RNA–Protein interactions for RNA: ENST00000578367.1

LINC01543-201, Transcript of long intergenic non-protein coding RNA 1543, humanhuman

TSL 5 BASIC

Gene LINC01543, Length 900 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01543-201ENST00000578367 MID1IP1Q9NPA3 183 aa13.25□□□□□ -0.29
LINC01543-201ENST00000578367 PFDN4Q9NQP4 134 aa13.25□□□□□ -0.29
LINC01543-201ENST00000578367 NMRK1Q9NWW6 199 aa13.25□□□□□ -0.29
LINC01543-201ENST00000578367 HAO1Q9UJM8 370 aa13.25□□□□□ -0.29
LINC01543-201ENST00000578367 ZNF490Q9ULM2 529 aaPredicted RBP13.25□□□□□ -0.29
LINC01543-201ENST00000578367 SATB2Q9UPW6 733 aa13.25□□□□□ -0.29
LINC01543-201ENST00000578367 RNF11Q9Y3C5 154 aa13.25□□□□□ -0.29
LINC01543-201ENST00000578367 SLC22A7Q9Y694 548 aa13.25□□□□□ -0.29
LINC01543-201ENST00000578367 FEZF1A0PJY2 475 aa13.24□□□□□ -0.29
LINC01543-201ENST00000578367 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.24□□□□□ -0.29
LINC01543-201ENST00000578367 PRAMEF10O60809 474 aa13.24□□□□□ -0.29
LINC01543-201ENST00000578367 CHEK2O96017 543 aa13.24□□□□□ -0.29
LINC01543-201ENST00000578367 PTX3P26022 381 aaPredicted RBP13.24□□□□□ -0.29
LINC01543-201ENST00000578367 TSFMP43897 325 aaKnown RBP13.24□□□□□ -0.29
LINC01543-201ENST00000578367 GCGRP47871 477 aa13.24□□□□□ -0.29
LINC01543-201ENST00000578367 HK2P52789 917 aa13.24□□□□□ -0.29
LINC01543-201ENST00000578367 CLDN6P56747 220 aa13.24□□□□□ -0.29
LINC01543-201ENST00000578367 VSX2P58304 361 aaPredicted RBP13.24□□□□□ -0.29
LINC01543-201ENST00000578367 ABCE1P61221 599 aaKnown RBP13.24□□□□□ -0.29
LINC01543-201ENST00000578367 GABREP78334 506 aa13.24□□□□□ -0.29
LINC01543-201ENST00000578367 TGM3Q08188 693 aa13.24□□□□□ -0.29
LINC01543-201ENST00000578367 ZRSR2Q15696 482 aaKnown RBP13.24□□□□□ -0.29
LINC01543-201ENST00000578367 GPR19Q15760 415 aa13.24□□□□□ -0.29
LINC01543-201ENST00000578367 CPSF6Q16630 551 aaKnown RBP eCLIP13.24□□□□□ -0.29
LINC01543-201ENST00000578367 MUM1Q2TAK8 710 aa13.24□□□□□ -0.29
LINC01543-201ENST00000578367 ADPRMQ3LIE5 342 aa13.24□□□□□ -0.29
LINC01543-201ENST00000578367 ARL13AQ5H913 290 aaPredicted RBP13.24□□□□□ -0.29
LINC01543-201ENST00000578367 C3orf38Q5JPI3 329 aa13.24□□□□□ -0.29
LINC01543-201ENST00000578367 TTC19Q6DKK2 380 aaPredicted RBP13.24□□□□□ -0.29
LINC01543-201ENST00000578367 RHBDD2Q6NTF9 364 aa13.24□□□□□ -0.29
LINC01543-201ENST00000578367 LETMD1Q6P1Q0 360 aa13.24□□□□□ -0.29
LINC01543-201ENST00000578367 RGS9BPQ6ZS82 235 aa13.24□□□□□ -0.29
LINC01543-201ENST00000578367 CHSY3Q70JA7 882 aa13.24□□□□□ -0.29
LINC01543-201ENST00000578367 VN1R4Q7Z5H5 301 aa13.24□□□□□ -0.29
LINC01543-201ENST00000578367 SYVN1Q86TM6 617 aa13.24□□□□□ -0.29
LINC01543-201ENST00000578367 CUZD1Q86UP6 607 aa13.24□□□□□ -0.29
LINC01543-201ENST00000578367 MYLK4Q86YV6 388 aaPredicted RBP13.24□□□□□ -0.29
LINC01543-201ENST00000578367 CLYBLQ8N0X4 340 aa13.24□□□□□ -0.29
LINC01543-201ENST00000578367 AFAP1L2Q8N4X5 818 aa13.24□□□□□ -0.29
LINC01543-201ENST00000578367 ANKRD53Q8N9V6 530 aa13.24□□□□□ -0.29
LINC01543-201ENST00000578367 ZNF740Q8NDX6 193 aa13.24□□□□□ -0.29
LINC01543-201ENST00000578367 OR1L3Q8NH93 324 aa13.24□□□□□ -0.29
LINC01543-201ENST00000578367 FAM76AQ8TAV0 307 aa13.24□□□□□ -0.29
LINC01543-201ENST00000578367 WDR20Q8TBZ3 569 aa13.24□□□□□ -0.29
LINC01543-201ENST00000578367 METTL6Q8TCB7 284 aa13.24□□□□□ -0.29
LINC01543-201ENST00000578367 PROKR1Q8TCW9 393 aa13.24□□□□□ -0.29
LINC01543-201ENST00000578367 MGARPQ8TDB4 240 aa13.24□□□□□ -0.29
LINC01543-201ENST00000578367 CREB3L4Q8TEY5 395 aa13.24□□□□□ -0.29
LINC01543-201ENST00000578367 ZNF473Q8WTR7 871 aaKnown RBP13.24□□□□□ -0.29
LINC01543-201ENST00000578367 DYDC1Q8WWB3 177 aa13.24□□□□□ -0.29
LINC01543-201ENST00000578367 CMTM7Q96FZ5 175 aa13.24□□□□□ -0.29
LINC01543-201ENST00000578367 METTL2AQ96IZ6 378 aaKnown RBP13.24□□□□□ -0.29
LINC01543-201ENST00000578367 FAR2Q96K12 515 aa13.24□□□□□ -0.29
LINC01543-201ENST00000578367 NDC1Q9BTX1 674 aa13.24□□□□□ -0.29
LINC01543-201ENST00000578367 ILKAPQ9H0C8 392 aaPredicted RBP13.24□□□□□ -0.29
LINC01543-201ENST00000578367 ELOVL6Q9H5J4 265 aa13.24□□□□□ -0.29
LINC01543-201ENST00000578367 BRF2Q9HAW0 419 aa13.24□□□□□ -0.29
LINC01543-201ENST00000578367 PISDQ9UG56 409 aa13.24□□□□□ -0.29
LINC01543-201ENST00000578367 ZNF225Q9UK10 706 aa13.24□□□□□ -0.29
LINC01543-201ENST00000578367 CDC14AQ9UNH5 594 aa13.24□□□□□ -0.29
LINC01543-201ENST00000578367 RAP2CQ9Y3L5 183 aa13.24□□□□□ -0.29
LINC01543-201ENST00000578367 A0A088AWK7 358 aa13.23□□□□□ -0.29
LINC01543-201ENST00000578367 A0A1W2PNU3 283 aaPredicted RBP13.23□□□□□ -0.29
LINC01543-201ENST00000578367 WDR91A4D1P6 747 aa13.23□□□□□ -0.29
LINC01543-201ENST00000578367 FAM149AA5PLN7 773 aa13.23□□□□□ -0.29
LINC01543-201ENST00000578367 CDRT15L2A8MXV6 281 aa13.23□□□□□ -0.29
LINC01543-201ENST00000578367 UBFD1O14562 309 aaKnown RBP13.23□□□□□ -0.29
LINC01543-201ENST00000578367 AZIN1O14977 448 aa13.23□□□□□ -0.29
LINC01543-201ENST00000578367 CPNE3O75131 537 aaKnown RBP13.23□□□□□ -0.29
LINC01543-201ENST00000578367 SNNO75324 88 aaPredicted RBP13.23□□□□□ -0.29
LINC01543-201ENST00000578367 ULK1O75385 1050 aa13.23□□□□□ -0.29
LINC01543-201ENST00000578367 CRCPO75575 148 aa13.23□□□□□ -0.29
LINC01543-201ENST00000578367 OR4F21O95013 312 aa13.23□□□□□ -0.29
LINC01543-201ENST00000578367 TNFSF15O95150 251 aa13.23□□□□□ -0.29
LINC01543-201ENST00000578367 ZNF10P21506 573 aaPredicted RBP13.23□□□□□ -0.29
LINC01543-201ENST00000578367 BGNP21810 368 aa13.23□□□□□ -0.29
LINC01543-201ENST00000578367 HMOX2P30519 316 aa13.23□□□□□ -0.29
LINC01543-201ENST00000578367 SLC1A6P48664 564 aa13.23□□□□□ -0.29
LINC01543-201ENST00000578367 MEF2AQ02078 507 aaPredicted RBP13.23□□□□□ -0.29
LINC01543-201ENST00000578367 CYP4F3Q08477 520 aa13.23□□□□□ -0.29
LINC01543-201ENST00000578367 CSTF3Q12996 717 aaKnown RBP13.23□□□□□ -0.29
LINC01543-201ENST00000578367 CUL3Q13618 768 aa13.23□□□□□ -0.29
LINC01543-201ENST00000578367 HERC3Q15034 1050 aa13.23□□□□□ -0.29
LINC01543-201ENST00000578367 FRMPD2BQ6IN97 320 aa13.23□□□□□ -0.29
LINC01543-201ENST00000578367 PRMT9Q6P2P2 845 aa13.23□□□□□ -0.29
LINC01543-201ENST00000578367 ABHD13Q7L211 337 aa13.23□□□□□ -0.29
LINC01543-201ENST00000578367 TMEM126BQ8IUX1 230 aa13.23□□□□□ -0.29
LINC01543-201ENST00000578367 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.23□□□□□ -0.29
LINC01543-201ENST00000578367 MDM1Q8TC05 714 aa13.23□□□□□ -0.29
LINC01543-201ENST00000578367 LRRC8CQ8TDW0 803 aa13.23□□□□□ -0.29
LINC01543-201ENST00000578367 CKAP2Q8WWK9 683 aa13.23□□□□□ -0.29
LINC01543-201ENST00000578367 ZNF75CPQ92670 426 aaPredicted RBP13.23□□□□□ -0.29
LINC01543-201ENST00000578367 MAGEB18Q96M61 343 aa13.23□□□□□ -0.29
LINC01543-201ENST00000578367 ZNF578Q96N58 590 aaPredicted RBP13.23□□□□□ -0.29
LINC01543-201ENST00000578367 SCNM1Q9BWG6 230 aa13.23□□□□□ -0.29
LINC01543-201ENST00000578367 SLC6A16Q9GZN6 736 aa13.23□□□□□ -0.29
LINC01543-201ENST00000578367 ROGDIQ9GZN7 287 aa13.23□□□□□ -0.29
LINC01543-201ENST00000578367 SPNS1Q9H2V7 528 aa13.23□□□□□ -0.29
LINC01543-201ENST00000578367 THSD1Q9NS62 852 aa13.23□□□□□ -0.29
LINC01543-201ENST00000578367 DKK4Q9UBT3 224 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms