RNA–Protein interactions for RNA: ENST00000582308.1

RFFL-210, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-210ENST00000582308 TBC1D19Q8N5T2 526 aa9.11□□□□□ -0.95
RFFL-210ENST00000582308 PIWIL2Q8TC59 973 aaKnown RBP9.11□□□□□ -0.95
RFFL-210ENST00000582308 CREB3L4Q8TEY5 395 aa9.11□□□□□ -0.95
RFFL-210ENST00000582308 ZNF473Q8WTR7 871 aaKnown RBP9.11□□□□□ -0.95
RFFL-210ENST00000582308 TWIST2Q8WVJ9 160 aa9.11□□□□□ -0.95
RFFL-210ENST00000582308 SELENOMQ8WWX9 145 aa9.11□□□□□ -0.95
RFFL-210ENST00000582308 REPS1Q96D71 796 aa9.11□□□□□ -0.95
RFFL-210ENST00000582308 TM4SF19Q96DZ7 209 aa9.11□□□□□ -0.95
RFFL-210ENST00000582308 THAP11Q96EK4 314 aa9.11□□□□□ -0.95
RFFL-210ENST00000582308 C3orf30Q96M34 536 aa9.11□□□□□ -0.95
RFFL-210ENST00000582308 ZNF285Q96NJ3 590 aa9.11□□□□□ -0.95
RFFL-210ENST00000582308 HBEGFQ99075 208 aa9.11□□□□□ -0.95
RFFL-210ENST00000582308 MACROD1Q9BQ69 325 aa9.11□□□□□ -0.95
RFFL-210ENST00000582308 AICDAQ9GZX7 198 aa9.11□□□□□ -0.95
RFFL-210ENST00000582308 ELOVL6Q9H5J4 265 aa9.11□□□□□ -0.95
RFFL-210ENST00000582308 DMRT3Q9NQL9 472 aa9.11□□□□□ -0.95
RFFL-210ENST00000582308 SIDT1Q9NXL6 827 aaKnown RBP9.11□□□□□ -0.95
RFFL-210ENST00000582308 ZFP69BQ9UJL9 534 aa9.11□□□□□ -0.95
RFFL-210ENST00000582308 PLCL2Q9UPR0 1127 aa9.11□□□□□ -0.95
RFFL-210ENST00000582308 DCHS1Q96JQ0 3298 aa9.1□□□□□ -0.95
RFFL-210ENST00000582308 SERTM1A2A2V5 107 aa9.1□□□□□ -0.95
RFFL-210ENST00000582308 DCDC2BA2VCK2 349 aa9.1□□□□□ -0.95
RFFL-210ENST00000582308 GMNCA6NCL1 334 aa9.1□□□□□ -0.95
RFFL-210ENST00000582308 ANKDD1BA6NHY2 528 aa9.1□□□□□ -0.95
RFFL-210ENST00000582308 H3BMH7 237 aa9.1□□□□□ -0.95
RFFL-210ENST00000582308 FOXE1O00358 373 aaPredicted RBP9.1□□□□□ -0.95
RFFL-210ENST00000582308 PIP5K1BO14986 540 aa9.1□□□□□ -0.95
RFFL-210ENST00000582308 HDAC3O15379 428 aa9.1□□□□□ -0.95
RFFL-210ENST00000582308 MAP3K7O43318 606 aa9.1□□□□□ -0.95
RFFL-210ENST00000582308 SRPX2O60687 465 aaPredicted RBP9.1□□□□□ -0.95
RFFL-210ENST00000582308 SHOX2O60902 331 aaPredicted RBP9.1□□□□□ -0.95
RFFL-210ENST00000582308 SH3BGRLO75368 114 aa9.1□□□□□ -0.95
RFFL-210ENST00000582308 SKAP2O75563 359 aaPredicted RBP9.1□□□□□ -0.95
RFFL-210ENST00000582308 CLEC3AO75596 197 aa9.1□□□□□ -0.95
RFFL-210ENST00000582308 ETHE1O95571 254 aa9.1□□□□□ -0.95
RFFL-210ENST00000582308 TGFB1P01137 390 aa9.1□□□□□ -0.95
RFFL-210ENST00000582308 SERPIND1P05546 499 aa9.1□□□□□ -0.95
RFFL-210ENST00000582308 LINC00032P0C843 101 aa9.1□□□□□ -0.95
RFFL-210ENST00000582308 DRD4P21917 467 aa9.1□□□□□ -0.95
RFFL-210ENST00000582308 GSTM2P28161 218 aa9.1□□□□□ -0.95
RFFL-210ENST00000582308 CSTF2P33240 577 aaKnown RBP eCLIP9.1□□□□□ -0.95
RFFL-210ENST00000582308 VSX2P58304 361 aaPredicted RBP9.1□□□□□ -0.95
RFFL-210ENST00000582308 RPS13P62277 151 aaKnown RBP9.1□□□□□ -0.95
RFFL-210ENST00000582308 BTKQ06187 659 aa9.1□□□□□ -0.95
RFFL-210ENST00000582308 ZNF33BQ06732 778 aa9.1□□□□□ -0.95
RFFL-210ENST00000582308 HYAL2Q12891 473 aa9.1□□□□□ -0.95
RFFL-210ENST00000582308 PDCD2Q16342 344 aaPredicted RBP9.1□□□□□ -0.95
RFFL-210ENST00000582308 PRTGQ2VWP7 1150 aa9.1□□□□□ -0.95
RFFL-210ENST00000582308 WASHC2DQ5SRD0 308 aa9.1□□□□□ -0.95
RFFL-210ENST00000582308 TMTC4Q5T4D3 741 aa9.1□□□□□ -0.95
RFFL-210ENST00000582308 C10orf62Q5T681 223 aaPredicted RBP9.1□□□□□ -0.95
RFFL-210ENST00000582308 VWA5B1Q5TIE3 1220 aa9.1□□□□□ -0.95
RFFL-210ENST00000582308 RNF165Q6ZSG1 346 aa9.1□□□□□ -0.95
RFFL-210ENST00000582308 DGLUCYQ7Z3D6 616 aa9.1□□□□□ -0.95
RFFL-210ENST00000582308 MAVSQ7Z434 540 aa9.1□□□□□ -0.95
RFFL-210ENST00000582308 TRIM46Q7Z4K8 759 aa9.1□□□□□ -0.95
RFFL-210ENST00000582308 ASPGQ86U10 573 aa9.1□□□□□ -0.95
RFFL-210ENST00000582308 KIRREL3Q8IZU9 778 aa9.1□□□□□ -0.95
RFFL-210ENST00000582308 CHCHD4Q8N4Q1 142 aa9.1□□□□□ -0.95
RFFL-210ENST00000582308 BMPERQ8N8U9 685 aa9.1□□□□□ -0.95
RFFL-210ENST00000582308 AGBL5Q8NDL9 886 aa9.1□□□□□ -0.95
RFFL-210ENST00000582308 TRPV3Q8NET8 790 aa9.1□□□□□ -0.95
RFFL-210ENST00000582308 TTLQ8NG68 377 aa9.1□□□□□ -0.95
RFFL-210ENST00000582308 NT5CQ8TCD5 201 aa9.1□□□□□ -0.95
RFFL-210ENST00000582308 SLC13A3Q8WWT9 602 aa9.1□□□□□ -0.95
RFFL-210ENST00000582308 THOC1Q96FV9 657 aaKnown RBP9.1□□□□□ -0.95
RFFL-210ENST00000582308 CHMP6Q96FZ7 201 aa9.1□□□□□ -0.95
RFFL-210ENST00000582308 SEC16BQ96JE7 1060 aa9.1□□□□□ -0.95
RFFL-210ENST00000582308 FAR2Q96K12 515 aa9.1□□□□□ -0.95
RFFL-210ENST00000582308 RTKNQ9BST9 563 aa9.1□□□□□ -0.95
RFFL-210ENST00000582308 MS4A8Q9BY19 250 aa9.1□□□□□ -0.95
RFFL-210ENST00000582308 ACPTQ9BZG2 426 aa9.1□□□□□ -0.95
RFFL-210ENST00000582308 SPRTNQ9H040 489 aaPredicted RBP9.1□□□□□ -0.95
RFFL-210ENST00000582308 KLHL31Q9H511 634 aa9.1□□□□□ -0.95
RFFL-210ENST00000582308 FGF21Q9NSA1 209 aa9.1□□□□□ -0.95
RFFL-210ENST00000582308 OCIAD1Q9NX40 245 aa9.1□□□□□ -0.95
RFFL-210ENST00000582308 DLL3Q9NYJ7 618 aa9.1□□□□□ -0.95
RFFL-210ENST00000582308 ADGRE2Q9UHX3 823 aa9.1□□□□□ -0.95
RFFL-210ENST00000582308 PPT2Q9UMR5 302 aa9.1□□□□□ -0.95
RFFL-210ENST00000582308 CLCA2Q9UQC9 943 aa9.1□□□□□ -0.95
RFFL-210ENST00000582308 CCL27Q9Y4X3 112 aa9.1□□□□□ -0.95
RFFL-210ENST00000582308 USH1CQ9Y6N9 552 aa9.1□□□□□ -0.95
RFFL-210ENST00000582308 A0A1W2PNU3 283 aaPredicted RBP9.09□□□□□ -0.95
RFFL-210ENST00000582308 LRIT2A6NDA9 550 aa9.09□□□□□ -0.95
RFFL-210ENST00000582308 EFCAB7A8K855 629 aa9.09□□□□□ -0.95
RFFL-210ENST00000582308 TMEM150CB9EJG8 249 aa9.09□□□□□ -0.95
RFFL-210ENST00000582308 SLCO1B7G3V0H7 640 aa9.09□□□□□ -0.95
RFFL-210ENST00000582308 TMX2-CTNND1H3BSU7 103 aa9.09□□□□□ -0.95
RFFL-210ENST00000582308 SDHDO14521 159 aa9.09□□□□□ -0.95
RFFL-210ENST00000582308 NDUFS4O43181 175 aa9.09□□□□□ -0.95
RFFL-210ENST00000582308 HYAL3O43820 417 aaPredicted RBP9.09□□□□□ -0.95
RFFL-210ENST00000582308 TGDSO95455 350 aa9.09□□□□□ -0.95
RFFL-210ENST00000582308 CHEK2O96017 543 aa9.09□□□□□ -0.95
RFFL-210ENST00000582308 EIF2S1P05198 315 aaKnown RBP9.09□□□□□ -0.95
RFFL-210ENST00000582308 SERPINA6P08185 405 aa9.09□□□□□ -0.95
RFFL-210ENST00000582308 CCL4P13236 92 aa9.09□□□□□ -0.95
RFFL-210ENST00000582308 ALOX15P16050 662 aaPredicted RBP9.09□□□□□ -0.95
RFFL-210ENST00000582308 SDHBP21912 280 aa9.09□□□□□ -0.95
RFFL-210ENST00000582308 PTX3P26022 381 aaPredicted RBP9.09□□□□□ -0.95
RFFL-210ENST00000582308 SERPINB1P30740 379 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms