RNA–Protein interactions for RNA: ENST00000593706.3

PNKP-202, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 849 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-202ENST00000593706 CTAGE9A4FU28 777 aa13.93□□□□□ -0.18
PNKP-202ENST00000593706 FAM227AF5H4B4 570 aa13.93□□□□□ -0.18
PNKP-202ENST00000593706 SLC19A2O60779 497 aa13.93□□□□□ -0.18
PNKP-202ENST00000593706 ESRRAP11474 423 aaPredicted RBP13.93□□□□□ -0.18
PNKP-202ENST00000593706 PGAM1P18669 254 aa13.93□□□□□ -0.18
PNKP-202ENST00000593706 EFNA3P52797 238 aa13.93□□□□□ -0.18
PNKP-202ENST00000593706 CUL1Q13616 776 aa13.93□□□□□ -0.18
PNKP-202ENST00000593706 LANCL3Q6ZV70 420 aa13.93□□□□□ -0.18
PNKP-202ENST00000593706 LMNTD2Q8IXW0 634 aa13.93□□□□□ -0.18
PNKP-202ENST00000593706 MCOLN3Q8TDD5 553 aa13.93□□□□□ -0.18
PNKP-202ENST00000593706 KCNJ9Q92806 393 aa13.93□□□□□ -0.18
PNKP-202ENST00000593706 IMMP1LQ96LU5 166 aa13.93□□□□□ -0.18
PNKP-202ENST00000593706 VN1R1Q9GZP7 353 aa13.93□□□□□ -0.18
PNKP-202ENST00000593706 FBXO6Q9NRD1 293 aaPredicted RBP13.93□□□□□ -0.18
PNKP-202ENST00000593706 KLHL42Q9P2K6 505 aa13.93□□□□□ -0.18
PNKP-202ENST00000593706 E7ENX8 843 aa13.92□□□□□ -0.18
PNKP-202ENST00000593706 H0YIG0 161 aa13.92□□□□□ -0.18
PNKP-202ENST00000593706 MLYCDO95822 493 aa13.92□□□□□ -0.18
PNKP-202ENST00000593706 CYC1P08574 325 aa13.92□□□□□ -0.18
PNKP-202ENST00000593706 POU3F2P20265 443 aaPredicted RBP13.92□□□□□ -0.18
PNKP-202ENST00000593706 XCR1P46094 333 aa13.92□□□□□ -0.18
PNKP-202ENST00000593706 MPP1Q00013 466 aa13.92□□□□□ -0.18
PNKP-202ENST00000593706 TIAL1Q01085 375 aaKnown RBP eCLIP13.92□□□□□ -0.18
PNKP-202ENST00000593706 DR1Q01658 176 aa13.92□□□□□ -0.18
PNKP-202ENST00000593706 TAP2Q03519 686 aa13.92□□□□□ -0.18
PNKP-202ENST00000593706 RELAQ04206 551 aa13.92□□□□□ -0.18
PNKP-202ENST00000593706 DHX9Q08211 1270 aaKnown RBP13.92□□□□□ -0.18
PNKP-202ENST00000593706 MORF4L2Q15014 288 aa13.92□□□□□ -0.18
PNKP-202ENST00000593706 ZNF630Q2M218 657 aaPredicted RBP13.92□□□□□ -0.18
PNKP-202ENST00000593706 HSP90AA5PQ58FG0 334 aa13.92□□□□□ -0.18
PNKP-202ENST00000593706 FCRLBQ6BAA4 426 aa13.92□□□□□ -0.18
PNKP-202ENST00000593706 PLAG1Q6DJT9 500 aa13.92□□□□□ -0.18
PNKP-202ENST00000593706 CPEB2Q7Z5Q1 589 aaKnown RBP13.92□□□□□ -0.18
PNKP-202ENST00000593706 CNTN4Q8IWV2 1026 aa13.92□□□□□ -0.18
PNKP-202ENST00000593706 KLHL7Q8IXQ5 586 aa13.92□□□□□ -0.18
PNKP-202ENST00000593706 BEST3Q8N1M1 668 aa13.92□□□□□ -0.18
PNKP-202ENST00000593706 ARHGEF39Q8N4T4 335 aa13.92□□□□□ -0.18
PNKP-202ENST00000593706 AMER2Q8N7J2 671 aa13.92□□□□□ -0.18
PNKP-202ENST00000593706 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.92□□□□□ -0.18
PNKP-202ENST00000593706 ZNF354BQ96LW1 612 aa13.92□□□□□ -0.18
PNKP-202ENST00000593706 RUNDC3BQ96NL0 473 aa13.92□□□□□ -0.18
PNKP-202ENST00000593706 TRIM51Q9BSJ1 452 aa13.92□□□□□ -0.18
PNKP-202ENST00000593706 KCNK13Q9HB14 408 aa13.92□□□□□ -0.18
PNKP-202ENST00000593706 CCDC177Q9NQR7 707 aaPredicted RBP13.92□□□□□ -0.18
PNKP-202ENST00000593706 KLHL1Q9NR64 748 aa13.92□□□□□ -0.18
PNKP-202ENST00000593706 C20orf96Q9NUD7 363 aaPredicted RBP13.92□□□□□ -0.18
PNKP-202ENST00000593706 HCN3Q9P1Z3 774 aa13.92□□□□□ -0.18
PNKP-202ENST00000593706 TINAGQ9UJW2 476 aa13.92□□□□□ -0.18
PNKP-202ENST00000593706 FBXO5Q9UKT4 447 aa13.92□□□□□ -0.18
PNKP-202ENST00000593706 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.92□□□□□ -0.18
PNKP-202ENST00000593706 INTS1Q8N201 2190 aaKnown RBP13.91□□□□□ -0.18
PNKP-202ENST00000593706 H7BY64 318 aa13.91□□□□□ -0.18
PNKP-202ENST00000593706 TTI1O43156 1089 aa13.91□□□□□ -0.18
PNKP-202ENST00000593706 ZBTB14O43829 449 aa13.91□□□□□ -0.18
PNKP-202ENST00000593706 SEC31AO94979 1220 aaKnown RBP13.91□□□□□ -0.18
PNKP-202ENST00000593706 NSA2O95478 260 aaKnown RBP13.91□□□□□ -0.18
PNKP-202ENST00000593706 TTC4O95801 387 aa13.91□□□□□ -0.18
PNKP-202ENST00000593706 IL1RNP18510 177 aa13.91□□□□□ -0.18
PNKP-202ENST00000593706 GABRB3P28472 473 aa13.91□□□□□ -0.18
PNKP-202ENST00000593706 SMSP52788 366 aa13.91□□□□□ -0.18
PNKP-202ENST00000593706 RPS15AP62244 130 aaKnown RBP13.91□□□□□ -0.18
PNKP-202ENST00000593706 TBPL1P62380 186 aa13.91□□□□□ -0.18
PNKP-202ENST00000593706 CBLBQ13191 982 aa13.91□□□□□ -0.18
PNKP-202ENST00000593706 THOC5Q13769 683 aaKnown RBP13.91□□□□□ -0.18
PNKP-202ENST00000593706 ACER2Q5QJU3 275 aa13.91□□□□□ -0.18
PNKP-202ENST00000593706 XKRXQ6PP77 449 aa13.91□□□□□ -0.18
PNKP-202ENST00000593706 PRSS41Q7RTY9 318 aa13.91□□□□□ -0.18
PNKP-202ENST00000593706 PCGF5Q86SE9 256 aa13.91□□□□□ -0.18
PNKP-202ENST00000593706 C17orf53Q8N3J3 647 aaPredicted RBP13.91□□□□□ -0.18
PNKP-202ENST00000593706 FBXO15Q8NCQ5 510 aaPredicted RBP13.91□□□□□ -0.18
PNKP-202ENST00000593706 C2CD4AQ8NCU7 369 aaPredicted RBP13.91□□□□□ -0.18
PNKP-202ENST00000593706 OR51Q1Q8NH59 317 aa13.91□□□□□ -0.18
PNKP-202ENST00000593706 ZCCHC10Q8TBK6 192 aa13.91□□□□□ -0.18
PNKP-202ENST00000593706 CD200R1Q8TD46 325 aa13.91□□□□□ -0.18
PNKP-202ENST00000593706 CALML6Q8TD86 181 aa13.91□□□□□ -0.18
PNKP-202ENST00000593706 LURAP1Q96LR2 239 aa13.91□□□□□ -0.18
PNKP-202ENST00000593706 PWWP2AQ96N64 755 aa13.91□□□□□ -0.18
PNKP-202ENST00000593706 PRAP1Q96NZ9 151 aa13.91□□□□□ -0.18
PNKP-202ENST00000593706 CYTH2Q99418 400 aa13.91□□□□□ -0.18
PNKP-202ENST00000593706 FAM167BQ9BTA0 163 aa13.91□□□□□ -0.18
PNKP-202ENST00000593706 TSPAN10Q9H1Z9 355 aaPredicted RBP13.91□□□□□ -0.18
PNKP-202ENST00000593706 ANKRD10Q9NXR5 420 aa13.91□□□□□ -0.18
PNKP-202ENST00000593706 RNF14Q9UBS8 474 aa13.91□□□□□ -0.18
PNKP-202ENST00000593706 ZFHX3Q15911 3703 aa13.9□□□□□ -0.18
PNKP-202ENST00000593706 HCFC1P51610 2035 aa13.9□□□□□ -0.18
PNKP-202ENST00000593706 CCDC188H7C350 402 aa13.9□□□□□ -0.18
PNKP-202ENST00000593706 HAUS5O94927 633 aa13.9□□□□□ -0.18
PNKP-202ENST00000593706 MPC1LP0DKB6 136 aa13.9□□□□□ -0.18
PNKP-202ENST00000593706 ENO3P13929 434 aaPredicted RBP13.9□□□□□ -0.18
PNKP-202ENST00000593706 IMPA1P29218 277 aa13.9□□□□□ -0.18
PNKP-202ENST00000593706 EEF1DP29692 281 aaKnown RBP13.9□□□□□ -0.18
PNKP-202ENST00000593706 AGTR2P50052 363 aa13.9□□□□□ -0.18
PNKP-202ENST00000593706 ALDH6A1Q02252 535 aaKnown RBP13.9□□□□□ -0.18
PNKP-202ENST00000593706 TUBA3CQ13748 450 aa13.9□□□□□ -0.18
PNKP-202ENST00000593706 EXT1Q16394 746 aa13.9□□□□□ -0.18
PNKP-202ENST00000593706 C3AR1Q16581 482 aa13.9□□□□□ -0.18
PNKP-202ENST00000593706 SPANXN3Q5MJ09 141 aa13.9□□□□□ -0.18
PNKP-202ENST00000593706 STEAP4Q687X5 459 aa13.9□□□□□ -0.18
PNKP-202ENST00000593706 TUBA3EQ6PEY2 450 aa13.9□□□□□ -0.18
PNKP-202ENST00000593706 UBE2R2Q712K3 238 aaPredicted RBP13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms