RNA–Protein interactions for RNA: ENST00000588477.5

IFT20-216, Transcript of intraflagellar transport 20, humanhuman

TSL 5 BASIC

Gene IFT20, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-216ENST00000588477 HSD17B2P37059 387 aa14.35□□□□□ -0.11
IFT20-216ENST00000588477 CYB561P49447 251 aa14.35□□□□□ -0.11
IFT20-216ENST00000588477 SLC26A5P58743 744 aa14.35□□□□□ -0.11
IFT20-216ENST00000588477 ABATP80404 500 aa14.35□□□□□ -0.11
IFT20-216ENST00000588477 TAP2Q03519 686 aa14.35□□□□□ -0.11
IFT20-216ENST00000588477 KLF1Q13351 362 aaPredicted RBP14.35□□□□□ -0.11
IFT20-216ENST00000588477 USP10Q14694 798 aaKnown RBP14.35□□□□□ -0.11
IFT20-216ENST00000588477 ABRAXAS2Q15018 415 aa14.35□□□□□ -0.11
IFT20-216ENST00000588477 PCID2Q5JVF3 399 aa14.35□□□□□ -0.11
IFT20-216ENST00000588477 THEMIS2Q5TEJ8 643 aa14.35□□□□□ -0.11
IFT20-216ENST00000588477 ZNF227Q86WZ6 799 aa14.35□□□□□ -0.11
IFT20-216ENST00000588477 LGI4Q8N135 537 aa14.35□□□□□ -0.11
IFT20-216ENST00000588477 KIF2BQ8N4N8 673 aa14.35□□□□□ -0.11
IFT20-216ENST00000588477 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.35□□□□□ -0.11
IFT20-216ENST00000588477 ZNF480Q8WV37 535 aa14.35□□□□□ -0.11
IFT20-216ENST00000588477 EBNA1BP2Q99848 306 aaKnown RBP14.35□□□□□ -0.11
IFT20-216ENST00000588477 RBCK1Q9BYM8 510 aa14.35□□□□□ -0.11
IFT20-216ENST00000588477 FAM114A2Q9NRY5 505 aa14.35□□□□□ -0.11
IFT20-216ENST00000588477 CCM2LQ9NUG4 571 aaPredicted RBP14.35□□□□□ -0.11
IFT20-216ENST00000588477 ACANP16112 2415 aa14.35□□□□□ -0.11
IFT20-216ENST00000588477 HS6ST1O60243 411 aa14.34□□□□□ -0.11
IFT20-216ENST00000588477 SYF2O95926 243 aaKnown RBP14.34□□□□□ -0.11
IFT20-216ENST00000588477 IFNB1P01574 187 aa14.34□□□□□ -0.11
IFT20-216ENST00000588477 CATP04040 527 aaKnown RBP14.34□□□□□ -0.11
IFT20-216ENST00000588477 HOXD4P09016 255 aaPredicted RBP14.34□□□□□ -0.11
IFT20-216ENST00000588477 NMBRP28336 390 aa14.34□□□□□ -0.11
IFT20-216ENST00000588477 STIP1P31948 543 aaKnown RBP14.34□□□□□ -0.11
IFT20-216ENST00000588477 RFC3P40938 356 aa14.34□□□□□ -0.11
IFT20-216ENST00000588477 MEOX1P50221 254 aa14.34□□□□□ -0.11
IFT20-216ENST00000588477 OR4D2P58180 307 aa14.34□□□□□ -0.11
IFT20-216ENST00000588477 PPP2R2AP63151 447 aa14.34□□□□□ -0.11
IFT20-216ENST00000588477 CRADDP78560 199 aa14.34□□□□□ -0.11
IFT20-216ENST00000588477 RHAGQ02094 409 aa14.34□□□□□ -0.11
IFT20-216ENST00000588477 MYBPHQ13203 477 aa14.34□□□□□ -0.11
IFT20-216ENST00000588477 TBX2Q13207 712 aaPredicted RBP14.34□□□□□ -0.11
IFT20-216ENST00000588477 KCNJ11Q14654 390 aa14.34□□□□□ -0.11
IFT20-216ENST00000588477 ACSBG2Q5FVE4 666 aa14.34□□□□□ -0.11
IFT20-216ENST00000588477 VN1R4Q7Z5H5 301 aa14.34□□□□□ -0.11
IFT20-216ENST00000588477 PCGF5Q86SE9 256 aa14.34□□□□□ -0.11
IFT20-216ENST00000588477 PRUNE1Q86TP1 453 aa14.34□□□□□ -0.11
IFT20-216ENST00000588477 CCDC71Q8IV32 467 aaPredicted RBP14.34□□□□□ -0.11
IFT20-216ENST00000588477 MPP5Q8N3R9 675 aa14.34□□□□□ -0.11
IFT20-216ENST00000588477 RPRMLQ8N4K4 120 aa14.34□□□□□ -0.11
IFT20-216ENST00000588477 TC2NQ8N9U0 490 aa14.34□□□□□ -0.11
IFT20-216ENST00000588477 CHDHQ8NE62 594 aaPredicted RBP14.34□□□□□ -0.11
IFT20-216ENST00000588477 PLPP5Q8NEB5 264 aa14.34□□□□□ -0.11
IFT20-216ENST00000588477 ZCCHC10Q8TBK6 192 aa14.34□□□□□ -0.11
IFT20-216ENST00000588477 ELP5Q8TE02 316 aa14.34□□□□□ -0.11
IFT20-216ENST00000588477 ATG4AQ8WYN0 398 aa14.34□□□□□ -0.11
IFT20-216ENST00000588477 RND1Q92730 232 aa14.34□□□□□ -0.11
IFT20-216ENST00000588477 TSLPQ969D9 159 aa14.34□□□□□ -0.11
IFT20-216ENST00000588477 TMEM125Q96AQ2 219 aa14.34□□□□□ -0.11
IFT20-216ENST00000588477 PEX11GQ96HA9 241 aa14.34□□□□□ -0.11
IFT20-216ENST00000588477 CALR3Q96L12 384 aaKnown RBP14.34□□□□□ -0.11
IFT20-216ENST00000588477 FOXC2Q99958 501 aa14.34□□□□□ -0.11
IFT20-216ENST00000588477 CXXC4Q9H2H0 198 aa14.34□□□□□ -0.11
IFT20-216ENST00000588477 GSX1Q9H4S2 264 aaPredicted RBP14.34□□□□□ -0.11
IFT20-216ENST00000588477 ANKHQ9HCJ1 492 aa14.34□□□□□ -0.11
IFT20-216ENST00000588477 TREX1Q9NSU2 369 aa14.34□□□□□ -0.11
IFT20-216ENST00000588477 KCNN3Q9UGI6 736 aa14.34□□□□□ -0.11
IFT20-216ENST00000588477 PACSIN2Q9UNF0 486 aaPredicted RBP14.34□□□□□ -0.11
IFT20-216ENST00000588477 CRYL1Q9Y2S2 319 aa14.34□□□□□ -0.11
IFT20-216ENST00000588477 AKAP6Q13023 2319 aa14.33□□□□□ -0.11
IFT20-216ENST00000588477 A0A1B0GTL3 188 aa14.33□□□□□ -0.12
IFT20-216ENST00000588477 USP27XA6NNY8 438 aa14.33□□□□□ -0.12
IFT20-216ENST00000588477 CDK2AP1O14519 115 aa14.33□□□□□ -0.12
IFT20-216ENST00000588477 KIF5CO60282 957 aa14.33□□□□□ -0.12
IFT20-216ENST00000588477 PRMT3O60678 531 aa14.33□□□□□ -0.12
IFT20-216ENST00000588477 RDH16O75452 317 aa14.33□□□□□ -0.12
IFT20-216ENST00000588477 FAM155BO75949 473 aa14.33□□□□□ -0.12
IFT20-216ENST00000588477 ZWINTO95229 277 aa14.33□□□□□ -0.12
IFT20-216ENST00000588477 APRTP07741 180 aa14.33□□□□□ -0.12
IFT20-216ENST00000588477 ETS1P14921 441 aa14.33□□□□□ -0.12
IFT20-216ENST00000588477 TFEBP19484 476 aa14.33□□□□□ -0.12
IFT20-216ENST00000588477 CYLC1P35663 651 aaPredicted RBP14.33□□□□□ -0.12
IFT20-216ENST00000588477 ITGA8P53708 1063 aa14.33□□□□□ -0.12
IFT20-216ENST00000588477 SESN2P58004 480 aaPredicted RBP14.33□□□□□ -0.12
IFT20-216ENST00000588477 RPS15AP62244 130 aaKnown RBP14.33□□□□□ -0.12
IFT20-216ENST00000588477 TMEM214Q6NUQ4 689 aaKnown RBP14.33□□□□□ -0.12
IFT20-216ENST00000588477 PDSS2Q86YH6 399 aa14.33□□□□□ -0.12
IFT20-216ENST00000588477 SULF2Q8IWU5 870 aa14.33□□□□□ -0.12
IFT20-216ENST00000588477 CCDC170Q8IYT3 715 aa14.33□□□□□ -0.12
IFT20-216ENST00000588477 POGLUT1Q8NBL1 392 aa14.33□□□□□ -0.12
IFT20-216ENST00000588477 KCT2Q8NC54 265 aa14.33□□□□□ -0.12
IFT20-216ENST00000588477 CCDC138Q96M89 665 aa14.33□□□□□ -0.12
IFT20-216ENST00000588477 TP63Q9H3D4 680 aaPredicted RBP14.33□□□□□ -0.12
IFT20-216ENST00000588477 RAB6BQ9NRW1 208 aa14.33□□□□□ -0.12
IFT20-216ENST00000588477 TMEM184CQ9NVA4 438 aa14.33□□□□□ -0.12
IFT20-216ENST00000588477 AMFRQ9UKV5 643 aa14.33□□□□□ -0.12
IFT20-216ENST00000588477 ABCA4P78363 2273 aa14.32□□□□□ -0.12
IFT20-216ENST00000588477 VPS13CQ709C8 3753 aa14.32□□□□□ -0.12
IFT20-216ENST00000588477 KCNE1BA0A087WTH5 132 aa14.32□□□□□ -0.12
IFT20-216ENST00000588477 MAGEB17A8MXT2 336 aa14.32□□□□□ -0.12
IFT20-216ENST00000588477 GOLGA8KD6RF30 607 aa14.32□□□□□ -0.12
IFT20-216ENST00000588477 E5RI56 91 aa14.32□□□□□ -0.12
IFT20-216ENST00000588477 GOLGA8TH3BQL2 631 aa14.32□□□□□ -0.12
IFT20-216ENST00000588477 KLRC4-KLRK1H3BQV0 150 aa14.32□□□□□ -0.12
IFT20-216ENST00000588477 PDE9AO76083 593 aa14.32□□□□□ -0.12
IFT20-216ENST00000588477 FOLH1Q04609 750 aa14.32□□□□□ -0.12
IFT20-216ENST00000588477 PMPCAQ10713 525 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms