RNA–Protein interactions for RNA: ENST00000590898.5

RPRD1A-209, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 1 (best) BASIC

Gene RPRD1A, Length 1,945 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-209ENST00000590898 ESRRBO95718 433 aa16.31■□□□□ 0.2
RPRD1A-209ENST00000590898 TROVE2P10155 538 aaKnown RBP eCLIP16.31■□□□□ 0.2
RPRD1A-209ENST00000590898 MEF2AQ02078 507 aaPredicted RBP16.31■□□□□ 0.2
RPRD1A-209ENST00000590898 FOXM1Q08050 763 aa16.31■□□□□ 0.2
RPRD1A-209ENST00000590898 CAMK2BQ13554 666 aa16.31■□□□□ 0.2
RPRD1A-209ENST00000590898 MED27Q6P2C8 311 aa16.31■□□□□ 0.2
RPRD1A-209ENST00000590898 LAS2Q8IYD9 372 aa16.31■□□□□ 0.2
RPRD1A-209ENST00000590898 OR4F6Q8NGB9 312 aa16.31■□□□□ 0.2
RPRD1A-209ENST00000590898 CCT6BQ92526 530 aa16.31■□□□□ 0.2
RPRD1A-209ENST00000590898 RERGQ96A58 199 aaPredicted RBP16.31■□□□□ 0.2
RPRD1A-209ENST00000590898 TM4SF19Q96DZ7 209 aa16.31■□□□□ 0.2
RPRD1A-209ENST00000590898 TEFMQ96QE5 360 aaKnown RBP16.31■□□□□ 0.2
RPRD1A-209ENST00000590898 TAAR9Q96RI9 348 aa16.31■□□□□ 0.2
RPRD1A-209ENST00000590898 TRIM55Q9BYV6 548 aa16.31■□□□□ 0.2
RPRD1A-209ENST00000590898 ASPSCR1Q9BZE9 553 aa16.31■□□□□ 0.2
RPRD1A-209ENST00000590898 SPNS1Q9H2V7 528 aa16.31■□□□□ 0.2
RPRD1A-209ENST00000590898 RHBGQ9H310 441 aa16.31■□□□□ 0.2
RPRD1A-209ENST00000590898 EML4Q9HC35 981 aaKnown RBP16.31■□□□□ 0.2
RPRD1A-209ENST00000590898 SLC39A1Q9NY26 324 aa16.31■□□□□ 0.2
RPRD1A-209ENST00000590898 ADGRE2Q9UHX3 823 aa16.31■□□□□ 0.2
RPRD1A-209ENST00000590898 ZNF225Q9UK10 706 aa16.31■□□□□ 0.2
RPRD1A-209ENST00000590898 ZNF490Q9ULM2 529 aaPredicted RBP16.31■□□□□ 0.2
RPRD1A-209ENST00000590898 SATB2Q9UPW6 733 aa16.31■□□□□ 0.2
RPRD1A-209ENST00000590898 RNF11Q9Y3C5 154 aa16.31■□□□□ 0.2
RPRD1A-209ENST00000590898 PCDHGA3Q9Y5H0 932 aa16.31■□□□□ 0.2
RPRD1A-209ENST00000590898 FEZF1A0PJY2 475 aa16.31■□□□□ 0.2
RPRD1A-209ENST00000590898 TMEM150CB9EJG8 249 aa16.31■□□□□ 0.2
RPRD1A-209ENST00000590898 H0YGG7 62 aa16.31■□□□□ 0.2
RPRD1A-209ENST00000590898 H3BMH7 237 aa16.31■□□□□ 0.2
RPRD1A-209ENST00000590898 HCRTR1O43613 425 aa16.31■□□□□ 0.2
RPRD1A-209ENST00000590898 CHRNGP07510 517 aa16.31■□□□□ 0.2
RPRD1A-209ENST00000590898 TSPAN8P19075 237 aa16.31■□□□□ 0.2
RPRD1A-209ENST00000590898 BCL6P41182 706 aa16.31■□□□□ 0.2
RPRD1A-209ENST00000590898 ERVPABLB-1P60509 514 aa16.31■□□□□ 0.2
RPRD1A-209ENST00000590898 ARF3P61204 181 aaPredicted RBP16.31■□□□□ 0.2
RPRD1A-209ENST00000590898 ABCE1P61221 599 aaKnown RBP16.31■□□□□ 0.2
RPRD1A-209ENST00000590898 RCN2Q14257 317 aa16.31■□□□□ 0.2
RPRD1A-209ENST00000590898 GPR19Q15760 415 aa16.31■□□□□ 0.2
RPRD1A-209ENST00000590898 TMEM164Q5U3C3 297 aa16.31■□□□□ 0.2
RPRD1A-209ENST00000590898 FRMPD2BQ6IN97 320 aa16.31■□□□□ 0.2
RPRD1A-209ENST00000590898 TLDC1Q6P9B6 456 aa16.31■□□□□ 0.2
RPRD1A-209ENST00000590898 CEACAM20Q6UY09 585 aa16.31■□□□□ 0.2
RPRD1A-209ENST00000590898 GPRIN3Q6ZVF9 776 aa16.31■□□□□ 0.2
RPRD1A-209ENST00000590898 PPP1R3BQ86XI6 285 aa16.31■□□□□ 0.2
RPRD1A-209ENST00000590898 PLD3Q8IV08 490 aa16.31■□□□□ 0.2
RPRD1A-209ENST00000590898 GPR135Q8IZ08 494 aa16.31■□□□□ 0.2
RPRD1A-209ENST00000590898 LSMEM2Q8N112 164 aa16.31■□□□□ 0.2
RPRD1A-209ENST00000590898 TRPV3Q8NET8 790 aa16.31■□□□□ 0.2
RPRD1A-209ENST00000590898 REPS1Q96D71 796 aa16.31■□□□□ 0.2
RPRD1A-209ENST00000590898 PRR11Q96HE9 360 aaPredicted RBP16.31■□□□□ 0.2
RPRD1A-209ENST00000590898 DDA1Q9BW61 102 aa16.31■□□□□ 0.2
RPRD1A-209ENST00000590898 TRPS1Q9UHF7 1281 aa16.31■□□□□ 0.2
RPRD1A-209ENST00000590898 LOC105369274A0A096LPK9 316 aa16.3■□□□□ 0.2
RPRD1A-209ENST00000590898 LOC102723532A0A0G2JNH3 316 aa16.3■□□□□ 0.2
RPRD1A-209ENST00000590898 CCT8L1PA6NM43 557 aa16.3■□□□□ 0.2
RPRD1A-209ENST00000590898 TGDSO95455 350 aa16.3■□□□□ 0.2
RPRD1A-209ENST00000590898 ADRB1P08588 477 aa16.3■□□□□ 0.2
RPRD1A-209ENST00000590898 SERPINB1P30740 379 aa16.3■□□□□ 0.2
RPRD1A-209ENST00000590898 ARL1P40616 181 aaPredicted RBP16.3■□□□□ 0.2
RPRD1A-209ENST00000590898 EMP3P54852 163 aa16.3■□□□□ 0.2
RPRD1A-209ENST00000590898 ITGA1P56199 1179 aa16.3■□□□□ 0.2
RPRD1A-209ENST00000590898 PWP1Q13610 501 aa16.3■□□□□ 0.2
RPRD1A-209ENST00000590898 RTP5Q14D33 572 aa16.3■□□□□ 0.2
RPRD1A-209ENST00000590898 RBBP5Q15291 538 aaKnown RBP16.3■□□□□ 0.2
RPRD1A-209ENST00000590898 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.3■□□□□ 0.2
RPRD1A-209ENST00000590898 C3orf38Q5JPI3 329 aa16.3■□□□□ 0.2
RPRD1A-209ENST00000590898 DCAF12Q5T6F0 453 aa16.3■□□□□ 0.2
RPRD1A-209ENST00000590898 LETMD1Q6P1Q0 360 aa16.3■□□□□ 0.2
RPRD1A-209ENST00000590898 TRPM8Q7Z2W7 1104 aa16.3■□□□□ 0.2
RPRD1A-209ENST00000590898 CRLF3Q8IUI8 442 aa16.3■□□□□ 0.2
RPRD1A-209ENST00000590898 OR4N4Q8N0Y3 316 aa16.3■□□□□ 0.2
RPRD1A-209ENST00000590898 FITM2Q8N6M3 262 aa16.3■□□□□ 0.2
RPRD1A-209ENST00000590898 ZNF655Q8N720 491 aaPredicted RBP16.3■□□□□ 0.2
RPRD1A-209ENST00000590898 ANKRD53Q8N9V6 530 aa16.3■□□□□ 0.2
RPRD1A-209ENST00000590898 CAMKVQ8NCB2 501 aa16.3■□□□□ 0.2
RPRD1A-209ENST00000590898 OR7G3Q8NG95 312 aa16.3■□□□□ 0.2
RPRD1A-209ENST00000590898 AGAP11Q8TF27 550 aa16.3■□□□□ 0.2
RPRD1A-209ENST00000590898 CDK15Q96Q40 435 aa16.3■□□□□ 0.2
RPRD1A-209ENST00000590898 TMEM120AQ9BXJ8 343 aa16.3■□□□□ 0.2
RPRD1A-209ENST00000590898 PNPOQ9NVS9 261 aa16.3■□□□□ 0.2
RPRD1A-209ENST00000590898 NEUROG3Q9Y4Z2 214 aa16.3■□□□□ 0.2
RPRD1A-209ENST00000590898 A0A1B0GTL3 188 aa16.29■□□□□ 0.2
RPRD1A-209ENST00000590898 FITM1A5D6W6 292 aa16.29■□□□□ 0.2
RPRD1A-209ENST00000590898 ANKDD1BA6NHY2 528 aa16.29■□□□□ 0.2
RPRD1A-209ENST00000590898 TMEM114B3SHH9 223 aa16.29■□□□□ 0.2
RPRD1A-209ENST00000590898 UBFD1O14562 309 aaKnown RBP16.29■□□□□ 0.2
RPRD1A-209ENST00000590898 OR2B3O76000 313 aa16.29■□□□□ 0.2
RPRD1A-209ENST00000590898 ENO1P06733 434 aaKnown RBP16.29■□□□□ 0.2
RPRD1A-209ENST00000590898 FGF4P08620 206 aa16.29■□□□□ 0.2
RPRD1A-209ENST00000590898 HGFP14210 728 aa16.29■□□□□ 0.2
RPRD1A-209ENST00000590898 ITIH1P19827 911 aa16.29■□□□□ 0.2
RPRD1A-209ENST00000590898 VSX2P58304 361 aaPredicted RBP16.29■□□□□ 0.2
RPRD1A-209ENST00000590898 CPSF6Q16630 551 aaKnown RBP eCLIP16.29■□□□□ 0.22e-6■■□□□ 13.7
RPRD1A-209ENST00000590898 DEFB110Q30KQ9 67 aa16.29■□□□□ 0.2
RPRD1A-209ENST00000590898 ARL13AQ5H913 290 aaPredicted RBP16.29■□□□□ 0.2
RPRD1A-209ENST00000590898 WASHC2DQ5SRD0 308 aa16.29■□□□□ 0.2
RPRD1A-209ENST00000590898 YOD1Q5VVQ6 348 aaPredicted RBP16.29■□□□□ 0.2
RPRD1A-209ENST00000590898 VN1R4Q7Z5H5 301 aa16.29■□□□□ 0.2
RPRD1A-209ENST00000590898 MYLK4Q86YV6 388 aaPredicted RBP16.29■□□□□ 0.2
RPRD1A-209ENST00000590898 OR1L3Q8NH93 324 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms