RNA–Protein interactions for RNA: ENST00000579061.5

SS18-212, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-212ENST00000579061 REEP5Q00765 189 aa14.07□□□□□ -0.16
SS18-212ENST00000579061 MEF2AQ02078 507 aaPredicted RBP14.07□□□□□ -0.16
SS18-212ENST00000579061 KCNC4Q03721 635 aa14.07□□□□□ -0.16
SS18-212ENST00000579061 HERC3Q15034 1050 aa14.07□□□□□ -0.16
SS18-212ENST00000579061 CATSPEREQ5SY80 951 aa14.07□□□□□ -0.16
SS18-212ENST00000579061 SULT1C3Q6IMI6 304 aa14.07□□□□□ -0.16
SS18-212ENST00000579061 NXPE4Q6UWF7 544 aa14.07□□□□□ -0.16
SS18-212ENST00000579061 IGFL3Q6UXB1 125 aa14.07□□□□□ -0.16
SS18-212ENST00000579061 LAPTM4BQ86VI4 370 aa14.07□□□□□ -0.16
SS18-212ENST00000579061 GPSM1Q86YR5 675 aa14.07□□□□□ -0.16
SS18-212ENST00000579061 KCT2Q8NC54 265 aa14.07□□□□□ -0.16
SS18-212ENST00000579061 NOA1Q8NC60 698 aaKnown RBP14.07□□□□□ -0.16
SS18-212ENST00000579061 OR9A4Q8NGU2 314 aa14.07□□□□□ -0.16
SS18-212ENST00000579061 KIAA1191Q96A73 305 aa14.07□□□□□ -0.16
SS18-212ENST00000579061 CYTH2Q99418 400 aa14.07□□□□□ -0.16
SS18-212ENST00000579061 YIPF2Q9BWQ6 316 aa14.07□□□□□ -0.16
SS18-212ENST00000579061 CAPS2Q9BXY5 557 aa14.07□□□□□ -0.16
SS18-212ENST00000579061 FUT8Q9BYC5 575 aa14.07□□□□□ -0.16
SS18-212ENST00000579061 TRIM4Q9C037 500 aa14.07□□□□□ -0.16
SS18-212ENST00000579061 CNOT10Q9H9A5 744 aaKnown RBP14.07□□□□□ -0.16
SS18-212ENST00000579061 ANKHQ9HCJ1 492 aa14.07□□□□□ -0.16
SS18-212ENST00000579061 ZFP69BQ9UJL9 534 aa14.07□□□□□ -0.16
SS18-212ENST00000579061 MYO18BQ8IUG5 2567 aa14.06□□□□□ -0.16
SS18-212ENST00000579061 FAM155BO75949 473 aa14.06□□□□□ -0.16
SS18-212ENST00000579061 BMP10O95393 424 aa14.06□□□□□ -0.16
SS18-212ENST00000579061 STATHP02808 62 aa14.06□□□□□ -0.16
SS18-212ENST00000579061 HEXBP07686 556 aa14.06□□□□□ -0.16
SS18-212ENST00000579061 GNAZP19086 355 aa14.06□□□□□ -0.16
SS18-212ENST00000579061 CXCR2P25025 360 aa14.06□□□□□ -0.16
SS18-212ENST00000579061 RGS1Q08116 209 aa14.06□□□□□ -0.16
SS18-212ENST00000579061 TMPRSS11BQ86T26 416 aa14.06□□□□□ -0.16
SS18-212ENST00000579061 ZC3H7AQ8IWR0 971 aaKnown RBP14.06□□□□□ -0.16
SS18-212ENST00000579061 PRSS58Q8IYP2 241 aa14.06□□□□□ -0.16
SS18-212ENST00000579061 AFAP1L2Q8N4X5 818 aa14.06□□□□□ -0.16
SS18-212ENST00000579061 TRPV3Q8NET8 790 aa14.06□□□□□ -0.16
SS18-212ENST00000579061 NT5CQ8TCD5 201 aa14.06□□□□□ -0.16
SS18-212ENST00000579061 TRIM44Q96DX7 344 aaPredicted RBP14.06□□□□□ -0.16
SS18-212ENST00000579061 TSNARE1Q96NA8 513 aa14.06□□□□□ -0.16
SS18-212ENST00000579061 MACROD1Q9BQ69 325 aa14.06□□□□□ -0.16
SS18-212ENST00000579061 SPNS1Q9H2V7 528 aa14.06□□□□□ -0.16
SS18-212ENST00000579061 ACSS3Q9H6R3 686 aa14.06□□□□□ -0.16
SS18-212ENST00000579061 NMRAL1Q9HBL8 299 aa14.06□□□□□ -0.16
SS18-212ENST00000579061 NINJ2Q9NZG7 142 aa14.06□□□□□ -0.16
SS18-212ENST00000579061 GPRC5BQ9NZH0 403 aa14.06□□□□□ -0.16
SS18-212ENST00000579061 SCN2AQ99250 2005 aa14.06□□□□□ -0.16
SS18-212ENST00000579061 LOC102723996A0A087X1L8 192 aa14.05□□□□□ -0.16
SS18-212ENST00000579061 CCDC189A1A4V9 331 aa14.05□□□□□ -0.16
SS18-212ENST00000579061 URADA6NGE7 173 aa14.05□□□□□ -0.16
SS18-212ENST00000579061 NDUFS4O43181 175 aa14.05□□□□□ -0.16
SS18-212ENST00000579061 H2AFYO75367 372 aaKnown RBP14.05□□□□□ -0.16
SS18-212ENST00000579061 SORBS2O94875 1100 aaKnown RBP14.05□□□□□ -0.16
SS18-212ENST00000579061 WDR47O94967 919 aa14.05□□□□□ -0.16
SS18-212ENST00000579061 LTA4HP09960 611 aaKnown RBP14.05□□□□□ -0.16
SS18-212ENST00000579061 SLC35E2BP0CK96 405 aa14.05□□□□□ -0.16
SS18-212ENST00000579061 IL1RNP18510 177 aa14.05□□□□□ -0.16
SS18-212ENST00000579061 IL10P22301 178 aa14.05□□□□□ -0.16
SS18-212ENST00000579061 ITGA3P26006 1051 aa14.05□□□□□ -0.16
SS18-212ENST00000579061 GSTM2P28161 218 aa14.05□□□□□ -0.16
SS18-212ENST00000579061 SNRPNP63162 240 aaKnown RBP14.05□□□□□ -0.16
SS18-212ENST00000579061 FOXK1P85037 733 aa14.05□□□□□ -0.16
SS18-212ENST00000579061 MAT1AQ00266 395 aaKnown RBP14.05□□□□□ -0.16
SS18-212ENST00000579061 CDC16Q13042 620 aa14.05□□□□□ -0.16
SS18-212ENST00000579061 RAPSNQ13702 412 aa14.05□□□□□ -0.16
SS18-212ENST00000579061 SLMAPQ14BN4 828 aa14.05□□□□□ -0.16
SS18-212ENST00000579061 OR4D1Q15615 310 aa14.05□□□□□ -0.16
SS18-212ENST00000579061 SYT16Q17RD7 645 aa14.05□□□□□ -0.16
SS18-212ENST00000579061 NADK2Q4G0N4 442 aa14.05□□□□□ -0.16
SS18-212ENST00000579061 IRAK1BP1Q5VVH5 260 aa14.05□□□□□ -0.16
SS18-212ENST00000579061 TMEM205Q6UW68 189 aa14.05□□□□□ -0.16
SS18-212ENST00000579061 RAPH1Q70E73 1250 aa14.05□□□□□ -0.16
SS18-212ENST00000579061 NDUFAF7Q7L592 441 aa14.05□□□□□ -0.16
SS18-212ENST00000579061 PRSS41Q7RTY9 318 aa14.05□□□□□ -0.16
SS18-212ENST00000579061 TBC1D1Q86TI0 1168 aaPredicted RBP14.05□□□□□ -0.16
SS18-212ENST00000579061 SPATA6LQ8N4H0 392 aa14.05□□□□□ -0.16
SS18-212ENST00000579061 RBMXL3Q8N7X1 1067 aaKnown RBP14.05□□□□□ -0.16
SS18-212ENST00000579061 CEP112Q8N8E3 955 aa14.05□□□□□ -0.16
SS18-212ENST00000579061 PDPRQ8NCN5 879 aa14.05□□□□□ -0.16
SS18-212ENST00000579061 ZNF740Q8NDX6 193 aa14.05□□□□□ -0.16
SS18-212ENST00000579061 OR51Q1Q8NH59 317 aa14.05□□□□□ -0.16
SS18-212ENST00000579061 ZCCHC10Q8TBK6 192 aa14.05□□□□□ -0.16
SS18-212ENST00000579061 STAG3L4Q8TBR4 150 aa14.05□□□□□ -0.16
SS18-212ENST00000579061 TM9SF4Q92544 642 aa14.05□□□□□ -0.16
SS18-212ENST00000579061 PNPLA2Q96AD5 504 aa14.05□□□□□ -0.16
SS18-212ENST00000579061 SEC16BQ96JE7 1060 aa14.05□□□□□ -0.16
SS18-212ENST00000579061 FMO2Q99518 471 aa14.05□□□□□ -0.16
SS18-212ENST00000579061 UNKQ9C0B0 810 aaKnown RBP14.05□□□□□ -0.16
SS18-212ENST00000579061 PITHD1Q9GZP4 211 aaPredicted RBP14.05□□□□□ -0.16
SS18-212ENST00000579061 LHPPQ9H008 270 aa14.05□□□□□ -0.16
SS18-212ENST00000579061 CLMPQ9H6B4 373 aa14.05□□□□□ -0.16
SS18-212ENST00000579061 NT5DC2Q9H857 520 aa14.05□□□□□ -0.16
SS18-212ENST00000579061 CLK4Q9HAZ1 481 aaKnown RBP14.05□□□□□ -0.16
SS18-212ENST00000579061 WWOXQ9NZC7 414 aa14.05□□□□□ -0.16
SS18-212ENST00000579061 COPG2Q9UBF2 871 aa14.05□□□□□ -0.16
SS18-212ENST00000579061 PTBP2Q9UKA9 531 aaKnown RBP14.05□□□□□ -0.16
SS18-212ENST00000579061 UBR5O95071 2799 aaPredicted RBP14.05□□□□□ -0.16
SS18-212ENST00000579061 NCF1BA6NI72 391 aaPredicted RBP14.04□□□□□ -0.16
SS18-212ENST00000579061 NCF1CA8MVU1 366 aaPredicted RBP14.04□□□□□ -0.16
SS18-212ENST00000579061 MASP2O00187 686 aa14.04□□□□□ -0.16
SS18-212ENST00000579061 FFAR3O14843 346 aa14.04□□□□□ -0.16
SS18-212ENST00000579061 GPR42O15529 346 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms