RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 SYCE1Q8N0S2 351 aa11.18□□□□□ -0.62
BRCA1-225ENST00000586385 KIF2BQ8N4N8 673 aa11.18□□□□□ -0.62
BRCA1-225ENST00000586385 MARVELD2Q8N4S9 558 aa11.18□□□□□ -0.62
BRCA1-225ENST00000586385 OTUD6BQ8N6M0 293 aa11.18□□□□□ -0.62
BRCA1-225ENST00000586385 PRELID2Q8N945 189 aa11.18□□□□□ -0.62
BRCA1-225ENST00000586385 KCT2Q8NC54 265 aa11.18□□□□□ -0.62
BRCA1-225ENST00000586385 PHF10Q8WUB8 498 aaKnown RBP11.18□□□□□ -0.62
BRCA1-225ENST00000586385 TCF12Q99081 682 aa11.18□□□□□ -0.62
BRCA1-225ENST00000586385 UTP23Q9BRU9 249 aaKnown RBP11.18□□□□□ -0.62
BRCA1-225ENST00000586385 RBCK1Q9BYM8 510 aa11.18□□□□□ -0.62
BRCA1-225ENST00000586385 MCCC2Q9HCC0 563 aa11.18□□□□□ -0.62
BRCA1-225ENST00000586385 SOX13Q9UN79 622 aa11.18□□□□□ -0.62
BRCA1-225ENST00000586385 SCN2AQ99250 2005 aa11.18□□□□□ -0.62
BRCA1-225ENST00000586385 ZNF860A6NHJ4 632 aa11.17□□□□□ -0.62
BRCA1-225ENST00000586385 E9PLN8 166 aa11.17□□□□□ -0.62
BRCA1-225ENST00000586385 AVILO75366 819 aa11.17□□□□□ -0.62
BRCA1-225ENST00000586385 CDC123O75794 336 aaPredicted RBP11.17□□□□□ -0.62
BRCA1-225ENST00000586385 IPO7O95373 1038 aaKnown RBP11.17□□□□□ -0.62
BRCA1-225ENST00000586385 MYBL2P10244 700 aa11.17□□□□□ -0.62
BRCA1-225ENST00000586385 OGNP20774 298 aaKnown RBP11.17□□□□□ -0.62
BRCA1-225ENST00000586385 EEF1DP29692 281 aaKnown RBP11.17□□□□□ -0.62
BRCA1-225ENST00000586385 PTGER1P34995 402 aa11.17□□□□□ -0.62
BRCA1-225ENST00000586385 ZNF75DP51815 510 aa11.17□□□□□ -0.62
BRCA1-225ENST00000586385 NR0B1P51843 470 aaKnown RBP11.17□□□□□ -0.62
BRCA1-225ENST00000586385 SLC26A5P58743 744 aa11.17□□□□□ -0.62
BRCA1-225ENST00000586385 ABRAXAS2Q15018 415 aa11.17□□□□□ -0.62
BRCA1-225ENST00000586385 EXT1Q16394 746 aa11.17□□□□□ -0.62
BRCA1-225ENST00000586385 KRTAP21-3Q3LHN1 58 aa11.17□□□□□ -0.62
BRCA1-225ENST00000586385 RNF187Q5TA31 235 aaPredicted RBP11.17□□□□□ -0.62
BRCA1-225ENST00000586385 MFSD4BQ5TF39 518 aa11.17□□□□□ -0.62
BRCA1-225ENST00000586385 SLC25A25Q6KCM7 469 aa11.17□□□□□ -0.62
BRCA1-225ENST00000586385 MEX3BQ6ZN04 569 aaKnown RBP11.17□□□□□ -0.62
BRCA1-225ENST00000586385 CPSF7Q8N684 471 aaKnown RBP11.17□□□□□ -0.62
BRCA1-225ENST00000586385 CCDC89Q8N998 374 aa11.17□□□□□ -0.62
BRCA1-225ENST00000586385 PLPP5Q8NEB5 264 aa11.17□□□□□ -0.62
BRCA1-225ENST00000586385 OR5T3Q8NGG3 340 aa11.17□□□□□ -0.62
BRCA1-225ENST00000586385 ZCCHC10Q8TBK6 192 aa11.17□□□□□ -0.62
BRCA1-225ENST00000586385 ELP5Q8TE02 316 aa11.17□□□□□ -0.62
BRCA1-225ENST00000586385 VKORC1Q9BQB6 163 aa11.17□□□□□ -0.62
BRCA1-225ENST00000586385 GPAMQ9HCL2 828 aa11.17□□□□□ -0.62
BRCA1-225ENST00000586385 NPDC1Q9NQX5 325 aaPredicted RBP11.17□□□□□ -0.62
BRCA1-225ENST00000586385 TMEM184CQ9NVA4 438 aa11.17□□□□□ -0.62
BRCA1-225ENST00000586385 BFARQ9NZS9 450 aa11.17□□□□□ -0.62
BRCA1-225ENST00000586385 C19orf25Q9UFG5 118 aaPredicted RBP11.17□□□□□ -0.62
BRCA1-225ENST00000586385 NEU2Q9Y3R4 380 aa11.17□□□□□ -0.62
BRCA1-225ENST00000586385 SPG11Q96JI7 2443 aa11.17□□□□□ -0.62
BRCA1-225ENST00000586385 FEZF1A0PJY2 475 aa11.16□□□□□ -0.62
BRCA1-225ENST00000586385 NME2P1O60361 137 aa11.16□□□□□ -0.62
BRCA1-225ENST00000586385 SYF2O95926 243 aaKnown RBP11.16□□□□□ -0.62
BRCA1-225ENST00000586385 B3GALT4O96024 378 aa11.16□□□□□ -0.62
BRCA1-225ENST00000586385 MPC1LP0DKB6 136 aa11.16□□□□□ -0.62
BRCA1-225ENST00000586385 CD46P15529 392 aa11.16□□□□□ -0.62
BRCA1-225ENST00000586385 NME2P22392 152 aa11.16□□□□□ -0.62
BRCA1-225ENST00000586385 AGTR2P50052 363 aa11.16□□□□□ -0.62
BRCA1-225ENST00000586385 BASP1P80723 227 aaKnown RBP11.16□□□□□ -0.62
BRCA1-225ENST00000586385 TIAL1Q01085 375 aaKnown RBP eCLIP11.16□□□□□ -0.62
BRCA1-225ENST00000586385 TFF3Q07654 80 aa11.16□□□□□ -0.62
BRCA1-225ENST00000586385 RPS6KA1Q15418 735 aa11.16□□□□□ -0.62
BRCA1-225ENST00000586385 CCNG2Q16589 344 aa11.16□□□□□ -0.62
BRCA1-225ENST00000586385 SKOR2Q2VWA4 1001 aaPredicted RBP11.16□□□□□ -0.62
BRCA1-225ENST00000586385 NEPROQ6NW34 567 aa11.16□□□□□ -0.62
BRCA1-225ENST00000586385 DRICH1Q6PGQ1 229 aaPredicted RBP11.16□□□□□ -0.62
BRCA1-225ENST00000586385 MBOAT1Q6ZNC8 495 aa11.16□□□□□ -0.62
BRCA1-225ENST00000586385 PIWIL4Q7Z3Z4 852 aaKnown RBP11.16□□□□□ -0.62
BRCA1-225ENST00000586385 SDCCAG8Q86SQ7 713 aaPredicted RBP11.16□□□□□ -0.62
BRCA1-225ENST00000586385 DENND6AQ8IWF6 608 aa11.16□□□□□ -0.62
BRCA1-225ENST00000586385 GHDCQ8N2G8 530 aa11.16□□□□□ -0.62
BRCA1-225ENST00000586385 AFAP1L2Q8N4X5 818 aa11.16□□□□□ -0.62
BRCA1-225ENST00000586385 TMEM178AQ8NBL3 297 aa11.16□□□□□ -0.62
BRCA1-225ENST00000586385 CD200R1Q8TD46 325 aa11.16□□□□□ -0.62
BRCA1-225ENST00000586385 SDCCAG3Q96C92 435 aa11.16□□□□□ -0.62
BRCA1-225ENST00000586385 POM121Q96HA1 1249 aa11.16□□□□□ -0.62
BRCA1-225ENST00000586385 EBNA1BP2Q99848 306 aaKnown RBP11.16□□□□□ -0.62
BRCA1-225ENST00000586385 CDCP1Q9H5V8 836 aa11.16□□□□□ -0.62
BRCA1-225ENST00000586385 TRIM45Q9H8W5 580 aaPredicted RBP11.16□□□□□ -0.62
BRCA1-225ENST00000586385 UTP6Q9NYH9 597 aaKnown RBP11.16□□□□□ -0.62
BRCA1-225ENST00000586385 LRFN1Q9P244 771 aa11.16□□□□□ -0.62
BRCA1-225ENST00000586385 KLHL42Q9P2K6 505 aa11.16□□□□□ -0.62
BRCA1-225ENST00000586385 ITPR3Q14573 2671 aa11.15□□□□□ -0.62
BRCA1-225ENST00000586385 ZNF839A8K0R7 811 aa11.15□□□□□ -0.62
BRCA1-225ENST00000586385 MAGEB17A8MXT2 336 aa11.15□□□□□ -0.62
BRCA1-225ENST00000586385 KIF5CO60282 957 aa11.15□□□□□ -0.62
BRCA1-225ENST00000586385 SLC25A12O75746 678 aa11.15□□□□□ -0.62
BRCA1-225ENST00000586385 ABOP16442 354 aa11.15□□□□□ -0.62
BRCA1-225ENST00000586385 ZNF24P17028 368 aa11.15□□□□□ -0.62
BRCA1-225ENST00000586385 TPP2P29144 1249 aaPredicted RBP11.15□□□□□ -0.62
BRCA1-225ENST00000586385 KCNJ1P48048 391 aa11.15□□□□□ -0.62
BRCA1-225ENST00000586385 RPS15AP62244 130 aaKnown RBP11.15□□□□□ -0.62
BRCA1-225ENST00000586385 TBPL1P62380 186 aa11.15□□□□□ -0.62
BRCA1-225ENST00000586385 OC90Q02509 493 aaPredicted RBP11.15□□□□□ -0.62
BRCA1-225ENST00000586385 KIF5AQ12840 1032 aa11.15□□□□□ -0.62
BRCA1-225ENST00000586385 NSDHLQ15738 373 aa11.15□□□□□ -0.62
BRCA1-225ENST00000586385 SEL1L2Q5TEA6 688 aa11.15□□□□□ -0.62
BRCA1-225ENST00000586385 CAND1Q86VP6 1230 aaKnown RBP11.15□□□□□ -0.62
BRCA1-225ENST00000586385 SLC26A11Q86WA9 606 aa11.15□□□□□ -0.62
BRCA1-225ENST00000586385 RPS19BP1Q86WX3 136 aaKnown RBP11.15□□□□□ -0.62
BRCA1-225ENST00000586385 CPNE9Q8IYJ1 553 aa11.15□□□□□ -0.62
BRCA1-225ENST00000586385 LGI4Q8N135 537 aa11.15□□□□□ -0.62
BRCA1-225ENST00000586385 AGGF1Q8N302 714 aaeCLIP11.15□□□□□ -0.62
BRCA1-225ENST00000586385 RPRMLQ8N4K4 120 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms