RNA–Protein interactions for RNA: ENST00000583344.1

SMCHD1-208, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 738 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-208ENST00000583344 GNAZP19086 355 aa3.77□□□□□ -1.81
SMCHD1-208ENST00000583344 POLR2CP19387 275 aaPredicted RBP3.77□□□□□ -1.81
SMCHD1-208ENST00000583344 CHRNB4P30926 498 aa3.77□□□□□ -1.81
SMCHD1-208ENST00000583344 MAPK4P31152 587 aa3.77□□□□□ -1.81
SMCHD1-208ENST00000583344 NNMTP40261 264 aa3.77□□□□□ -1.81
SMCHD1-208ENST00000583344 MSH2P43246 934 aa3.77□□□□□ -1.81
SMCHD1-208ENST00000583344 BTDP43251 543 aa3.77□□□□□ -1.81
SMCHD1-208ENST00000583344 DNA2P51530 1060 aa3.77□□□□□ -1.81
SMCHD1-208ENST00000583344 CDH15P55291 814 aa3.77□□□□□ -1.81
SMCHD1-208ENST00000583344 RPS3AP61247 264 aaKnown RBP3.77□□□□□ -1.81
SMCHD1-208ENST00000583344 EEF1A1P68104 462 aaKnown RBP3.77□□□□□ -1.81
SMCHD1-208ENST00000583344 RPL24P83731 157 aaKnown RBP3.77□□□□□ -1.81
SMCHD1-208ENST00000583344 ENPEPQ07075 957 aa3.77□□□□□ -1.81
SMCHD1-208ENST00000583344 PTP4A2Q12974 167 aa3.77□□□□□ -1.81
SMCHD1-208ENST00000583344 PRPF4BQ13523 1007 aaKnown RBP3.77□□□□□ -1.81
SMCHD1-208ENST00000583344 DCTN2Q13561 401 aaKnown RBP3.77□□□□□ -1.81
SMCHD1-208ENST00000583344 GRAPQ13588 217 aa3.77□□□□□ -1.81
SMCHD1-208ENST00000583344 E2F5Q15329 346 aa3.77□□□□□ -1.81
SMCHD1-208ENST00000583344 SLC1A5Q15758 541 aa3.77□□□□□ -1.81
SMCHD1-208ENST00000583344 UBE2SQ16763 222 aa3.77□□□□□ -1.81
SMCHD1-208ENST00000583344 EEF1A1P5Q5VTE0 462 aa3.77□□□□□ -1.81
SMCHD1-208ENST00000583344 TTC27Q6P3X3 843 aa3.77□□□□□ -1.81
SMCHD1-208ENST00000583344 CCDC137Q6PK04 289 aaKnown RBP3.77□□□□□ -1.81
SMCHD1-208ENST00000583344 FAM47EQ6ZV65 393 aa3.77□□□□□ -1.81
SMCHD1-208ENST00000583344 STXBP4Q6ZWJ1 553 aa3.77□□□□□ -1.81
SMCHD1-208ENST00000583344 BZW1Q7L1Q6 419 aaKnown RBP3.77□□□□□ -1.81
SMCHD1-208ENST00000583344 SZRD1Q7Z422 152 aa3.77□□□□□ -1.81
SMCHD1-208ENST00000583344 GALNTL5Q7Z4T8 443 aa3.77□□□□□ -1.81
SMCHD1-208ENST00000583344 HAPLN4Q86UW8 402 aa3.77□□□□□ -1.81
SMCHD1-208ENST00000583344 SLC13A5Q86YT5 568 aaPredicted RBP3.77□□□□□ -1.81
SMCHD1-208ENST00000583344 RIBC1Q8N443 379 aaPredicted RBP3.77□□□□□ -1.81
SMCHD1-208ENST00000583344 BBOF1Q8ND07 529 aa3.77□□□□□ -1.81
SMCHD1-208ENST00000583344 ACVR1CQ8NER5 493 aa3.77□□□□□ -1.81
SMCHD1-208ENST00000583344 OR5R1Q8NH85 324 aa3.77□□□□□ -1.81
SMCHD1-208ENST00000583344 NFKBIDQ8NI38 313 aa3.77□□□□□ -1.81
SMCHD1-208ENST00000583344 METTL6Q8TCB7 284 aa3.77□□□□□ -1.81
SMCHD1-208ENST00000583344 KLHL29Q96CT2 875 aa3.77□□□□□ -1.81
SMCHD1-208ENST00000583344 ARHGEF26Q96DR7 871 aa3.77□□□□□ -1.81
SMCHD1-208ENST00000583344 STAMBPL1Q96FJ0 436 aa3.77□□□□□ -1.81
SMCHD1-208ENST00000583344 LRR1Q96L50 414 aa3.77□□□□□ -1.81
SMCHD1-208ENST00000583344 FAM81BQ96LP2 452 aa3.77□□□□□ -1.81
SMCHD1-208ENST00000583344 RAB3IPQ96QF0 476 aaPredicted RBP3.77□□□□□ -1.81
SMCHD1-208ENST00000583344 TRIM51Q9BSJ1 452 aa3.77□□□□□ -1.81
SMCHD1-208ENST00000583344 ITPAQ9BY32 194 aa3.77□□□□□ -1.81
SMCHD1-208ENST00000583344 GLIS2Q9BZE0 524 aaPredicted RBP3.77□□□□□ -1.81
SMCHD1-208ENST00000583344 TRIM7Q9C029 511 aa3.77□□□□□ -1.81
SMCHD1-208ENST00000583344 INTS2Q9H0H0 1204 aaKnown RBP3.77□□□□□ -1.81
SMCHD1-208ENST00000583344 THAP2Q9H0W7 228 aa3.77□□□□□ -1.81
SMCHD1-208ENST00000583344 GOLPH3Q9H4A6 298 aa3.77□□□□□ -1.81
SMCHD1-208ENST00000583344 AZI2Q9H6S1 392 aa3.77□□□□□ -1.81
SMCHD1-208ENST00000583344 TLE6Q9H808 572 aa3.77□□□□□ -1.81
SMCHD1-208ENST00000583344 ECT2Q9H8V3 914 aa3.77□□□□□ -1.81
SMCHD1-208ENST00000583344 SEBOXQ9HB31 216 aaPredicted RBP3.77□□□□□ -1.81
SMCHD1-208ENST00000583344 POLD4Q9HCU8 107 aa3.77□□□□□ -1.81
SMCHD1-208ENST00000583344 EURLQ9NYK6 297 aa3.77□□□□□ -1.81
SMCHD1-208ENST00000583344 GCNT4Q9P109 453 aa3.77□□□□□ -1.81
SMCHD1-208ENST00000583344 UVRAGQ9P2Y5 699 aa3.77□□□□□ -1.81
SMCHD1-208ENST00000583344 ACSL5Q9ULC5 683 aa3.77□□□□□ -1.81
SMCHD1-208ENST00000583344 ERVK-11Q9UQG0 969 aa3.77□□□□□ -1.81
SMCHD1-208ENST00000583344 SNX5Q9Y5X3 404 aa3.77□□□□□ -1.81
SMCHD1-208ENST00000583344 COL5A3P25940 1745 aaPredicted RBP3.77□□□□□ -1.81
SMCHD1-208ENST00000583344 DDX60LQ5H9U9 1706 aaKnown RBP3.77□□□□□ -1.81
SMCHD1-208ENST00000583344 PASKQ96RG2 1323 aa3.76□□□□□ -1.81
SMCHD1-208ENST00000583344 IGSF9BQ9UPX0 1349 aa3.76□□□□□ -1.81
SMCHD1-208ENST00000583344 MYH4Q9Y623 1939 aa3.76□□□□□ -1.81
SMCHD1-208ENST00000583344 NAV1Q8NEY1 1877 aa3.76□□□□□ -1.81
SMCHD1-208ENST00000583344 TCP11X1B4DZS4 312 aa3.76□□□□□ -1.81
SMCHD1-208ENST00000583344 CLIC2O15247 247 aa3.76□□□□□ -1.81
SMCHD1-208ENST00000583344 MSH4O15457 936 aa3.76□□□□□ -1.81
SMCHD1-208ENST00000583344 PRKNO60260 465 aaPredicted RBP3.76□□□□□ -1.81
SMCHD1-208ENST00000583344 ECE2O60344 883 aa3.76□□□□□ -1.81
SMCHD1-208ENST00000583344 PSMD10O75832 226 aa3.76□□□□□ -1.81
SMCHD1-208ENST00000583344 BEST1O76090 585 aa3.76□□□□□ -1.81
SMCHD1-208ENST00000583344 LUC7L3O95232 432 aaKnown RBP3.76□□□□□ -1.81
SMCHD1-208ENST00000583344 EGFP01133 1207 aa3.76□□□□□ -1.81
SMCHD1-208ENST00000583344 KRT16P08779 473 aa3.76□□□□□ -1.81
SMCHD1-208ENST00000583344 RPSAP08865 295 aaKnown RBP3.76□□□□□ -1.81
SMCHD1-208ENST00000583344 ABHD2P08910 425 aa3.76□□□□□ -1.81
SMCHD1-208ENST00000583344 TAC1P20366 129 aa3.76□□□□□ -1.81
SMCHD1-208ENST00000583344 IL11P20809 199 aa3.76□□□□□ -1.81
SMCHD1-208ENST00000583344 CALB2P22676 271 aa3.76□□□□□ -1.81
SMCHD1-208ENST00000583344 RWDD2BP57060 319 aa3.76□□□□□ -1.81
SMCHD1-208ENST00000583344 TAS2R38P59533 333 aa3.76□□□□□ -1.81
SMCHD1-208ENST00000583344 KCNJ2P63252 427 aa3.76□□□□□ -1.81
SMCHD1-208ENST00000583344 MAP2K1Q02750 393 aaPredicted RBP3.76□□□□□ -1.81
SMCHD1-208ENST00000583344 CETN1Q12798 172 aa3.76□□□□□ -1.81
SMCHD1-208ENST00000583344 GAGE5Q13069 117 aa3.76□□□□□ -1.81
SMCHD1-208ENST00000583344 GAGE6Q13070 117 aa3.76□□□□□ -1.81
SMCHD1-208ENST00000583344 PPP2R5CQ13362 524 aa3.76□□□□□ -1.81
SMCHD1-208ENST00000583344 ALCAMQ13740 583 aa3.76□□□□□ -1.81
SMCHD1-208ENST00000583344 CAMK1Q14012 370 aa3.76□□□□□ -1.81
SMCHD1-208ENST00000583344 SGSM1Q2NKQ1 1148 aa3.76□□□□□ -1.81
SMCHD1-208ENST00000583344 EPC2Q52LR7 807 aa3.76□□□□□ -1.81
SMCHD1-208ENST00000583344 TMEM35AQ53FP2 167 aa3.76□□□□□ -1.81
SMCHD1-208ENST00000583344 BRAT1Q6PJG6 821 aa3.76□□□□□ -1.81
SMCHD1-208ENST00000583344 PPP1R21Q6ZMI0 780 aa3.76□□□□□ -1.81
SMCHD1-208ENST00000583344 IKBIPQ70UQ0 350 aa3.76□□□□□ -1.81
SMCHD1-208ENST00000583344 INTS8Q75QN2 995 aaKnown RBP3.76□□□□□ -1.81
SMCHD1-208ENST00000583344 SPATA21Q7Z572 469 aa3.76□□□□□ -1.81
SMCHD1-208ENST00000583344 PRPF39Q86UA1 669 aaKnown RBP3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms