RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 KCT2Q8NC54 265 aa13.63□□□□□ -0.23
SDF2-202ENST00000585428 MTFMTQ96DP5 389 aaKnown RBP13.63□□□□□ -0.23
SDF2-202ENST00000585428 UTP23Q9BRU9 249 aaKnown RBP13.63□□□□□ -0.23
SDF2-202ENST00000585428 HES7Q9BYE0 225 aa13.63□□□□□ -0.23
SDF2-202ENST00000585428 ANKRD10Q9NXR5 420 aa13.63□□□□□ -0.23
SDF2-202ENST00000585428 SLC22A7Q9Y694 548 aa13.63□□□□□ -0.23
SDF2-202ENST00000585428 CELSR1Q9NYQ6 3014 aa13.62□□□□□ -0.23
SDF2-202ENST00000585428 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.62□□□□□ -0.23
SDF2-202ENST00000585428 ZCWPW2A0A1B0GU75 182 aa13.62□□□□□ -0.23
SDF2-202ENST00000585428 FAM237BA0A1B0GVD1 139 aa13.62□□□□□ -0.23
SDF2-202ENST00000585428 NEURL1O76050 574 aa13.62□□□□□ -0.23
SDF2-202ENST00000585428 CLDN14O95500 239 aa13.62□□□□□ -0.23
SDF2-202ENST00000585428 SP1P08047 785 aa13.62□□□□□ -0.23
SDF2-202ENST00000585428 F7P08709 466 aaPredicted RBP13.62□□□□□ -0.23
SDF2-202ENST00000585428 IL1RNP18510 177 aa13.62□□□□□ -0.23
SDF2-202ENST00000585428 IL10P22301 178 aa13.62□□□□□ -0.23
SDF2-202ENST00000585428 EEF1DP29692 281 aaKnown RBP13.62□□□□□ -0.23
SDF2-202ENST00000585428 ST13P50502 369 aaKnown RBP13.62□□□□□ -0.23
SDF2-202ENST00000585428 SARNPP82979 210 aaKnown RBP13.62□□□□□ -0.23
SDF2-202ENST00000585428 ALDH6A1Q02252 535 aaKnown RBP13.62□□□□□ -0.23
SDF2-202ENST00000585428 DHX34Q14147 1143 aaKnown RBP13.62□□□□□ -0.23
SDF2-202ENST00000585428 NSDHLQ15738 373 aa13.62□□□□□ -0.23
SDF2-202ENST00000585428 MFSD4BQ5TF39 518 aa13.62□□□□□ -0.23
SDF2-202ENST00000585428 UBE2R2Q712K3 238 aaPredicted RBP13.62□□□□□ -0.23
SDF2-202ENST00000585428 DENND6AQ8IWF6 608 aa13.62□□□□□ -0.23
SDF2-202ENST00000585428 CHERPQ8IWX8 916 aaKnown RBP13.62□□□□□ -0.23
SDF2-202ENST00000585428 ACBD4Q8NC06 268 aa13.62□□□□□ -0.23
SDF2-202ENST00000585428 CAMKVQ8NCB2 501 aa13.62□□□□□ -0.23
SDF2-202ENST00000585428 CD200R1Q8TD46 325 aa13.62□□□□□ -0.23
SDF2-202ENST00000585428 FRMD6Q96NE9 622 aa13.62□□□□□ -0.23
SDF2-202ENST00000585428 TRIM51Q9BSJ1 452 aa13.62□□□□□ -0.23
SDF2-202ENST00000585428 FAM129AQ9BZQ8 928 aa13.62□□□□□ -0.23
SDF2-202ENST00000585428 KLHL1Q9NR64 748 aa13.62□□□□□ -0.23
SDF2-202ENST00000585428 LANCL2Q9NS86 450 aa13.62□□□□□ -0.23
SDF2-202ENST00000585428 HCN3Q9P1Z3 774 aa13.62□□□□□ -0.23
SDF2-202ENST00000585428 CTAGE9A4FU28 777 aa13.61□□□□□ -0.23
SDF2-202ENST00000585428 SDR42E2A6NKP2 422 aa13.61□□□□□ -0.23
SDF2-202ENST00000585428 MAGEB17A8MXT2 336 aa13.61□□□□□ -0.23
SDF2-202ENST00000585428 NPIPA5E9PKD4 350 aa13.61□□□□□ -0.23
SDF2-202ENST00000585428 FAM227AF5H4B4 570 aa13.61□□□□□ -0.23
SDF2-202ENST00000585428 HAUS5O94927 633 aa13.61□□□□□ -0.23
SDF2-202ENST00000585428 MLYCDO95822 493 aa13.61□□□□□ -0.23
SDF2-202ENST00000585428 FGGP02679 453 aa13.61□□□□□ -0.23
SDF2-202ENST00000585428 CD46P15529 392 aa13.61□□□□□ -0.23
SDF2-202ENST00000585428 NPPBP16860 134 aa13.61□□□□□ -0.23
SDF2-202ENST00000585428 SSTR2P30874 369 aa13.61□□□□□ -0.23
SDF2-202ENST00000585428 TIAL1Q01085 375 aaKnown RBP eCLIP13.61□□□□□ -0.23
SDF2-202ENST00000585428 ACTN3Q08043 901 aaPredicted RBP13.61□□□□□ -0.23
SDF2-202ENST00000585428 TESK1Q15569 626 aa13.61□□□□□ -0.23
SDF2-202ENST00000585428 SFT2D3Q587I9 215 aa13.61□□□□□ -0.23
SDF2-202ENST00000585428 ZNF470Q6ECI4 717 aa13.61□□□□□ -0.23
SDF2-202ENST00000585428 SLC25A25Q6KCM7 469 aa13.61□□□□□ -0.23
SDF2-202ENST00000585428 CAPN13Q6MZZ7 669 aaPredicted RBP13.61□□□□□ -0.23
SDF2-202ENST00000585428 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.61□□□□□ -0.23
SDF2-202ENST00000585428 SLC26A11Q86WA9 606 aa13.61□□□□□ -0.23
SDF2-202ENST00000585428 DOLPP1Q86YN1 238 aa13.61□□□□□ -0.23
SDF2-202ENST00000585428 LGI4Q8N135 537 aa13.61□□□□□ -0.23
SDF2-202ENST00000585428 ELP5Q8TE02 316 aa13.61□□□□□ -0.23
SDF2-202ENST00000585428 MAIP1Q8WWC4 291 aa13.61□□□□□ -0.23
SDF2-202ENST00000585428 SLC13A3Q8WWT9 602 aa13.61□□□□□ -0.23
SDF2-202ENST00000585428 C14orf79Q96F83 325 aa13.61□□□□□ -0.23
SDF2-202ENST00000585428 GPR21Q99679 349 aa13.61□□□□□ -0.23
SDF2-202ENST00000585428 SPOCK3Q9BQ16 436 aa13.61□□□□□ -0.23
SDF2-202ENST00000585428 SARGQ9BW04 601 aa13.61□□□□□ -0.23
SDF2-202ENST00000585428 PCBD2Q9H0N5 130 aa13.61□□□□□ -0.23
SDF2-202ENST00000585428 TRIM45Q9H8W5 580 aaPredicted RBP13.61□□□□□ -0.23
SDF2-202ENST00000585428 ANKHQ9HCJ1 492 aa13.61□□□□□ -0.23
SDF2-202ENST00000585428 GPAMQ9HCL2 828 aa13.61□□□□□ -0.23
SDF2-202ENST00000585428 CCDC177Q9NQR7 707 aaPredicted RBP13.61□□□□□ -0.23
SDF2-202ENST00000585428 FBXO6Q9NRD1 293 aaPredicted RBP13.61□□□□□ -0.23
SDF2-202ENST00000585428 HOMER3Q9NSC5 361 aa13.61□□□□□ -0.23
SDF2-202ENST00000585428 NPIPA1Q9UND3 350 aa13.61□□□□□ -0.23
SDF2-202ENST00000585428 SH2B3Q9UQQ2 575 aa13.61□□□□□ -0.23
SDF2-202ENST00000585428 COMMD10Q9Y6G5 202 aa13.61□□□□□ -0.23
SDF2-202ENST00000585428 CPAMD8Q8IZJ3 1885 aa13.61□□□□□ -0.23
SDF2-202ENST00000585428 FEZF1A0PJY2 475 aa13.6□□□□□ -0.23
SDF2-202ENST00000585428 GABRR3A8MPY1 467 aa13.6□□□□□ -0.23
SDF2-202ENST00000585428 EIF3FO00303 357 aaPredicted RBP13.6□□□□□ -0.23
SDF2-202ENST00000585428 ADAM10O14672 748 aa13.6□□□□□ -0.23
SDF2-202ENST00000585428 DNAJB6O75190 326 aa13.6□□□□□ -0.23
SDF2-202ENST00000585428 MLNP12872 115 aa13.6□□□□□ -0.23
SDF2-202ENST00000585428 CAPN3P20807 821 aa13.6□□□□□ -0.23
SDF2-202ENST00000585428 COILP38432 576 aaPredicted RBP13.6□□□□□ -0.23
SDF2-202ENST00000585428 KRTAP10-9P60411 292 aa13.6□□□□□ -0.23
SDF2-202ENST00000585428 MPP1Q00013 466 aa13.6□□□□□ -0.23
SDF2-202ENST00000585428 USP10Q14694 798 aaKnown RBP13.6□□□□□ -0.23
SDF2-202ENST00000585428 ABRAXAS2Q15018 415 aa13.6□□□□□ -0.23
SDF2-202ENST00000585428 TRIP13Q15645 432 aaPredicted RBP13.6□□□□□ -0.23
SDF2-202ENST00000585428 RNFT1Q5M7Z0 435 aa13.6□□□□□ -0.23
SDF2-202ENST00000585428 ZNF468Q5VIY5 522 aaPredicted RBP13.6□□□□□ -0.23
SDF2-202ENST00000585428 ANKRD22Q5VYY1 191 aa13.6□□□□□ -0.23
SDF2-202ENST00000585428 CASC4Q6P4E1 433 aa13.6□□□□□ -0.23
SDF2-202ENST00000585428 PAPD4Q6PIY7 484 aaKnown RBP13.6□□□□□ -0.23
SDF2-202ENST00000585428 PIWIL4Q7Z3Z4 852 aaKnown RBP13.6□□□□□ -0.23
SDF2-202ENST00000585428 GALNTL5Q7Z4T8 443 aa13.6□□□□□ -0.23
SDF2-202ENST00000585428 ZNF227Q86WZ6 799 aa13.6□□□□□ -0.23
SDF2-202ENST00000585428 CPNE9Q8IYJ1 553 aa13.6□□□□□ -0.23
SDF2-202ENST00000585428 AFAP1L2Q8N4X5 818 aa13.6□□□□□ -0.23
SDF2-202ENST00000585428 SLC5A8Q8N695 610 aa13.6□□□□□ -0.23
SDF2-202ENST00000585428 HORMAD2Q8N7B1 307 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms