RNA–Protein interactions for RNA: ENST00000588555.1

SCAMP4-210, Transcript of secretory carrier membrane protein 4, humanhuman

Gene SCAMP4, Length 1,785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-210ENST00000588555 PPP1CAP62136 330 aa24.91■■□□□ 1.58
SCAMP4-210ENST00000588555 DUOXA1Q1HG43 343 aa24.91■■□□□ 1.58
SCAMP4-210ENST00000588555 DNAL1Q4LDG9 190 aa24.91■■□□□ 1.58
SCAMP4-210ENST00000588555 DEPDC1Q5TB30 811 aa24.91■■□□□ 1.58
SCAMP4-210ENST00000588555 KHDRBS2Q5VWX1 349 aaKnown RBP24.91■■□□□ 1.58
SCAMP4-210ENST00000588555 REP15Q6BDI9 236 aa24.91■■□□□ 1.58
SCAMP4-210ENST00000588555 WDR87Q6ZQQ6 2873 aa24.91■■□□□ 1.58
SCAMP4-210ENST00000588555 CLHC1Q8NHS4 586 aa24.91■■□□□ 1.58
SCAMP4-210ENST00000588555 SPDL1Q96EA4 605 aa24.91■■□□□ 1.58
SCAMP4-210ENST00000588555 PPM1MQ96MI6 270 aa24.91■■□□□ 1.58
SCAMP4-210ENST00000588555 TMEM74Q96NL1 305 aa24.91■■□□□ 1.58
SCAMP4-210ENST00000588555 CAPN10Q9HC96 672 aa24.91■■□□□ 1.58
SCAMP4-210ENST00000588555 PRM3Q9NNZ6 103 aa24.91■■□□□ 1.58
SCAMP4-210ENST00000588555 PCDHGA4Q9Y5G9 962 aa24.91■■□□□ 1.58
SCAMP4-210ENST00000588555 ARID1BQ8NFD5 2236 aaPredicted RBP24.91■■□□□ 1.58
SCAMP4-210ENST00000588555 BBIP1A8MTZ0 92 aa24.9■■□□□ 1.58
SCAMP4-210ENST00000588555 SAP18O00422 153 aaKnown RBP24.9■■□□□ 1.58
SCAMP4-210ENST00000588555 UBXN7O94888 489 aa24.9■■□□□ 1.58
SCAMP4-210ENST00000588555 PCSK2P16519 638 aa24.9■■□□□ 1.58
SCAMP4-210ENST00000588555 GSTM2P28161 218 aa24.9■■□□□ 1.58
SCAMP4-210ENST00000588555 AHRP35869 848 aa24.9■■□□□ 1.58
SCAMP4-210ENST00000588555 CLDN8P56748 225 aa24.9■■□□□ 1.58
SCAMP4-210ENST00000588555 HLA-BQ31612 363 aa24.9■■□□□ 1.58
SCAMP4-210ENST00000588555 FCRL6Q6DN72 434 aa24.9■■□□□ 1.58
SCAMP4-210ENST00000588555 COMMD6Q7Z4G1 85 aa24.9■■□□□ 1.58
SCAMP4-210ENST00000588555 RETREG3Q86VR2 466 aa24.9■■□□□ 1.58
SCAMP4-210ENST00000588555 KRTCAP2Q8N6L1 136 aa24.9■■□□□ 1.58
SCAMP4-210ENST00000588555 EGLN2Q96KS0 407 aa24.9■■□□□ 1.58
SCAMP4-210ENST00000588555 TSSK3Q96PN8 268 aa24.9■■□□□ 1.58
SCAMP4-210ENST00000588555 DPY30Q9C005 99 aa24.9■■□□□ 1.58
SCAMP4-210ENST00000588555 ANKMY1Q9P2S6 941 aa24.9■■□□□ 1.58
SCAMP4-210ENST00000588555 POMT2Q9UKY4 750 aa24.9■■□□□ 1.58
SCAMP4-210ENST00000588555 AP1M2Q9Y6Q5 423 aa24.9■■□□□ 1.58
SCAMP4-210ENST00000588555 MDC1Q14676 2089 aaKnown RBP24.9■■□□□ 1.58
SCAMP4-210ENST00000588555 A0A1W2PP18 115 aa24.9■■□□□ 1.58
SCAMP4-210ENST00000588555 ASPDHA6ND91 283 aa24.9■■□□□ 1.58
SCAMP4-210ENST00000588555 SEMA3DO95025 777 aa24.9■■□□□ 1.58
SCAMP4-210ENST00000588555 CFIP05156 583 aa24.9■■□□□ 1.58
SCAMP4-210ENST00000588555 TIA1P31483 386 aaKnown RBP eCLIP24.9■■□□□ 1.58
SCAMP4-210ENST00000588555 KCNK10P57789 538 aa24.9■■□□□ 1.58
SCAMP4-210ENST00000588555 ZIC1Q15915 447 aa24.9■■□□□ 1.58
SCAMP4-210ENST00000588555 SLC35F3Q8IY50 421 aa24.9■■□□□ 1.58
SCAMP4-210ENST00000588555 FAM9CQ8IZT9 166 aa24.9■■□□□ 1.58
SCAMP4-210ENST00000588555 ARL10Q8N8L6 244 aa24.9■■□□□ 1.58
SCAMP4-210ENST00000588555 MFSD9Q8NBP5 474 aa24.9■■□□□ 1.58
SCAMP4-210ENST00000588555 VPS33AQ96AX1 596 aa24.9■■□□□ 1.58
SCAMP4-210ENST00000588555 CLMPQ9H6B4 373 aa24.9■■□□□ 1.58
SCAMP4-210ENST00000588555 A0A0J9YY10 115 aa24.89■■□□□ 1.57
SCAMP4-210ENST00000588555 DPP6P42658 865 aa24.89■■□□□ 1.57
SCAMP4-210ENST00000588555 COQ5Q5HYK3 327 aa24.89■■□□□ 1.57
SCAMP4-210ENST00000588555 FIGLAQ6QHK4 219 aa24.89■■□□□ 1.57
SCAMP4-210ENST00000588555 RIPOR1Q6ZS17 1223 aa24.89■■□□□ 1.57
SCAMP4-210ENST00000588555 RABEPKQ7Z6M1 372 aa24.89■■□□□ 1.57
SCAMP4-210ENST00000588555 RIMKLAQ8IXN7 391 aa24.89■■□□□ 1.57
SCAMP4-210ENST00000588555 DSELQ8IZU8 1212 aa24.89■■□□□ 1.57
SCAMP4-210ENST00000588555 TBC1D19Q8N5T2 526 aa24.89■■□□□ 1.57
SCAMP4-210ENST00000588555 GLB1L3Q8NCI6 653 aaPredicted RBP24.89■■□□□ 1.57
SCAMP4-210ENST00000588555 WDR48Q8TAF3 677 aa24.89■■□□□ 1.57
SCAMP4-210ENST00000588555 CEP76Q8TAP6 659 aa24.89■■□□□ 1.57
SCAMP4-210ENST00000588555 F2RL3Q96RI0 385 aa24.89■■□□□ 1.57
SCAMP4-210ENST00000588555 SLC38A3Q99624 504 aa24.89■■□□□ 1.57
SCAMP4-210ENST00000588555 ZNF717Q9BY31 904 aaPredicted RBP24.89■■□□□ 1.57
SCAMP4-210ENST00000588555 AICDAQ9GZX7 198 aa24.89■■□□□ 1.57
SCAMP4-210ENST00000588555 PCDH15Q96QU1 1955 aa24.89■■□□□ 1.57
SCAMP4-210ENST00000588555 PATE3B3GLJ2 98 aa24.88■■□□□ 1.57
SCAMP4-210ENST00000588555 PLPP1O14494 284 aa24.88■■□□□ 1.57
SCAMP4-210ENST00000588555 ZW10O43264 779 aa24.88■■□□□ 1.57
SCAMP4-210ENST00000588555 MYO1DO94832 1006 aa24.88■■□□□ 1.57
SCAMP4-210ENST00000588555 CAPZBP47756 277 aa24.88■■□□□ 1.57
SCAMP4-210ENST00000588555 MMEL1Q495T6 779 aa24.88■■□□□ 1.57
SCAMP4-210ENST00000588555 PRR23BQ6ZRT6 265 aa24.88■■□□□ 1.57
SCAMP4-210ENST00000588555 SAP25Q8TEE9 199 aa24.88■■□□□ 1.57
SCAMP4-210ENST00000588555 ZUFSPQ96AP4 578 aa24.88■■□□□ 1.57
SCAMP4-210ENST00000588555 NDUFAF1Q9Y375 327 aa24.88■■□□□ 1.57
SCAMP4-210ENST00000588555 RNF215Q9Y6U7 377 aa24.88■■□□□ 1.57
SCAMP4-210ENST00000588555 GOLGA4Q13439 2230 aaKnown RBP24.88■■□□□ 1.57
SCAMP4-210ENST00000588555 MRASO14807 208 aa24.88■■□□□ 1.57
SCAMP4-210ENST00000588555 PCDH7O60245 1069 aa24.88■■□□□ 1.57
SCAMP4-210ENST00000588555 CTSVO60911 334 aa24.88■■□□□ 1.57
SCAMP4-210ENST00000588555 ANXA4P09525 319 aaPredicted RBP24.88■■□□□ 1.57
SCAMP4-210ENST00000588555 HNRNPH1P31943 449 aaKnown RBP24.88■■□□□ 1.57
SCAMP4-210ENST00000588555 RPS15AP62244 130 aaKnown RBP24.88■■□□□ 1.57
SCAMP4-210ENST00000588555 HYAL2Q12891 473 aa24.88■■□□□ 1.57
SCAMP4-210ENST00000588555 BIRC2Q13490 618 aa24.88■■□□□ 1.57
SCAMP4-210ENST00000588555 TIGD2Q4W5G0 525 aa24.88■■□□□ 1.57
SCAMP4-210ENST00000588555 FBXO42Q6P3S6 717 aa24.88■■□□□ 1.57
SCAMP4-210ENST00000588555 KLHL35Q6PF15 583 aa24.88■■□□□ 1.57
SCAMP4-210ENST00000588555 ABCG4Q9H172 646 aa24.88■■□□□ 1.57
SCAMP4-210ENST00000588555 IL21RQ9HBE5 538 aa24.88■■□□□ 1.57
SCAMP4-210ENST00000588555 MAP10Q9P2G4 905 aa24.88■■□□□ 1.57
SCAMP4-210ENST00000588555 PILRAQ9UKJ1 303 aa24.88■■□□□ 1.57
SCAMP4-210ENST00000588555 ADAMTS9Q9P2N4 1935 aa24.87■■□□□ 1.57
SCAMP4-210ENST00000588555 DYTNA2CJ06 578 aa24.87■■□□□ 1.57
SCAMP4-210ENST00000588555 LRIT2A6NDA9 550 aa24.87■■□□□ 1.57
SCAMP4-210ENST00000588555 CCDC154A6NI56 674 aa24.87■■□□□ 1.57
SCAMP4-210ENST00000588555 ANGPT2O15123 496 aa24.87■■□□□ 1.57
SCAMP4-210ENST00000588555 EEDO75530 441 aaKnown RBP24.87■■□□□ 1.57
SCAMP4-210ENST00000588555 KLHL18O94889 574 aa24.87■■□□□ 1.57
SCAMP4-210ENST00000588555 PROS1P07225 676 aa24.87■■□□□ 1.57
SCAMP4-210ENST00000588555 PVRP15151 417 aa24.87■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms