RNA–Protein interactions for RNA: ENST00000580738.5

NDEL1-209, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 2

Gene NDEL1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-209ENST00000580738 CCM2LQ9NUG4 571 aaPredicted RBP17.96■□□□□ 0.47
NDEL1-209ENST00000580738 HCFC1P51610 2035 aa17.96■□□□□ 0.47
NDEL1-209ENST00000580738 AKAP6Q13023 2319 aa17.95■□□□□ 0.46
NDEL1-209ENST00000580738 E7EVH7 732 aa17.95■□□□□ 0.46
NDEL1-209ENST00000580738 SMAPO00193 183 aa17.95■□□□□ 0.46
NDEL1-209ENST00000580738 HOXD4P09016 255 aaPredicted RBP17.95■□□□□ 0.46
NDEL1-209ENST00000580738 ATP5DP30049 168 aa17.95■□□□□ 0.46
NDEL1-209ENST00000580738 SLC26A5P58743 744 aa17.95■□□□□ 0.46
NDEL1-209ENST00000580738 TAS2R50P59544 299 aa17.95■□□□□ 0.46
NDEL1-209ENST00000580738 CRADDP78560 199 aa17.95■□□□□ 0.46
NDEL1-209ENST00000580738 ABATP80404 500 aa17.95■□□□□ 0.46
NDEL1-209ENST00000580738 RHAGQ02094 409 aa17.95■□□□□ 0.46
NDEL1-209ENST00000580738 TBX2Q13207 712 aaPredicted RBP17.95■□□□□ 0.46
NDEL1-209ENST00000580738 KLHL38Q2WGJ6 581 aa17.95■□□□□ 0.46
NDEL1-209ENST00000580738 CES4AQ5XG92 561 aa17.95■□□□□ 0.46
NDEL1-209ENST00000580738 PRUNE1Q86TP1 453 aa17.95■□□□□ 0.46
NDEL1-209ENST00000580738 PDSS2Q86YH6 399 aa17.95■□□□□ 0.46
NDEL1-209ENST00000580738 SPNS2Q8IVW8 549 aa17.95■□□□□ 0.46
NDEL1-209ENST00000580738 LGI4Q8N135 537 aa17.95■□□□□ 0.46
NDEL1-209ENST00000580738 MCOLN3Q8TDD5 553 aa17.95■□□□□ 0.46
NDEL1-209ENST00000580738 ATG4AQ8WYN0 398 aa17.95■□□□□ 0.46
NDEL1-209ENST00000580738 TREX1Q9NSU2 369 aa17.95■□□□□ 0.46
NDEL1-209ENST00000580738 KCNN3Q9UGI6 736 aa17.95■□□□□ 0.46
NDEL1-209ENST00000580738 TFECO14948 347 aaPredicted RBP17.94■□□□□ 0.46
NDEL1-209ENST00000580738 CDC40O60508 579 aaKnown RBP eCLIP17.94■□□□□ 0.46
NDEL1-209ENST00000580738 RDH16O75452 317 aa17.94■□□□□ 0.46
NDEL1-209ENST00000580738 CYB561P49447 251 aa17.94■□□□□ 0.46
NDEL1-209ENST00000580738 MEOX1P50221 254 aa17.94■□□□□ 0.46
NDEL1-209ENST00000580738 NR0B1P51843 470 aaKnown RBP17.94■□□□□ 0.46
NDEL1-209ENST00000580738 NAP1L1P55209 391 aaKnown RBP17.94■□□□□ 0.46
NDEL1-209ENST00000580738 MYBPHQ13203 477 aa17.94■□□□□ 0.46
NDEL1-209ENST00000580738 KCNJ11Q14654 390 aa17.94■□□□□ 0.46
NDEL1-209ENST00000580738 SPA17Q15506 151 aa17.94■□□□□ 0.46
NDEL1-209ENST00000580738 CMPK2Q5EBM0 449 aa17.94■□□□□ 0.46
NDEL1-209ENST00000580738 TMEM211Q6ICI0 200 aa17.94■□□□□ 0.46
NDEL1-209ENST00000580738 TMEM214Q6NUQ4 689 aaKnown RBP17.94■□□□□ 0.46
NDEL1-209ENST00000580738 PCGF5Q86SE9 256 aa17.94■□□□□ 0.46
NDEL1-209ENST00000580738 MPP5Q8N3R9 675 aa17.94■□□□□ 0.46
NDEL1-209ENST00000580738 CHDHQ8NE62 594 aaPredicted RBP17.94■□□□□ 0.46
NDEL1-209ENST00000580738 PLPP5Q8NEB5 264 aa17.94■□□□□ 0.46
NDEL1-209ENST00000580738 ZCCHC10Q8TBK6 192 aa17.94■□□□□ 0.46
NDEL1-209ENST00000580738 ELP5Q8TE02 316 aa17.94■□□□□ 0.46
NDEL1-209ENST00000580738 RND1Q92730 232 aa17.94■□□□□ 0.46
NDEL1-209ENST00000580738 LIME1Q9H400 295 aa17.94■□□□□ 0.46
NDEL1-209ENST00000580738 TRIM45Q9H8W5 580 aaPredicted RBP17.94■□□□□ 0.46
NDEL1-209ENST00000580738 FAM114A2Q9NRY5 505 aa17.94■□□□□ 0.46
NDEL1-209ENST00000580738 LANCL2Q9NS86 450 aa17.94■□□□□ 0.46
NDEL1-209ENST00000580738 ABCA4P78363 2273 aa17.94■□□□□ 0.46
NDEL1-209ENST00000580738 HS6ST1O60243 411 aa17.93■□□□□ 0.46
NDEL1-209ENST00000580738 IFNB1P01574 187 aa17.93■□□□□ 0.46
NDEL1-209ENST00000580738 CATP04040 527 aaKnown RBP17.93■□□□□ 0.46
NDEL1-209ENST00000580738 ETS1P14921 441 aa17.93■□□□□ 0.46
NDEL1-209ENST00000580738 CHRM3P20309 590 aa17.93■□□□□ 0.46
NDEL1-209ENST00000580738 NMBRP28336 390 aa17.93■□□□□ 0.46
NDEL1-209ENST00000580738 HSD17B2P37059 387 aa17.93■□□□□ 0.46
NDEL1-209ENST00000580738 FDFT1P37268 417 aa17.93■□□□□ 0.46
NDEL1-209ENST00000580738 ANP32AP39687 249 aaKnown RBP17.93■□□□□ 0.46
NDEL1-209ENST00000580738 ITGA8P53708 1063 aa17.93■□□□□ 0.46
NDEL1-209ENST00000580738 SESN2P58004 480 aaPredicted RBP17.93■□□□□ 0.46
NDEL1-209ENST00000580738 OR4D2P58180 307 aa17.93■□□□□ 0.46
NDEL1-209ENST00000580738 PPP2R2AP63151 447 aa17.93■□□□□ 0.46
NDEL1-209ENST00000580738 EMC4Q5J8M3 183 aa17.93■□□□□ 0.46
NDEL1-209ENST00000580738 PCID2Q5JVF3 399 aa17.93■□□□□ 0.46
NDEL1-209ENST00000580738 THEMIS2Q5TEJ8 643 aa17.93■□□□□ 0.46
NDEL1-209ENST00000580738 SULF2Q8IWU5 870 aa17.93■□□□□ 0.46
NDEL1-209ENST00000580738 LRRC56Q8IYG6 542 aaPredicted RBP17.93■□□□□ 0.46
NDEL1-209ENST00000580738 OTUD6BQ8N6M0 293 aa17.93■□□□□ 0.46
NDEL1-209ENST00000580738 LRRC57Q8N9N7 239 aa17.93■□□□□ 0.46
NDEL1-209ENST00000580738 TC2NQ8N9U0 490 aa17.93■□□□□ 0.46
NDEL1-209ENST00000580738 KCT2Q8NC54 265 aa17.93■□□□□ 0.46
NDEL1-209ENST00000580738 LPGAT1Q92604 370 aa17.93■□□□□ 0.46
NDEL1-209ENST00000580738 PEX11GQ96HA9 241 aa17.93■□□□□ 0.46
NDEL1-209ENST00000580738 EBNA1BP2Q99848 306 aaKnown RBP17.93■□□□□ 0.46
NDEL1-209ENST00000580738 ANKHQ9HCJ1 492 aa17.93■□□□□ 0.46
NDEL1-209ENST00000580738 RAB6BQ9NRW1 208 aa17.93■□□□□ 0.46
NDEL1-209ENST00000580738 PACSIN2Q9UNF0 486 aaPredicted RBP17.93■□□□□ 0.46
NDEL1-209ENST00000580738 FLNAP21333 2647 aaKnown RBP17.92■□□□□ 0.46
NDEL1-209ENST00000580738 KCNE1BA0A087WTH5 132 aa17.92■□□□□ 0.46
NDEL1-209ENST00000580738 ZNF860A6NHJ4 632 aa17.92■□□□□ 0.46
NDEL1-209ENST00000580738 ZNF839A8K0R7 811 aa17.92■□□□□ 0.46
NDEL1-209ENST00000580738 MAGEB17A8MXT2 336 aa17.92■□□□□ 0.46
NDEL1-209ENST00000580738 GOLGA8KD6RF30 607 aa17.92■□□□□ 0.46
NDEL1-209ENST00000580738 GOLGA8TH3BQL2 631 aa17.92■□□□□ 0.46
NDEL1-209ENST00000580738 FAM155BO75949 473 aa17.92■□□□□ 0.46
NDEL1-209ENST00000580738 PDE9AO76083 593 aa17.92■□□□□ 0.46
NDEL1-209ENST00000580738 ZWINTO95229 277 aa17.92■□□□□ 0.46
NDEL1-209ENST00000580738 SYF2O95926 243 aaKnown RBP17.92■□□□□ 0.46
NDEL1-209ENST00000580738 APRTP07741 180 aa17.92■□□□□ 0.46
NDEL1-209ENST00000580738 DRD2P14416 443 aa17.92■□□□□ 0.46
NDEL1-209ENST00000580738 TFEBP19484 476 aa17.92■□□□□ 0.46
NDEL1-209ENST00000580738 ARNTP27540 789 aa17.92■□□□□ 0.46
NDEL1-209ENST00000580738 STIP1P31948 543 aaKnown RBP17.92■□□□□ 0.46
NDEL1-209ENST00000580738 PMPCAQ10713 525 aa17.92■□□□□ 0.46
NDEL1-209ENST00000580738 FOXD4Q12950 439 aaPredicted RBP17.92■□□□□ 0.46
NDEL1-209ENST00000580738 REXO1L1PQ8IX06 675 aa17.92■□□□□ 0.46
NDEL1-209ENST00000580738 POGLUT1Q8NBL1 392 aa17.92■□□□□ 0.46
NDEL1-209ENST00000580738 OR5T3Q8NGG3 340 aa17.92■□□□□ 0.46
NDEL1-209ENST00000580738 TMEM125Q96AQ2 219 aa17.92■□□□□ 0.46
NDEL1-209ENST00000580738 SEC16BQ96JE7 1060 aa17.92■□□□□ 0.46
NDEL1-209ENST00000580738 TP63Q9H3D4 680 aaPredicted RBP17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms