869 848 aa17.5■□□□□ 0.39
SHKBP1-202ENST00000593764 SLMAPQ14BN4 828 aa17.5■□□□□ 0.39
SHKBP1-202ENST00000593764 MROH9Q5TGP6 573 aa17.5■□□□□ 0.39
SHKBP1-202ENST00000593764 RAPH1Q70E73 1250 aa17.5■□□□□ 0.39
SHKBP1-202ENST00000593764 OR51Q1Q8NH59 317 aa17.5■□□□□ 0.39
SHKBP1-202ENST00000593764 NT5CQ8TCD5 201 aa17.5■□□□□ 0.39
SHKBP1-202ENST00000593764 ESAMQ96AP7 390 aa17.5■□□□□ 0.39
SHKBP1-202ENST00000593764 CYTH2Q99418 400 aa17.5■□□□□ 0.39
SHKBP1-202ENST00000593764 FMO2Q99518 471 aa17.5■□□□□ 0.39
SHKBP1-202ENST00000593764 AIF1LQ9BQI0 150 aa17.5■□□□□ 0.39
SHKBP1-202ENST00000593764 TSPYL1Q9H0U9 437 aa17.5■□□□□ 0.39
SHKBP1-202ENST00000593764 CDC42EP4Q9H3Q1 356 aaKnown RBP17.5■□□□□ 0.39
SHKBP1-202ENST00000593764 ACSS3Q9H6R3 686 aa17.5■□□□□ 0.39
SHKBP1-202ENST00000593764 ANKHQ9HCJ1 492 aa17.5■□□□□ 0.39
SHKBP1-202ENST00000593764 NAALAD2Q9Y3Q0 740 aa17.5■□□□□ 0.39
SHKBP1-202ENST00000593764 MYO18BQ8IUG5 2567 aa17.5■□□□□ 0.39
SHKBP1-202ENST00000593764 DPM1O60762 260 aa17.49■□□□□ 0.39
SHKBP1-202ENST00000593764 PRAMEF4O60810 478 aa17.49■□□□□ 0.39
SHKBP1-202ENST00000593764 KLHL18O94889 574 aa17.49■□□□□ 0.39
SHKBP1-202ENST00000593764 HEXBP07686 556 aa17.49■□□□□ 0.39
SHKBP1-202ENST00000593764 C1GALT1C1LP0DN25 315 aa17.49■□□□□ 0.39
SHKBP1-202ENST00000593764 ACPPP15309 386 aa17.49■□□□□ 0.39
SHKBP1-202ENST00000593764 GNAZP19086 355 aa17.49■□□□□ 0.39
SHKBP1-202ENST00000593764 ITGA3P26006 1051 aa17.49■□□□□ 0.39
SHKBP1-202ENST00000593764 PHBP35232 272 aa17.49■□□□□ 0.39
SHKBP1-202ENST00000593764 CD97P48960 835 aa17.49■□□□□ 0.39
SHKBP1-202ENST00000593764 MLLT10P55197 1068 aa17.49■□□□□ 0.39
SHKBP1-202ENST00000593764 HYAL2Q12891 473 aa17.49■□□□□ 0.39
SHKBP1-202ENST00000593764 BMPR2Q13873 1038 aa17.49■□□□□ 0.39
SHKBP1-202ENST00000593764 IGFBP7Q16270 282 aa17.49■□□□□ 0.39
SHKBP1-202ENST00000593764 PRAMEF9Q5VWM5 478 aa17.49■□□□□ 0.39
SHKBP1-202ENST00000593764 SULT1C3Q6IMI6 304 aa17.49■□□□□ 0.39
SHKBP1-202ENST00000593764 TMEM205Q6UW68 189 aa17.49■□□□□ 0.39
SHKBP1-202ENST00000593764 IGFL3Q6UXB1 125 aa17.49■□□□□ 0.39
SHKBP1-202ENST00000593764 CEP128Q6ZU80 1094 aa17.49■□□□□ 0.39
SHKBP1-202ENST00000593764 HPS6Q86YV9 775 aa17.49■□□□□ 0.39
SHKBP1-202ENST00000593764 PARP9Q8IXQ6 854 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms