RNA–Protein interactions for RNA: ENST00000587945.1

VMP1-206, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-206ENST00000587945 OR4K3Q96R72 315 aa13.55□□□□□ -0.24
VMP1-206ENST00000587945 OLFM1Q99784 485 aa13.55□□□□□ -0.24
VMP1-206ENST00000587945 SLX1AQ9BQ83 275 aa13.55□□□□□ -0.24
VMP1-206ENST00000587945 TUBB6Q9BUF5 446 aa13.55□□□□□ -0.24
VMP1-206ENST00000587945 ANKHQ9HCJ1 492 aa13.55□□□□□ -0.24
VMP1-206ENST00000587945 IKZF3Q9UKT9 509 aa13.55□□□□□ -0.24
VMP1-206ENST00000587945 PCM1Q15154 2024 aa13.55□□□□□ -0.24
VMP1-206ENST00000587945 UNC79Q9P2D8 2635 aa13.55□□□□□ -0.24
VMP1-206ENST00000587945 DOPEY1Q5JWR5 2465 aa13.54□□□□□ -0.24
VMP1-206ENST00000587945 DOCK10Q96BY6 2186 aa13.54□□□□□ -0.24
VMP1-206ENST00000587945 POLEQ07864 2286 aa13.54□□□□□ -0.24
VMP1-206ENST00000587945 DNAJB6O75190 326 aa13.54□□□□□ -0.24
VMP1-206ENST00000587945 CDC123O75794 336 aaPredicted RBP13.54□□□□□ -0.24
VMP1-206ENST00000587945 GUCA1CO95843 209 aa13.54□□□□□ -0.24
VMP1-206ENST00000587945 B3GALT4O96024 378 aa13.54□□□□□ -0.24
VMP1-206ENST00000587945 HIST1H2AGP0C0S8 130 aaPredicted RBP13.54□□□□□ -0.24
VMP1-206ENST00000587945 ICAM2P13598 275 aa13.54□□□□□ -0.24
VMP1-206ENST00000587945 HIST1H2ADP20671 130 aa13.54□□□□□ -0.24
VMP1-206ENST00000587945 GRK3P35626 688 aa13.54□□□□□ -0.24
VMP1-206ENST00000587945 DCTP40126 519 aa13.54□□□□□ -0.24
VMP1-206ENST00000587945 ST13P50502 369 aaKnown RBP13.54□□□□□ -0.24
VMP1-206ENST00000587945 KCNK10P57789 538 aa13.54□□□□□ -0.24
VMP1-206ENST00000587945 IL2P60568 153 aa13.54□□□□□ -0.24
VMP1-206ENST00000587945 ZNF33BQ06732 778 aa13.54□□□□□ -0.24
VMP1-206ENST00000587945 BTBD16Q32M84 506 aa13.54□□□□□ -0.24
VMP1-206ENST00000587945 CATSPEREQ5SY80 951 aa13.54□□□□□ -0.24
VMP1-206ENST00000587945 ABHD17BQ5VST6 288 aa13.54□□□□□ -0.24
VMP1-206ENST00000587945 ZNF324BQ6AW86 544 aaPredicted RBP13.54□□□□□ -0.24
VMP1-206ENST00000587945 FCRLBQ6BAA4 426 aa13.54□□□□□ -0.24
VMP1-206ENST00000587945 ANKRD37Q7Z713 158 aa13.54□□□□□ -0.24
VMP1-206ENST00000587945 LURAP1LQ8IV03 231 aa13.54□□□□□ -0.24
VMP1-206ENST00000587945 MFSD9Q8NBP5 474 aa13.54□□□□□ -0.24
VMP1-206ENST00000587945 OR5T3Q8NGG3 340 aa13.54□□□□□ -0.24
VMP1-206ENST00000587945 GABPB2Q8TAK5 448 aaPredicted RBP13.54□□□□□ -0.24
VMP1-206ENST00000587945 SLCO2A1Q92959 643 aa13.54□□□□□ -0.24
VMP1-206ENST00000587945 SNF8Q96H20 258 aa13.54□□□□□ -0.24
VMP1-206ENST00000587945 PEX11GQ96HA9 241 aa13.54□□□□□ -0.24
VMP1-206ENST00000587945 HIST1H2AHQ96KK5 128 aa13.54□□□□□ -0.24
VMP1-206ENST00000587945 HIST1H2AJQ99878 128 aa13.54□□□□□ -0.24
VMP1-206ENST00000587945 NAT9Q9BTE0 207 aa13.54□□□□□ -0.24
VMP1-206ENST00000587945 H2AFJQ9BTM1 129 aa13.54□□□□□ -0.24
VMP1-206ENST00000587945 ARL15Q9NXU5 204 aa13.54□□□□□ -0.24
VMP1-206ENST00000587945 STMN3Q9NZ72 180 aa13.54□□□□□ -0.24
VMP1-206ENST00000587945 VWA7Q9Y334 891 aa13.54□□□□□ -0.24
VMP1-206ENST00000587945 NAALAD2Q9Y3Q0 740 aa13.54□□□□□ -0.24
VMP1-206ENST00000587945 MDC1Q14676 2089 aaKnown RBP13.53□□□□□ -0.24
VMP1-206ENST00000587945 USP27XA6NNY8 438 aa13.53□□□□□ -0.24
VMP1-206ENST00000587945 OR1F1O43749 312 aa13.53□□□□□ -0.24
VMP1-206ENST00000587945 SERPIND1P05546 499 aa13.53□□□□□ -0.24
VMP1-206ENST00000587945 CCND1P24385 295 aa13.53□□□□□ -0.24
VMP1-206ENST00000587945 CCR8P51685 355 aa13.53□□□□□ -0.24
VMP1-206ENST00000587945 TDGF1P3P51864 188 aa13.53□□□□□ -0.24
VMP1-206ENST00000587945 DUPD1Q68J44 220 aa13.53□□□□□ -0.24
VMP1-206ENST00000587945 TMEM207Q6UWW9 146 aa13.53□□□□□ -0.24
VMP1-206ENST00000587945 GALNT7Q86SF2 657 aa13.53□□□□□ -0.24
VMP1-206ENST00000587945 ANKMY2Q8IV38 441 aa13.53□□□□□ -0.24
VMP1-206ENST00000587945 PDIK1LQ8N165 341 aa13.53□□□□□ -0.24
VMP1-206ENST00000587945 ZNF740Q8NDX6 193 aa13.53□□□□□ -0.24
VMP1-206ENST00000587945 ABHD11Q8NFV4 315 aa13.53□□□□□ -0.24
VMP1-206ENST00000587945 OR56A3Q8NH54 315 aa13.53□□□□□ -0.24
VMP1-206ENST00000587945 NR4A3Q92570 626 aa13.53□□□□□ -0.24
VMP1-206ENST00000587945 TRIM51Q9BSJ1 452 aa13.53□□□□□ -0.24
VMP1-206ENST00000587945 HAUS8Q9BT25 410 aa13.53□□□□□ -0.24
VMP1-206ENST00000587945 SPNS1Q9H2V7 528 aa13.53□□□□□ -0.24
VMP1-206ENST00000587945 C19orf25Q9UFG5 118 aaPredicted RBP13.53□□□□□ -0.24
VMP1-206ENST00000587945 CTAGE15A4D2H0 777 aa13.52□□□□□ -0.25
VMP1-206ENST00000587945 OR5H15A6NDH6 313 aa13.52□□□□□ -0.25
VMP1-206ENST00000587945 PABPN1LA6NDY0 278 aaKnown RBP13.52□□□□□ -0.25
VMP1-206ENST00000587945 NDUFS4O43181 175 aa13.52□□□□□ -0.25
VMP1-206ENST00000587945 ZG16O60844 167 aa13.52□□□□□ -0.25
VMP1-206ENST00000587945 STSP08842 583 aa13.52□□□□□ -0.25
VMP1-206ENST00000587945 SLC35G6P0C7Q6 338 aa13.52□□□□□ -0.25
VMP1-206ENST00000587945 TCP1P17987 556 aaKnown RBP13.52□□□□□ -0.25
VMP1-206ENST00000587945 SAT1P21673 171 aa13.52□□□□□ -0.25
VMP1-206ENST00000587945 MST1P26927 711 aa13.52□□□□□ -0.25
VMP1-206ENST00000587945 OLR1P78380 273 aa13.52□□□□□ -0.25
VMP1-206ENST00000587945 PMP22Q01453 160 aa13.52□□□□□ -0.25
VMP1-206ENST00000587945 RHAGQ02094 409 aa13.52□□□□□ -0.25
VMP1-206ENST00000587945 MORF4L2Q15014 288 aa13.52□□□□□ -0.25
VMP1-206ENST00000587945 C1QL3Q5VWW1 255 aa13.52□□□□□ -0.25
VMP1-206ENST00000587945 STEAP4Q687X5 459 aa13.52□□□□□ -0.25
VMP1-206ENST00000587945 PLAG1Q6DJT9 500 aa13.52□□□□□ -0.25
VMP1-206ENST00000587945 FAM45BPQ6NSW5 357 aa13.52□□□□□ -0.25
VMP1-206ENST00000587945 CTAGE6Q86UF2 777 aa13.52□□□□□ -0.25
VMP1-206ENST00000587945 FJX1Q86VR8 437 aa13.52□□□□□ -0.25
VMP1-206ENST00000587945 OR4K1Q8NGD4 311 aa13.52□□□□□ -0.25
VMP1-206ENST00000587945 FAM45AQ8TCE6 357 aa13.52□□□□□ -0.25
VMP1-206ENST00000587945 TSLPQ969D9 159 aa13.52□□□□□ -0.25
VMP1-206ENST00000587945 FBXL8Q96CD0 374 aa13.52□□□□□ -0.25
VMP1-206ENST00000587945 TSNARE1Q96NA8 513 aa13.52□□□□□ -0.25
VMP1-206ENST00000587945 TRIM54Q9BYV2 358 aa13.52□□□□□ -0.25
VMP1-206ENST00000587945 TRIM31Q9BZY9 425 aa13.52□□□□□ -0.25
VMP1-206ENST00000587945 RNF32Q9H0A6 362 aa13.52□□□□□ -0.25
VMP1-206ENST00000587945 GRPEL1Q9HAV7 217 aa13.52□□□□□ -0.25
VMP1-206ENST00000587945 LANCL2Q9NS86 450 aa13.52□□□□□ -0.25
VMP1-206ENST00000587945 PSAT1Q9Y617 370 aa13.52□□□□□ -0.25
VMP1-206ENST00000587945 SLC22A7Q9Y694 548 aa13.52□□□□□ -0.25
VMP1-206ENST00000587945 TEX264Q9Y6I9 313 aa13.52□□□□□ -0.25
VMP1-206ENST00000587945 NUP210LQ5VU65 1888 aa13.52□□□□□ -0.25
VMP1-206ENST00000587945 TEX15Q9BXT5 2789 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms