RNA–Protein interactions for RNA: ENST00000578329.1

PPP4R1-209, Transcript of protein phosphatase 4 regulatory subunit 1, human

TSL 3

Gene PPP4R1, Length 350 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R1-209	ENST00000578329	ZKSCAN5	Q9Y2L8	839 aa		4.19	□□□□□ -1.74
PPP4R1-209	ENST00000578329	PPP2R2C	Q9Y2T4	447 aa		4.19	□□□□□ -1.74
PPP4R1-209	ENST00000578329	C2CD3	Q4AC94	2353 aa		4.19	□□□□□ -1.74
PPP4R1-209	ENST00000578329	HCFC1	P51610	2035 aa		4.19	□□□□□ -1.74
PPP4R1-209	ENST00000578329	NCKAP5	O14513	1909 aa		4.19	□□□□□ -1.74
PPP4R1-209	ENST00000578329	ITPR3	Q14573	2671 aa		4.18	□□□□□ -1.74
PPP4R1-209	ENST00000578329	AKAP6	Q13023	2319 aa		4.18	□□□□□ -1.74
PPP4R1-209	ENST00000578329	DNAJC13	O75165	2243 aa		4.18	□□□□□ -1.74
PPP4R1-209	ENST00000578329	ZFHX3	Q15911	3703 aa		4.18	□□□□□ -1.74
PPP4R1-209	ENST00000578329		A0A0G2JMM0	328 aa		4.18	□□□□□ -1.74
PPP4R1-209	ENST00000578329		A0A1W2PPB8	328 aa		4.18	□□□□□ -1.74
PPP4R1-209	ENST00000578329		A0A1W2PRS3	328 aa		4.18	□□□□□ -1.74
PPP4R1-209	ENST00000578329	ARHGAP10	A1A4S6	786 aa		4.18	□□□□□ -1.74
PPP4R1-209	ENST00000578329	OR5H15	A6NDH6	313 aa		4.18	□□□□□ -1.74
PPP4R1-209	ENST00000578329	SDR42E2	A6NKP2	422 aa		4.18	□□□□□ -1.74
PPP4R1-209	ENST00000578329	KIR3DP1	A8MWS1	328 aa		4.18	□□□□□ -1.74
PPP4R1-209	ENST00000578329		H0YIG0	161 aa		4.18	□□□□□ -1.74
PPP4R1-209	ENST00000578329	CDC7	O00311	574 aa		4.18	□□□□□ -1.74
PPP4R1-209	ENST00000578329	MAP2K7	O14733	419 aa		4.18	□□□□□ -1.74
PPP4R1-209	ENST00000578329	KPNA5	O15131	536 aa		4.18	□□□□□ -1.74
PPP4R1-209	ENST00000578329	TAPBP	O15533	448 aa		4.18	□□□□□ -1.74
PPP4R1-209	ENST00000578329	CHST10	O43529	356 aa		4.18	□□□□□ -1.74
PPP4R1-209	ENST00000578329	GALR3	O60755	368 aa	Predicted RBP	4.18	□□□□□ -1.74
PPP4R1-209	ENST00000578329	PRAMEF2	O60811	474 aa		4.18	□□□□□ -1.74
PPP4R1-209	ENST00000578329	CDC123	O75794	336 aa	Predicted RBP	4.18	□□□□□ -1.74
PPP4R1-209	ENST00000578329	IPO13	O94829	963 aa	Known RBP	4.18	□□□□□ -1.74
PPP4R1-209	ENST00000578329	UNC5C	O95185	931 aa		4.18	□□□□□ -1.74
PPP4R1-209	ENST00000578329	IGHE	P01854	428 aa		4.18	□□□□□ -1.74
PPP4R1-209	ENST00000578329	RPN2	P04844	631 aa		4.18	□□□□□ -1.74
PPP4R1-209	ENST00000578329	ALPP	P05187	535 aa		4.18	□□□□□ -1.74
PPP4R1-209	ENST00000578329	CD63	P08962	238 aa		4.18	□□□□□ -1.74
PPP4R1-209	ENST00000578329	PIM1	P11309	404 aa	Predicted RBP	4.18	□□□□□ -1.74
PPP4R1-209	ENST00000578329	IGFBP2	P18065	325 aa		4.18	□□□□□ -1.74
PPP4R1-209	ENST00000578329	CD22	P20273	847 aa		4.18	□□□□□ -1.74
PPP4R1-209	ENST00000578329	CHRM3	P20309	590 aa		4.18	□□□□□ -1.74
PPP4R1-209	ENST00000578329	FDXR	P22570	491 aa		4.18	□□□□□ -1.74
PPP4R1-209	ENST00000578329	CMPK1	P30085	196 aa		4.18	□□□□□ -1.74
PPP4R1-209	ENST00000578329	RPA3	P35244	121 aa	Predicted RBP	4.18	□□□□□ -1.74
PPP4R1-209	ENST00000578329	CETN2	P41208	172 aa		4.18	□□□□□ -1.74
PPP4R1-209	ENST00000578329	CA7	P43166	264 aa		4.18	□□□□□ -1.74
PPP4R1-209	ENST00000578329	XCR1	P46094	333 aa		4.18	□□□□□ -1.74
PPP4R1-209	ENST00000578329	SCTR	P47872	440 aa		4.18	□□□□□ -1.74
PPP4R1-209	ENST00000578329	MRPS25	P82663	173 aa	Known RBP	4.18	□□□□□ -1.74
PPP4R1-209	ENST00000578329	CBLB	Q13191	982 aa		4.18	□□□□□ -1.74
PPP4R1-209	ENST00000578329	NAE1	Q13564	534 aa		4.18	□□□□□ -1.74
PPP4R1-209	ENST00000578329	RUNX2	Q13950	521 aa		4.18	□□□□□ -1.74
PPP4R1-209	ENST00000578329	ZNF460	Q14592	562 aa		4.18	□□□□□ -1.74
PPP4R1-209	ENST00000578329	CRYM	Q14894	314 aa		4.18	□□□□□ -1.74
PPP4R1-209	ENST00000578329	TMED2	Q15363	201 aa		4.18	□□□□□ -1.74
PPP4R1-209	ENST00000578329	ACER2	Q5QJU3	275 aa		4.18	□□□□□ -1.74
PPP4R1-209	ENST00000578329	HP1BP3	Q5SSJ5	553 aa	Predicted RBP	4.18	□□□□□ -1.74
PPP4R1-209	ENST00000578329	TEDDM1	Q5T9Z0	273 aa		4.18	□□□□□ -1.74
PPP4R1-209	ENST00000578329	GARNL3	Q5VVW2	1013 aa		4.18	□□□□□ -1.74
PPP4R1-209	ENST00000578329	STEAP4	Q687X5	459 aa		4.18	□□□□□ -1.74
PPP4R1-209	ENST00000578329	PLAG1	Q6DJT9	500 aa		4.18	□□□□□ -1.74
PPP4R1-209	ENST00000578329	SPINK14	Q6IE38	97 aa		4.18	□□□□□ -1.74
PPP4R1-209	ENST00000578329	MRNIP	Q6NTE8	343 aa		4.18	□□□□□ -1.74
PPP4R1-209	ENST00000578329	ZNF449	Q6P9G9	518 aa		4.18	□□□□□ -1.74
PPP4R1-209	ENST00000578329	AGTRAP	Q6RW13	159 aa		4.18	□□□□□ -1.74
PPP4R1-209	ENST00000578329		Q6ZPB1	254 aa	Predicted RBP	4.18	□□□□□ -1.74
PPP4R1-209	ENST00000578329	UBE2R2	Q712K3	238 aa	Predicted RBP	4.18	□□□□□ -1.74
PPP4R1-209	ENST00000578329	CPEB2	Q7Z5Q1	589 aa	Known RBP	4.18	□□□□□ -1.74
PPP4R1-209	ENST00000578329	UBE3D	Q7Z6J8	389 aa		4.18	□□□□□ -1.74
PPP4R1-209	ENST00000578329	CEP97	Q8IW35	865 aa		4.18	□□□□□ -1.74
PPP4R1-209	ENST00000578329	TTC29	Q8NA56	475 aa	Predicted RBP	4.18	□□□□□ -1.74
PPP4R1-209	ENST00000578329	MFSD9	Q8NBP5	474 aa		4.18	□□□□□ -1.74
PPP4R1-209	ENST00000578329	APCDD1L	Q8NCL9	501 aa		4.18	□□□□□ -1.74
PPP4R1-209	ENST00000578329	PLPP5	Q8NEB5	264 aa		4.18	□□□□□ -1.74
PPP4R1-209	ENST00000578329	ZCCHC10	Q8TBK6	192 aa		4.18	□□□□□ -1.74
PPP4R1-209	ENST00000578329	ELP5	Q8TE02	316 aa		4.18	□□□□□ -1.74
PPP4R1-209	ENST00000578329	UTP15	Q8TED0	518 aa	Known RBP	4.18	□□□□□ -1.74
PPP4R1-209	ENST00000578329	N4BP2L2	Q92802	583 aa	Predicted RBP	4.18	□□□□□ -1.74
PPP4R1-209	ENST00000578329	SLCO2A1	Q92959	643 aa		4.18	□□□□□ -1.74
PPP4R1-209	ENST00000578329	NEIL2	Q969S2	332 aa		4.18	□□□□□ -1.74
PPP4R1-209	ENST00000578329	MARVELD3	Q96A59	401 aa		4.18	□□□□□ -1.74
PPP4R1-209	ENST00000578329	QRFPR	Q96P65	431 aa		4.18	□□□□□ -1.74
PPP4R1-209	ENST00000578329	ALS2CR12	Q96Q35	445 aa		4.18	□□□□□ -1.74
PPP4R1-209	ENST00000578329	PHF12	Q96QT6	1004 aa		4.18	□□□□□ -1.74
PPP4R1-209	ENST00000578329	DMRTA2	Q96SC8	542 aa		4.18	□□□□□ -1.74
PPP4R1-209	ENST00000578329	FERMT1	Q9BQL6	677 aa		4.18	□□□□□ -1.74
PPP4R1-209	ENST00000578329	SLC29A3	Q9BZD2	475 aa		4.18	□□□□□ -1.74
PPP4R1-209	ENST00000578329	SLC6A16	Q9GZN6	736 aa		4.18	□□□□□ -1.74
PPP4R1-209	ENST00000578329	DRC3	Q9H069	523 aa		4.18	□□□□□ -1.74
PPP4R1-209	ENST00000578329	DDX47	Q9H0S4	455 aa	Known RBP	4.18	□□□□□ -1.74
PPP4R1-209	ENST00000578329	TSPAN10	Q9H1Z9	355 aa	Predicted RBP	4.18	□□□□□ -1.74
PPP4R1-209	ENST00000578329	TRIM45	Q9H8W5	580 aa	Predicted RBP	4.18	□□□□□ -1.74
PPP4R1-209	ENST00000578329	MKKS	Q9NPJ1	570 aa	Predicted RBP	4.18	□□□□□ -1.74
PPP4R1-209	ENST00000578329	NPDC1	Q9NQX5	325 aa	Predicted RBP	4.18	□□□□□ -1.74
PPP4R1-209	ENST00000578329	IARS2	Q9NSE4	1012 aa	Known RBP	4.18	□□□□□ -1.74
PPP4R1-209	ENST00000578329	DEPP	Q9NTK1	212 aa		4.18	□□□□□ -1.74
PPP4R1-209	ENST00000578329	ABCF3	Q9NUQ8	709 aa		4.18	□□□□□ -1.74
PPP4R1-209	ENST00000578329	OLAH	Q9NV23	265 aa		4.18	□□□□□ -1.74
PPP4R1-209	ENST00000578329	TMEM184C	Q9NVA4	438 aa		4.18	□□□□□ -1.74
PPP4R1-209	ENST00000578329	INTS10	Q9NVR2	710 aa	Known RBP	4.18	□□□□□ -1.74
PPP4R1-209	ENST00000578329	IRAK4	Q9NWZ3	460 aa		4.18	□□□□□ -1.74
PPP4R1-209	ENST00000578329	TINAG	Q9UJW2	476 aa		4.18	□□□□□ -1.74
PPP4R1-209	ENST00000578329	NAALAD2	Q9Y3Q0	740 aa		4.18	□□□□□ -1.74
PPP4R1-209	ENST00000578329	TEX264	Q9Y6I9	313 aa		4.18	□□□□□ -1.74
PPP4R1-209	ENST00000578329	MED13L	Q71F56	2210 aa		4.18	□□□□□ -1.74
PPP4R1-209	ENST00000578329	KIAA1549	Q9HCM3	1950 aa		4.18	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms