RNA–Protein interactions for RNA: ENST00000592546.5

RFX2-222, Transcript of regulatory factor X2, human

APPRIS ALT1 TSL 2 BASIC

Gene RFX2, Length 2,578 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RFX2-222	ENST00000592546	LIX1L	Q8IVB5	337 aa		13.96	□□□□□ -0.17
RFX2-222	ENST00000592546	ZZZ3	Q8IYH5	903 aa		13.96	□□□□□ -0.17
RFX2-222	ENST00000592546	C7orf34	Q96L11	122 aa		13.96	□□□□□ -0.17
RFX2-222	ENST00000592546	BARHL1	Q9BZE3	327 aa		13.96	□□□□□ -0.17
RFX2-222	ENST00000592546	RUBCNL	Q9H714	662 aa		13.96	□□□□□ -0.17
RFX2-222	ENST00000592546	ELOVL2	Q9NXB9	296 aa		13.96	□□□□□ -0.17
RFX2-222	ENST00000592546	ZNF226	Q9NYT6	803 aa		13.96	□□□□□ -0.17
RFX2-222	ENST00000592546	GPRC5B	Q9NZH0	403 aa		13.96	□□□□□ -0.17
RFX2-222	ENST00000592546	TSR3	Q9UJK0	312 aa	Known RBP	13.96	□□□□□ -0.17
RFX2-222	ENST00000592546	DLGAP4	Q9Y2H0	992 aa		13.96	□□□□□ -0.17
RFX2-222	ENST00000592546	GREB1	Q4ZG55	1949 aa		13.96	□□□□□ -0.18
RFX2-222	ENST00000592546		A0A0B4J293	547 aa		13.95	□□□□□ -0.18
RFX2-222	ENST00000592546	LINC00854	A0A1B0GVQ3	168 aa		13.95	□□□□□ -0.18
RFX2-222	ENST00000592546	MOXD2P	A6NHM9	499 aa		13.95	□□□□□ -0.18
RFX2-222	ENST00000592546	IQCF5	A8MTL0	148 aa		13.95	□□□□□ -0.18
RFX2-222	ENST00000592546	WDR47	O94967	919 aa		13.95	□□□□□ -0.18
RFX2-222	ENST00000592546	KCNK5	O95279	499 aa		13.95	□□□□□ -0.18
RFX2-222	ENST00000592546	AZGP1	P25311	298 aa	Known RBP	13.95	□□□□□ -0.18
RFX2-222	ENST00000592546	NUDT1	P36639	197 aa		13.95	□□□□□ -0.18
RFX2-222	ENST00000592546	CLCN4	P51793	760 aa		13.95	□□□□□ -0.18
RFX2-222	ENST00000592546	CLCN7	P51798	805 aa		13.95	□□□□□ -0.18
RFX2-222	ENST00000592546	CD83	Q01151	205 aa		13.95	□□□□□ -0.18
RFX2-222	ENST00000592546	TEK	Q02763	1124 aa		13.95	□□□□□ -0.18
RFX2-222	ENST00000592546	EFR3A	Q14156	821 aa		13.95	□□□□□ -0.18
RFX2-222	ENST00000592546	FAM214A	Q32MH5	1076 aa		13.95	□□□□□ -0.18
RFX2-222	ENST00000592546	RTP2	Q5QGT7	225 aa		13.95	□□□□□ -0.18
RFX2-222	ENST00000592546	OR4F3	Q6IEY1	312 aa		13.95	□□□□□ -0.18
RFX2-222	ENST00000592546	TMPRSS11A	Q6ZMR5	421 aa		13.95	□□□□□ -0.18
RFX2-222	ENST00000592546	ZNF605	Q86T29	641 aa		13.95	□□□□□ -0.18
RFX2-222	ENST00000592546	RDH10	Q8IZV5	341 aa		13.95	□□□□□ -0.18
RFX2-222	ENST00000592546	SNAPC3	Q92966	411 aa		13.95	□□□□□ -0.18
RFX2-222	ENST00000592546	BHMT	Q93088	406 aa		13.95	□□□□□ -0.18
RFX2-222	ENST00000592546	RMDN1	Q96DB5	314 aa		13.95	□□□□□ -0.18
RFX2-222	ENST00000592546	RNF31	Q96EP0	1072 aa		13.95	□□□□□ -0.18
RFX2-222	ENST00000592546	MGLL	Q99685	303 aa		13.95	□□□□□ -0.18
RFX2-222	ENST00000592546	TSEN34	Q9BSV6	310 aa	Known RBP	13.95	□□□□□ -0.18
RFX2-222	ENST00000592546	COMMD10	Q9Y6G5	202 aa		13.95	□□□□□ -0.18
RFX2-222	ENST00000592546	THSD7B	Q9C0I4	1608 aa		13.95	□□□□□ -0.18
RFX2-222	ENST00000592546	EFCAB10	A6NFE3	127 aa		13.95	□□□□□ -0.18
RFX2-222	ENST00000592546	RFXANK	O14593	260 aa		13.95	□□□□□ -0.18
RFX2-222	ENST00000592546	GPX5	O75715	221 aa		13.95	□□□□□ -0.18
RFX2-222	ENST00000592546	ALPP	P05187	535 aa		13.95	□□□□□ -0.18
RFX2-222	ENST00000592546	ERP29	P30040	261 aa	Known RBP	13.95	□□□□□ -0.18
RFX2-222	ENST00000592546	IDH2	P48735	452 aa	Known RBP	13.95	□□□□□ -0.18
RFX2-222	ENST00000592546	MAPKAPK2	P49137	400 aa		13.95	□□□□□ -0.18
RFX2-222	ENST00000592546	BNC1	Q01954	994 aa		13.95	□□□□□ -0.18
RFX2-222	ENST00000592546	FAP	Q12884	760 aa		13.95	□□□□□ -0.18
RFX2-222	ENST00000592546	TARDBP	Q13148	414 aa	Known RBP eCLIP	13.95	□□□□□ -0.18
RFX2-222	ENST00000592546	TAF1A	Q15573	450 aa	Predicted RBP	13.95	□□□□□ -0.18
RFX2-222	ENST00000592546	TAB1	Q15750	504 aa		13.95	□□□□□ -0.18
RFX2-222	ENST00000592546	SYCE2	Q6PIF2	218 aa		13.95	□□□□□ -0.18
RFX2-222	ENST00000592546	TMEM173	Q86WV6	379 aa	Predicted RBP	13.95	□□□□□ -0.18
RFX2-222	ENST00000592546	FAM20C	Q8IXL6	584 aa		13.95	□□□□□ -0.18
RFX2-222	ENST00000592546	DEPDC4	Q8N2C3	294 aa		13.95	□□□□□ -0.18
RFX2-222	ENST00000592546	C9orf43	Q8TAL5	461 aa	Predicted RBP	13.95	□□□□□ -0.18
RFX2-222	ENST00000592546	SLC22A4	Q9H015	551 aa		13.95	□□□□□ -0.18
RFX2-222	ENST00000592546	ABCB8	Q9NUT2	735 aa		13.95	□□□□□ -0.18
RFX2-222	ENST00000592546	ZNF451	Q9Y4E5	1061 aa		13.95	□□□□□ -0.18
RFX2-222	ENST00000592546	ZFP37	Q9Y6Q3	630 aa	Predicted RBP	13.95	□□□□□ -0.18
RFX2-222	ENST00000592546	SLC35F4	A4IF30	521 aa		13.94	□□□□□ -0.18
RFX2-222	ENST00000592546	CCDC182	A6NF36	153 aa		13.94	□□□□□ -0.18
RFX2-222	ENST00000592546	C12orf71	A8MTZ7	269 aa		13.94	□□□□□ -0.18
RFX2-222	ENST00000592546		B4DXG7	233 aa		13.94	□□□□□ -0.18
RFX2-222	ENST00000592546		F5H5T6	163 aa		13.94	□□□□□ -0.18
RFX2-222	ENST00000592546	MANBA	O00462	879 aa		13.94	□□□□□ -0.18
RFX2-222	ENST00000592546	POLR1C	O15160	346 aa	Predicted RBP	13.94	□□□□□ -0.18
RFX2-222	ENST00000592546	PRKACB	P22694	351 aa		13.94	□□□□□ -0.18
RFX2-222	ENST00000592546	MC4R	P32245	332 aa		13.94	□□□□□ -0.18
RFX2-222	ENST00000592546	GDF5	P43026	501 aa		13.94	□□□□□ -0.18
RFX2-222	ENST00000592546	RING1	Q06587	406 aa		13.94	□□□□□ -0.18
RFX2-222	ENST00000592546	SCN1B	Q07699	218 aa		13.94	□□□□□ -0.18
RFX2-222	ENST00000592546	CSTF3	Q12996	717 aa	Known RBP	13.94	□□□□□ -0.18
RFX2-222	ENST00000592546	ASAH1	Q13510	395 aa		13.94	□□□□□ -0.18
RFX2-222	ENST00000592546	ARHGEF6	Q15052	776 aa		13.94	□□□□□ -0.18
RFX2-222	ENST00000592546	SSX1	Q16384	188 aa		13.94	□□□□□ -0.18
RFX2-222	ENST00000592546	PDE12	Q6L8Q7	609 aa	Known RBP	13.94	□□□□□ -0.18
RFX2-222	ENST00000592546	PTOV1	Q86YD1	416 aa		13.94	□□□□□ -0.18
RFX2-222	ENST00000592546	LAX1	Q8IWV1	398 aa		13.94	□□□□□ -0.18
RFX2-222	ENST00000592546	TCTE3	Q8IZS6	198 aa		13.94	□□□□□ -0.18
RFX2-222	ENST00000592546	VWA5B2	Q8N398	1253 aa		13.94	□□□□□ -0.18
RFX2-222	ENST00000592546	NATD1	Q8N6N6	113 aa		13.94	□□□□□ -0.18
RFX2-222	ENST00000592546	DENND6B	Q8NEG7	585 aa		13.94	□□□□□ -0.18
RFX2-222	ENST00000592546	COQ8B	Q96D53	544 aa		13.94	□□□□□ -0.18
RFX2-222	ENST00000592546	MAP6	Q96JE9	813 aa		13.94	□□□□□ -0.18
RFX2-222	ENST00000592546	WDFY2	Q96P53	400 aa		13.94	□□□□□ -0.18
RFX2-222	ENST00000592546	CFHR5	Q9BXR6	569 aa		13.94	□□□□□ -0.18
RFX2-222	ENST00000592546	ZNF717	Q9BY31	904 aa	Predicted RBP	13.94	□□□□□ -0.18
RFX2-222	ENST00000592546	ATP13A2	Q9NQ11	1180 aa		13.94	□□□□□ -0.18
RFX2-222	ENST00000592546	TIGAR	Q9NQ88	270 aa		13.94	□□□□□ -0.18
RFX2-222	ENST00000592546	MARCH5	Q9NX47	278 aa		13.94	□□□□□ -0.18
RFX2-222	ENST00000592546	PPT2	Q9UMR5	302 aa		13.94	□□□□□ -0.18
RFX2-222	ENST00000592546	SNX7	Q9UNH6	387 aa		13.94	□□□□□ -0.18
RFX2-222	ENST00000592546	FNDC3A	Q9Y2H6	1198 aa	Known RBP	13.94	□□□□□ -0.18
RFX2-222	ENST00000592546	OR6C70	A6NIJ9	312 aa		13.94	□□□□□ -0.18
RFX2-222	ENST00000592546	OR6C75	A6NL08	312 aa		13.94	□□□□□ -0.18
RFX2-222	ENST00000592546	GJB5	O95377	273 aa		13.94	□□□□□ -0.18
RFX2-222	ENST00000592546	GUCA1C	O95843	209 aa		13.94	□□□□□ -0.18
RFX2-222	ENST00000592546	GLUD1	P00367	558 aa		13.94	□□□□□ -0.18
RFX2-222	ENST00000592546	PRL	P01236	227 aa		13.94	□□□□□ -0.18
RFX2-222	ENST00000592546	ADRA2A	P08913	450 aa		13.94	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms