RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 BLMHQ13867 455 aa10.69□□□□□ -0.7
SKA2-204ENST00000578519 RPE65Q16518 533 aa10.69□□□□□ -0.7
SKA2-204ENST00000578519 UGT8Q16880 541 aa10.69□□□□□ -0.7
SKA2-204ENST00000578519 SFT2D3Q587I9 215 aa10.69□□□□□ -0.7
SKA2-204ENST00000578519 CCNYL2Q5T2Q4 361 aa10.69□□□□□ -0.7
SKA2-204ENST00000578519 DEPDC1Q5TB30 811 aa10.69□□□□□ -0.7
SKA2-204ENST00000578519 FAM219BQ5XKK7 198 aa10.69□□□□□ -0.7
SKA2-204ENST00000578519 ABRAXAS1Q6UWZ7 409 aa10.69□□□□□ -0.7
SKA2-204ENST00000578519 RNF111Q6ZNA4 994 aa10.69□□□□□ -0.7
SKA2-204ENST00000578519 GCNT7Q6ZNI0 430 aa10.69□□□□□ -0.7
SKA2-204ENST00000578519 COMMD6Q7Z4G1 85 aa10.69□□□□□ -0.7
SKA2-204ENST00000578519 FAM124AQ86V42 546 aa10.69□□□□□ -0.7
SKA2-204ENST00000578519 DCP2Q8IU60 420 aaKnown RBP10.69□□□□□ -0.7
SKA2-204ENST00000578519 SLC30A8Q8IWU4 369 aa10.69□□□□□ -0.7
SKA2-204ENST00000578519 PHACTR4Q8IZ21 702 aa10.69□□□□□ -0.7
SKA2-204ENST00000578519 ADGRG5Q8IZF4 528 aa10.69□□□□□ -0.7
SKA2-204ENST00000578519 GPR156Q8NFN8 814 aa10.69□□□□□ -0.7
SKA2-204ENST00000578519 OR4K1Q8NGD4 311 aa10.69□□□□□ -0.7
SKA2-204ENST00000578519 LRTOMTQ8WZ04 291 aa10.69□□□□□ -0.7
SKA2-204ENST00000578519 FIG4Q92562 907 aa10.69□□□□□ -0.7
SKA2-204ENST00000578519 NCLNQ969V3 563 aa10.69□□□□□ -0.7
SKA2-204ENST00000578519 C11orf24Q96F05 449 aaPredicted RBP10.69□□□□□ -0.7
SKA2-204ENST00000578519 SHDQ96IW2 340 aa10.69□□□□□ -0.7
SKA2-204ENST00000578519 IL17FQ96PD4 163 aa10.69□□□□□ -0.7
SKA2-204ENST00000578519 HHIPQ96QV1 700 aa10.69□□□□□ -0.7
SKA2-204ENST00000578519 NELL2Q99435 816 aa10.69□□□□□ -0.7
SKA2-204ENST00000578519 CPPED1Q9BRF8 314 aaPredicted RBP10.69□□□□□ -0.7
SKA2-204ENST00000578519 ASPSCR1Q9BZE9 553 aa10.69□□□□□ -0.7
SKA2-204ENST00000578519 REXO4Q9GZR2 422 aaKnown RBP10.69□□□□□ -0.7
SKA2-204ENST00000578519 KAT8Q9H7Z6 458 aaKnown RBP10.69□□□□□ -0.7
SKA2-204ENST00000578519 UBE2ZQ9H832 354 aaPredicted RBP10.69□□□□□ -0.7
SKA2-204ENST00000578519 MRPS30Q9NP92 439 aaKnown RBP10.69□□□□□ -0.7
SKA2-204ENST00000578519 MIEF1Q9NQG6 463 aa10.69□□□□□ -0.7
SKA2-204ENST00000578519 OLAHQ9NV23 265 aa10.69□□□□□ -0.7
SKA2-204ENST00000578519 TRNAU1APQ9NX07 287 aaKnown RBP10.69□□□□□ -0.7
SKA2-204ENST00000578519 OR6C2Q9NZP2 312 aa10.69□□□□□ -0.7
SKA2-204ENST00000578519 SLAMF8Q9P0V8 285 aa10.69□□□□□ -0.7
SKA2-204ENST00000578519 BAG5Q9UL15 447 aa10.69□□□□□ -0.7
SKA2-204ENST00000578519 KCNK6Q9Y257 313 aa10.69□□□□□ -0.7
SKA2-204ENST00000578519 GMEB1Q9Y692 573 aa10.69□□□□□ -0.7
SKA2-204ENST00000578519 TRBV5-3A0A0A0MS03 114 aa10.68□□□□□ -0.7
SKA2-204ENST00000578519 CHURC1-FNTBB4DL54 471 aa10.68□□□□□ -0.7
SKA2-204ENST00000578519 CAPN5O15484 640 aaPredicted RBP10.68□□□□□ -0.7
SKA2-204ENST00000578519 TBX19O60806 448 aa10.68□□□□□ -0.7
SKA2-204ENST00000578519 TIPRLO75663 272 aa10.68□□□□□ -0.7
SKA2-204ENST00000578519 TACR1P25103 407 aa10.68□□□□□ -0.7
SKA2-204ENST00000578519 BLKP51451 505 aa10.68□□□□□ -0.7
SKA2-204ENST00000578519 TPMTP51580 245 aa10.68□□□□□ -0.7
SKA2-204ENST00000578519 AQP4P55087 323 aa10.68□□□□□ -0.7
SKA2-204ENST00000578519 OR4D2P58180 307 aa10.68□□□□□ -0.7
SKA2-204ENST00000578519 ILF3Q12906 894 aaKnown RBP eCLIP10.68□□□□□ -0.72e-15■■■■□ 22.5
SKA2-204ENST00000578519 BIRC2Q13490 618 aa10.68□□□□□ -0.7
SKA2-204ENST00000578519 MYBPC3Q14896 1274 aa10.68□□□□□ -0.7
SKA2-204ENST00000578519 SKIV2LQ15477 1246 aaKnown RBP10.68□□□□□ -0.7
SKA2-204ENST00000578519 ATP6AP1Q15904 470 aa10.68□□□□□ -0.7
SKA2-204ENST00000578519 HKDC1Q2TB90 917 aa10.68□□□□□ -0.7
SKA2-204ENST00000578519 KHDRBS2Q5VWX1 349 aaKnown RBP10.68□□□□□ -0.7
SKA2-204ENST00000578519 CPZQ66K79 652 aa10.68□□□□□ -0.7
SKA2-204ENST00000578519 PPP4R4Q6NUP7 873 aa10.68□□□□□ -0.7
SKA2-204ENST00000578519 XKR5Q6UX68 686 aa10.68□□□□□ -0.7
SKA2-204ENST00000578519 ADCK2Q7Z695 626 aa10.68□□□□□ -0.7
SKA2-204ENST00000578519 SLC9B2Q86UD5 537 aa10.68□□□□□ -0.7
SKA2-204ENST00000578519 CALHM3Q86XJ0 350 aa10.68□□□□□ -0.7
SKA2-204ENST00000578519 TICAM1Q8IUC6 712 aa10.68□□□□□ -0.7
SKA2-204ENST00000578519 ADHFE1Q8IWW8 467 aa10.68□□□□□ -0.7
SKA2-204ENST00000578519 ST13P4Q8IZP2 240 aaPredicted RBP10.68□□□□□ -0.7
SKA2-204ENST00000578519 AVL9Q8NBF6 648 aa10.68□□□□□ -0.7
SKA2-204ENST00000578519 OR7A2PQ8NGA2 310 aa10.68□□□□□ -0.7
SKA2-204ENST00000578519 C16orf78Q8WTQ4 265 aa10.68□□□□□ -0.7
SKA2-204ENST00000578519 GFM2Q969S9 779 aaKnown RBP10.68□□□□□ -0.7
SKA2-204ENST00000578519 SLCO4A1Q96BD0 722 aa10.68□□□□□ -0.7
SKA2-204ENST00000578519 RNF145Q96MT1 663 aa10.68□□□□□ -0.7
SKA2-204ENST00000578519 HS3ST6Q96QI5 342 aa10.68□□□□□ -0.7
SKA2-204ENST00000578519 ACAT2Q9BWD1 397 aa10.68□□□□□ -0.7
SKA2-204ENST00000578519 FAIM2Q9BWQ8 316 aa10.68□□□□□ -0.7
SKA2-204ENST00000578519 GSDMCQ9BYG8 508 aa10.68□□□□□ -0.7
SKA2-204ENST00000578519 DNAAF2Q9NVR5 837 aaKnown RBP10.68□□□□□ -0.7
SKA2-204ENST00000578519 PCOLCE2Q9UKZ9 415 aa10.68□□□□□ -0.7
SKA2-204ENST00000578519 PLAGL1Q9UM63 463 aa10.68□□□□□ -0.7
SKA2-204ENST00000578519 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.68□□□□□ -0.7
SKA2-204ENST00000578519 COL4A3Q01955 1670 aa10.68□□□□□ -0.7
SKA2-204ENST00000578519 TCF20Q9UGU0 1960 aaKnown RBP10.68□□□□□ -0.7
SKA2-204ENST00000578519 DOCK8Q8NF50 2099 aa10.67□□□□□ -0.7
SKA2-204ENST00000578519 CKAP5Q14008 2032 aa10.67□□□□□ -0.7
SKA2-204ENST00000578519 TCRBV5S2A0A599 114 aa10.67□□□□□ -0.7
SKA2-204ENST00000578519 KRT87PA6NCN2 255 aa10.67□□□□□ -0.7
SKA2-204ENST00000578519 ANTXRLA6NF34 631 aa10.67□□□□□ -0.7
SKA2-204ENST00000578519 GABRR3A8MPY1 467 aa10.67□□□□□ -0.7
SKA2-204ENST00000578519 GNGT2O14610 69 aa10.67□□□□□ -0.7
SKA2-204ENST00000578519 CLOCKO15516 846 aa10.67□□□□□ -0.7
SKA2-204ENST00000578519 OR1F1O43749 312 aa10.67□□□□□ -0.7
SKA2-204ENST00000578519 GPR37L1O60883 481 aa10.67□□□□□ -0.7
SKA2-204ENST00000578519 CREG1O75629 220 aa10.67□□□□□ -0.7
SKA2-204ENST00000578519 IFNA14P01570 189 aa10.67□□□□□ -0.7
SKA2-204ENST00000578519 IGLV3-19P01714 112 aa10.67□□□□□ -0.7
SKA2-204ENST00000578519 KLK1P06870 262 aa10.67□□□□□ -0.7
SKA2-204ENST00000578519 NCK1P16333 377 aa10.67□□□□□ -0.7
SKA2-204ENST00000578519 ENGP17813 658 aa10.67□□□□□ -0.7
SKA2-204ENST00000578519 GPX2P18283 190 aa10.67□□□□□ -0.7
SKA2-204ENST00000578519 GABRG2P18507 467 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms