RNA–Protein interactions for RNA: ENST00000584760.1

SREBF1-223, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-223ENST00000584760 UNKQ9C0B0 810 aaKnown RBP12.63□□□□□ -0.39
SREBF1-223ENST00000584760 SPNS1Q9H2V7 528 aa12.63□□□□□ -0.39
SREBF1-223ENST00000584760 SEMA3GQ9NS98 782 aa12.63□□□□□ -0.39
SREBF1-223ENST00000584760 LUZP4Q9P127 313 aa12.63□□□□□ -0.39
SREBF1-223ENST00000584760 MAP10Q9P2G4 905 aa12.63□□□□□ -0.39
SREBF1-223ENST00000584760 TRPC4Q9UBN4 977 aa12.63□□□□□ -0.39
SREBF1-223ENST00000584760 PCDHGB7Q9Y5F8 929 aa12.63□□□□□ -0.39
SREBF1-223ENST00000584760 CREBBPQ92793 2442 aa12.63□□□□□ -0.39
SREBF1-223ENST00000584760 TRBC2A0A5B9 178 aa12.62□□□□□ -0.39
SREBF1-223ENST00000584760 A6NL46 340 aa12.62□□□□□ -0.39
SREBF1-223ENST00000584760 TCP11X1B4DZS4 312 aa12.62□□□□□ -0.39
SREBF1-223ENST00000584760 ALOX12BO75342 701 aa12.62□□□□□ -0.39
SREBF1-223ENST00000584760 NSA2O95478 260 aaKnown RBP12.62□□□□□ -0.39
SREBF1-223ENST00000584760 DDAH2O95865 285 aa12.62□□□□□ -0.39
SREBF1-223ENST00000584760 CCDC166P0CW27 439 aa12.62□□□□□ -0.39
SREBF1-223ENST00000584760 CD1DP15813 335 aa12.62□□□□□ -0.39
SREBF1-223ENST00000584760 ECHS1P30084 290 aa12.62□□□□□ -0.39
SREBF1-223ENST00000584760 SPRP35270 261 aaPredicted RBP12.62□□□□□ -0.39
SREBF1-223ENST00000584760 GRK3P35626 688 aa12.62□□□□□ -0.39
SREBF1-223ENST00000584760 SOX8P57073 446 aa12.62□□□□□ -0.39
SREBF1-223ENST00000584760 RAB10P61026 200 aa12.62□□□□□ -0.39
SREBF1-223ENST00000584760 REEP5Q00765 189 aa12.62□□□□□ -0.39
SREBF1-223ENST00000584760 MEF2AQ02078 507 aaPredicted RBP12.62□□□□□ -0.39
SREBF1-223ENST00000584760 MRPL49Q13405 166 aaKnown RBP12.62□□□□□ -0.39
SREBF1-223ENST00000584760 RAPSNQ13702 412 aa12.62□□□□□ -0.39
SREBF1-223ENST00000584760 MYBPC3Q14896 1274 aa12.62□□□□□ -0.39
SREBF1-223ENST00000584760 TGFBIQ15582 683 aa12.62□□□□□ -0.39
SREBF1-223ENST00000584760 OR4D1Q15615 310 aa12.62□□□□□ -0.39
SREBF1-223ENST00000584760 INPP5JQ15735 1006 aaPredicted RBP12.62□□□□□ -0.39
SREBF1-223ENST00000584760 RBBP7Q16576 425 aa12.62□□□□□ -0.39
SREBF1-223ENST00000584760 NDUFA9Q16795 377 aa12.62□□□□□ -0.39
SREBF1-223ENST00000584760 SYT16Q17RD7 645 aa12.62□□□□□ -0.39
SREBF1-223ENST00000584760 PRR30Q53SZ7 412 aaPredicted RBP12.62□□□□□ -0.39
SREBF1-223ENST00000584760 CATSPEREQ5SY80 951 aa12.62□□□□□ -0.39
SREBF1-223ENST00000584760 UBAP2Q5T6F2 1119 aaKnown RBP12.62□□□□□ -0.39
SREBF1-223ENST00000584760 VWA5B1Q5TIE3 1220 aa12.62□□□□□ -0.39
SREBF1-223ENST00000584760 FRA10AC1Q70Z53 315 aa12.62□□□□□ -0.39
SREBF1-223ENST00000584760 TMPRSS11BQ86T26 416 aa12.62□□□□□ -0.39
SREBF1-223ENST00000584760 LAPTM4BQ86VI4 370 aa12.62□□□□□ -0.39
SREBF1-223ENST00000584760 THOC6Q86W42 341 aaKnown RBP12.62□□□□□ -0.39
SREBF1-223ENST00000584760 RELL1Q8IUW5 271 aa12.62□□□□□ -0.39
SREBF1-223ENST00000584760 ZC3H7AQ8IWR0 971 aaKnown RBP12.62□□□□□ -0.39
SREBF1-223ENST00000584760 PRSS58Q8IYP2 241 aa12.62□□□□□ -0.39
SREBF1-223ENST00000584760 GALNT16Q8N428 558 aa12.62□□□□□ -0.39
SREBF1-223ENST00000584760 SPATA6LQ8N4H0 392 aa12.62□□□□□ -0.39
SREBF1-223ENST00000584760 KCT2Q8NC54 265 aa12.62□□□□□ -0.39
SREBF1-223ENST00000584760 CAMKVQ8NCB2 501 aa12.62□□□□□ -0.39
SREBF1-223ENST00000584760 ZNF740Q8NDX6 193 aa12.62□□□□□ -0.39
SREBF1-223ENST00000584760 MNS1Q8NEH6 495 aa12.62□□□□□ -0.39
SREBF1-223ENST00000584760 OR11G2Q8NGC1 345 aa12.62□□□□□ -0.39
SREBF1-223ENST00000584760 OR9A4Q8NGU2 314 aa12.62□□□□□ -0.39
SREBF1-223ENST00000584760 EGFL8Q99944 293 aa12.62□□□□□ -0.39
SREBF1-223ENST00000584760 TGIF2Q9GZN2 237 aa12.62□□□□□ -0.39
SREBF1-223ENST00000584760 MKKSQ9NPJ1 570 aaPredicted RBP12.62□□□□□ -0.39
SREBF1-223ENST00000584760 C14orf105Q9NVL8 296 aa12.62□□□□□ -0.39
SREBF1-223ENST00000584760 C3orf18Q9UK00 162 aa12.62□□□□□ -0.39
SREBF1-223ENST00000584760 G3BP2Q9UN86 482 aaKnown RBP12.62□□□□□ -0.39
SREBF1-223ENST00000584760 SLC22A14Q9Y267 594 aa12.62□□□□□ -0.39
SREBF1-223ENST00000584760 ZNF451Q9Y4E5 1061 aa12.62□□□□□ -0.39
SREBF1-223ENST00000584760 SCN2AQ99250 2005 aa12.61□□□□□ -0.39
SREBF1-223ENST00000584760 A0A1W2PQ72 361 aa12.61□□□□□ -0.39
SREBF1-223ENST00000584760 CTAGE15A4D2H0 777 aa12.61□□□□□ -0.39
SREBF1-223ENST00000584760 H0YIG0 161 aa12.61□□□□□ -0.39
SREBF1-223ENST00000584760 SORBS2O94875 1100 aaKnown RBP12.61□□□□□ -0.39
SREBF1-223ENST00000584760 SLC35G6P0C7Q6 338 aa12.61□□□□□ -0.39
SREBF1-223ENST00000584760 CTAGE8P0CG41 777 aa12.61□□□□□ -0.39
SREBF1-223ENST00000584760 SLC35E2BP0CK96 405 aa12.61□□□□□ -0.39
SREBF1-223ENST00000584760 IL1RNP18510 177 aa12.61□□□□□ -0.39
SREBF1-223ENST00000584760 GMPRP36959 345 aa12.61□□□□□ -0.39
SREBF1-223ENST00000584760 DCTP40126 519 aa12.61□□□□□ -0.39
SREBF1-223ENST00000584760 SCTRP47872 440 aa12.61□□□□□ -0.39
SREBF1-223ENST00000584760 EFNA3P52797 238 aa12.61□□□□□ -0.39
SREBF1-223ENST00000584760 ATP6V0D1P61421 351 aa12.61□□□□□ -0.39
SREBF1-223ENST00000584760 MAT1AQ00266 395 aaKnown RBP12.61□□□□□ -0.39
SREBF1-223ENST00000584760 AIMP2Q13155 320 aaKnown RBP12.61□□□□□ -0.39
SREBF1-223ENST00000584760 CSHL1Q14406 222 aa12.61□□□□□ -0.39
SREBF1-223ENST00000584760 SLMAPQ14BN4 828 aa12.61□□□□□ -0.39
SREBF1-223ENST00000584760 C18orf21Q32NC0 220 aaPredicted RBP12.61□□□□□ -0.39
SREBF1-223ENST00000584760 TUBB8Q3ZCM7 444 aa12.61□□□□□ -0.39
SREBF1-223ENST00000584760 MAMDC2Q7Z304 686 aaPredicted RBP12.61□□□□□ -0.39
SREBF1-223ENST00000584760 CMC1Q7Z7K0 106 aa12.61□□□□□ -0.39
SREBF1-223ENST00000584760 CTAGE6Q86UF2 777 aa12.61□□□□□ -0.39
SREBF1-223ENST00000584760 PDSS2Q86YH6 399 aa12.61□□□□□ -0.39
SREBF1-223ENST00000584760 CTAGE4Q8IX94 777 aa12.61□□□□□ -0.39
SREBF1-223ENST00000584760 SHISA5Q8N114 240 aa12.61□□□□□ -0.39
SREBF1-223ENST00000584760 ZCCHC10Q8TBK6 192 aa12.61□□□□□ -0.39
SREBF1-223ENST00000584760 MOCOSQ96EN8 888 aa12.61□□□□□ -0.39
SREBF1-223ENST00000584760 TMEM79Q9BSE2 394 aa12.61□□□□□ -0.39
SREBF1-223ENST00000584760 MFRPQ9BY79 579 aa12.61□□□□□ -0.39
SREBF1-223ENST00000584760 PELI2Q9HAT8 420 aa12.61□□□□□ -0.39
SREBF1-223ENST00000584760 NINJ2Q9NZG7 142 aa12.61□□□□□ -0.39
SREBF1-223ENST00000584760 MTRF1LQ9UGC7 380 aaKnown RBP12.61□□□□□ -0.39
SREBF1-223ENST00000584760 SHANK1Q9Y566 2161 aa12.61□□□□□ -0.39
SREBF1-223ENST00000584760 HMX2A2RU54 273 aa12.6□□□□□ -0.39
SREBF1-223ENST00000584760 IDSB3KWA1 339 aa12.6□□□□□ -0.39
SREBF1-223ENST00000584760 NDUFS4O43181 175 aa12.6□□□□□ -0.39
SREBF1-223ENST00000584760 OR1F1O43749 312 aa12.6□□□□□ -0.39
SREBF1-223ENST00000584760 WDR47O94967 919 aa12.6□□□□□ -0.39
SREBF1-223ENST00000584760 CLDN1O95832 211 aa12.6□□□□□ -0.39
SREBF1-223ENST00000584760 ACPPP15309 386 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms