RNA–Protein interactions for RNA: ENST00000589117.5

ZNF540-206, Transcript of zinc finger protein 540, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF540, Length 2,349 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-206ENST00000589117 SCAMP4Q969E2 229 aa7.15□□□□□ -1.27
ZNF540-206ENST00000589117 PPP1R14BQ96C90 147 aa7.15□□□□□ -1.27
ZNF540-206ENST00000589117 ABHD17AQ96GS6 310 aa7.15□□□□□ -1.27
ZNF540-206ENST00000589117 ZNF514Q96K75 400 aaPredicted RBP7.15□□□□□ -1.27
ZNF540-206ENST00000589117 FCRL1Q96LA6 429 aa7.15□□□□□ -1.27
ZNF540-206ENST00000589117 COG8Q96MW5 612 aa7.15□□□□□ -1.27
ZNF540-206ENST00000589117 NODALQ96S42 347 aa7.15□□□□□ -1.27
ZNF540-206ENST00000589117 FAM83CQ9BQN1 747 aa7.15□□□□□ -1.27
ZNF540-206ENST00000589117 INPP5KQ9BT40 448 aa7.15□□□□□ -1.27
ZNF540-206ENST00000589117 DCUN1D5Q9BTE7 237 aa7.15□□□□□ -1.27
ZNF540-206ENST00000589117 DUSP26Q9BV47 211 aa7.15□□□□□ -1.27
ZNF540-206ENST00000589117 RIOK2Q9BVS4 552 aaKnown RBP7.15□□□□□ -1.27
ZNF540-206ENST00000589117 REXO4Q9GZR2 422 aaKnown RBP7.15□□□□□ -1.27
ZNF540-206ENST00000589117 SMG9Q9H0W8 520 aaKnown RBP7.15□□□□□ -1.27
ZNF540-206ENST00000589117 SOX17Q9H6I2 414 aaPredicted RBP7.15□□□□□ -1.27
ZNF540-206ENST00000589117 FANCEQ9HB96 536 aa7.15□□□□□ -1.27
ZNF540-206ENST00000589117 SPATA6Q9NWH7 488 aaPredicted RBP7.15□□□□□ -1.27
ZNF540-206ENST00000589117 KIF17Q9P2E2 1029 aa7.15□□□□□ -1.27
ZNF540-206ENST00000589117 WARS2Q9UGM6 360 aaKnown RBP7.15□□□□□ -1.27
ZNF540-206ENST00000589117 CDC14AQ9UNH5 594 aa7.15□□□□□ -1.27
ZNF540-206ENST00000589117 NEUROG3Q9Y4Z2 214 aa7.15□□□□□ -1.27
ZNF540-206ENST00000589117 INSL6Q9Y581 213 aa7.15□□□□□ -1.27
ZNF540-206ENST00000589117 PCDHGA8Q9Y5G5 932 aa7.15□□□□□ -1.27
ZNF540-206ENST00000589117 IRAK3Q9Y616 596 aa7.15□□□□□ -1.27
ZNF540-206ENST00000589117 ZNF106Q9H2Y7 1883 aaKnown RBP7.14□□□□□ -1.27
ZNF540-206ENST00000589117 HTTP42858 3142 aa7.14□□□□□ -1.27
ZNF540-206ENST00000589117 GNG14A0A1W2PPG7 69 aa7.14□□□□□ -1.27
ZNF540-206ENST00000589117 TSPAN11A1L157 253 aa7.14□□□□□ -1.27
ZNF540-206ENST00000589117 MYO1GB0I1T2 1018 aa7.14□□□□□ -1.27
ZNF540-206ENST00000589117 H3BM21 787 aa7.14□□□□□ -1.27
ZNF540-206ENST00000589117 BCKDKO14874 412 aa7.14□□□□□ -1.27
ZNF540-206ENST00000589117 AREL1O15033 823 aa7.14□□□□□ -1.27
ZNF540-206ENST00000589117 TPD52L2O43399 206 aaKnown RBP7.14□□□□□ -1.27
ZNF540-206ENST00000589117 MTX2O75431 263 aa7.14□□□□□ -1.27
ZNF540-206ENST00000589117 SEC14L2O76054 403 aa7.14□□□□□ -1.27
ZNF540-206ENST00000589117 ANXA4P09525 319 aaPredicted RBP7.14□□□□□ -1.27
ZNF540-206ENST00000589117 ACRP10323 421 aa7.14□□□□□ -1.27
ZNF540-206ENST00000589117 ITGAMP11215 1152 aa7.14□□□□□ -1.27
ZNF540-206ENST00000589117 CSF2RAP15509 400 aa7.14□□□□□ -1.27
ZNF540-206ENST00000589117 TACR1P25103 407 aa7.14□□□□□ -1.27
ZNF540-206ENST00000589117 ETV3P41162 512 aa7.14□□□□□ -1.27
ZNF540-206ENST00000589117 GZMMP51124 257 aa7.14□□□□□ -1.27
ZNF540-206ENST00000589117 EPHA5P54756 1037 aa7.14□□□□□ -1.27
ZNF540-206ENST00000589117 CSNK2BP67870 215 aa7.14□□□□□ -1.27
ZNF540-206ENST00000589117 TMEM115Q12893 351 aaPredicted RBP7.14□□□□□ -1.27
ZNF540-206ENST00000589117 DDX39BQ13838 428 aaKnown RBP7.14□□□□□ -1.27
ZNF540-206ENST00000589117 GTF2H3Q13889 308 aa7.14□□□□□ -1.27
ZNF540-206ENST00000589117 DOC2AQ14183 400 aa7.14□□□□□ -1.27
ZNF540-206ENST00000589117 ACOX1Q15067 660 aa7.14□□□□□ -1.27
ZNF540-206ENST00000589117 ZNF829Q3KNS6 432 aaPredicted RBP7.14□□□□□ -1.27
ZNF540-206ENST00000589117 GTDC1Q4AE62 458 aa7.14□□□□□ -1.27
ZNF540-206ENST00000589117 LY6G5CQ5SRR4 150 aa7.14□□□□□ -1.27
ZNF540-206ENST00000589117 CAPN13Q6MZZ7 669 aaPredicted RBP7.14□□□□□ -1.27
ZNF540-206ENST00000589117 MED27Q6P2C8 311 aa7.14□□□□□ -1.27
ZNF540-206ENST00000589117 RFLNAQ6ZTI6 216 aa7.14□□□□□ -1.27
ZNF540-206ENST00000589117 EP400NLQ6ZTU2 488 aa7.14□□□□□ -1.27
ZNF540-206ENST00000589117 DPPA4Q7L190 304 aa7.14□□□□□ -1.27
ZNF540-206ENST00000589117 HSD11B1LQ7Z5J1 315 aa7.14□□□□□ -1.27
ZNF540-206ENST00000589117 TMCO2Q7Z6W1 182 aaPredicted RBP7.14□□□□□ -1.27
ZNF540-206ENST00000589117 ADIPOR2Q86V24 386 aa7.14□□□□□ -1.27
ZNF540-206ENST00000589117 VRK3Q8IV63 474 aa7.14□□□□□ -1.27
ZNF540-206ENST00000589117 SULF2Q8IWU5 870 aa7.14□□□□□ -1.27
ZNF540-206ENST00000589117 KLHL23Q8NBE8 558 aa7.14□□□□□ -1.27
ZNF540-206ENST00000589117 B4GALNT2Q8NHY0 566 aa7.14□□□□□ -1.27
ZNF540-206ENST00000589117 CDC26Q8NHZ8 85 aa7.14□□□□□ -1.27
ZNF540-206ENST00000589117 WFIKKN2Q8TEU8 576 aa7.14□□□□□ -1.27
ZNF540-206ENST00000589117 UBE2E3Q969T4 207 aa7.14□□□□□ -1.27
ZNF540-206ENST00000589117 AP2M1Q96CW1 435 aa7.14□□□□□ -1.27
ZNF540-206ENST00000589117 MTERF1Q99551 399 aaKnown RBP7.14□□□□□ -1.27
ZNF540-206ENST00000589117 TCF25Q9BQ70 676 aa7.14□□□□□ -1.27
ZNF540-206ENST00000589117 LIN28AQ9H9Z2 209 aaKnown RBP7.14□□□□□ -1.27
ZNF540-206ENST00000589117 CCNB1IP1Q9NPC3 277 aa7.14□□□□□ -1.27
ZNF540-206ENST00000589117 BTNL2Q9UIR0 455 aa7.14□□□□□ -1.27
ZNF540-206ENST00000589117 PSME2Q9UL46 239 aa7.14□□□□□ -1.27
ZNF540-206ENST00000589117 TMPRSS11EQ9UL52 423 aa7.14□□□□□ -1.27
ZNF540-206ENST00000589117 VPS4AQ9UN37 437 aa7.14□□□□□ -1.27
ZNF540-206ENST00000589117 CCL26Q9Y258 94 aa7.14□□□□□ -1.27
ZNF540-206ENST00000589117 GMEB1Q9Y692 573 aa7.14□□□□□ -1.27
ZNF540-206ENST00000589117 A0A1B0GVG6 124 aa7.13□□□□□ -1.27
ZNF540-206ENST00000589117 H0Y858 1186 aa7.13□□□□□ -1.27
ZNF540-206ENST00000589117 DPM1O60762 260 aa7.13□□□□□ -1.27
ZNF540-206ENST00000589117 MRPS14O60783 128 aaKnown RBP7.13□□□□□ -1.27
ZNF540-206ENST00000589117 KCNK5O95279 499 aa7.13□□□□□ -1.27
ZNF540-206ENST00000589117 CPSF4O95639 269 aaKnown RBP7.13□□□□□ -1.27
ZNF540-206ENST00000589117 PRNPP04156 253 aa7.13□□□□□ -1.27
ZNF540-206ENST00000589117 DDX5P17844 614 aaKnown RBP7.13□□□□□ -1.27
ZNF540-206ENST00000589117 FPR1P21462 350 aa7.13□□□□□ -1.27
ZNF540-206ENST00000589117 PTPN6P29350 595 aa7.13□□□□□ -1.27
ZNF540-206ENST00000589117 YAP1P46937 504 aaKnown RBP7.13□□□□□ -1.27
ZNF540-206ENST00000589117 PRLHRP49683 370 aa7.13□□□□□ -1.27
ZNF540-206ENST00000589117 IST1P53990 364 aa7.13□□□□□ -1.27
ZNF540-206ENST00000589117 CXCR4P61073 352 aa7.13□□□□□ -1.27
ZNF540-206ENST00000589117 IL5RAQ01344 420 aa7.13□□□□□ -1.27
ZNF540-206ENST00000589117 LAPTM5Q13571 262 aa7.13□□□□□ -1.27
ZNF540-206ENST00000589117 KEAP1Q14145 624 aa7.13□□□□□ -1.27
ZNF540-206ENST00000589117 TEAD2Q15562 447 aa7.13□□□□□ -1.27
ZNF540-206ENST00000589117 LRRC73Q5JTD7 316 aa7.13□□□□□ -1.27
ZNF540-206ENST00000589117 ZNF691Q5VV52 312 aa7.13□□□□□ -1.27
ZNF540-206ENST00000589117 SERPINA13PQ6UXR4 307 aa7.13□□□□□ -1.27
ZNF540-206ENST00000589117 EIF3MQ7L2H7 374 aaKnown RBP7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms