RNA–Protein interactions for RNA: ENST00000578317.5

COPS3-215, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-215ENST00000578317 PFDN2Q9UHV9 154 aa7.7□□□□□ -1.18
COPS3-215ENST00000578317 ADAM30Q9UKF2 790 aa7.7□□□□□ -1.18
COPS3-215ENST00000578317 SNX7Q9UNH6 387 aa7.7□□□□□ -1.18
COPS3-215ENST00000578317 TSC22D4Q9Y3Q8 395 aa7.7□□□□□ -1.18
COPS3-215ENST00000578317 TRAF6Q9Y4K3 522 aa7.7□□□□□ -1.18
COPS3-215ENST00000578317 TNRC6BQ9UPQ9 1833 aaKnown RBP7.7□□□□□ -1.18
COPS3-215ENST00000578317 ZNF292O60281 2723 aa7.69□□□□□ -1.18
COPS3-215ENST00000578317 IGHV1OR21-1A0A087WYE8 117 aa7.69□□□□□ -1.18
COPS3-215ENST00000578317 IGKV1-8A0A0C4DH67 115 aa7.69□□□□□ -1.18
COPS3-215ENST00000578317 A0A1B0GTL3 188 aa7.69□□□□□ -1.18
COPS3-215ENST00000578317 PRAMEF27A3QJZ7 478 aa7.69□□□□□ -1.18
COPS3-215ENST00000578317 H0YIV9 168 aa7.69□□□□□ -1.18
COPS3-215ENST00000578317 HGSO14964 777 aaPredicted RBP7.69□□□□□ -1.18
COPS3-215ENST00000578317 AZIN1O14977 448 aa7.69□□□□□ -1.18
COPS3-215ENST00000578317 HDAC3O15379 428 aa7.69□□□□□ -1.18
COPS3-215ENST00000578317 CBFA2T3O75081 653 aa7.69□□□□□ -1.18
COPS3-215ENST00000578317 LYPLA1O75608 230 aaPredicted RBP7.69□□□□□ -1.18
COPS3-215ENST00000578317 GP1BAP07359 652 aa7.69□□□□□ -1.18
COPS3-215ENST00000578317 UROSP10746 265 aa7.69□□□□□ -1.18
COPS3-215ENST00000578317 CKMT2P17540 419 aa7.69□□□□□ -1.18
COPS3-215ENST00000578317 TSPAN8P19075 237 aa7.69□□□□□ -1.18
COPS3-215ENST00000578317 POLR2CP19387 275 aaPredicted RBP7.69□□□□□ -1.18
COPS3-215ENST00000578317 ACP1P24666 158 aa7.69□□□□□ -1.18
COPS3-215ENST00000578317 CD1CP29017 333 aa7.69□□□□□ -1.18
COPS3-215ENST00000578317 CMPK1P30085 196 aa7.69□□□□□ -1.18
COPS3-215ENST00000578317 CCR10P46092 362 aa7.69□□□□□ -1.18
COPS3-215ENST00000578317 CAPZBP47756 277 aa7.69□□□□□ -1.18
COPS3-215ENST00000578317 CCR8P51685 355 aa7.69□□□□□ -1.18
COPS3-215ENST00000578317 CHIT1Q13231 466 aa7.69□□□□□ -1.18
COPS3-215ENST00000578317 DOC2AQ14183 400 aa7.69□□□□□ -1.18
COPS3-215ENST00000578317 PAGE2BQ5JRK9 111 aa7.69□□□□□ -1.18
COPS3-215ENST00000578317 CDCP2Q5VXM1 449 aa7.69□□□□□ -1.18
COPS3-215ENST00000578317 MRM1Q6IN84 353 aaKnown RBP7.69□□□□□ -1.18
COPS3-215ENST00000578317 ZNF425Q6IV72 752 aa7.69□□□□□ -1.18
COPS3-215ENST00000578317 LETMD1Q6P1Q0 360 aa7.69□□□□□ -1.18
COPS3-215ENST00000578317 WDR74Q6RFH5 385 aaPredicted RBP7.69□□□□□ -1.18
COPS3-215ENST00000578317 PRR23CQ6ZRP0 262 aa7.69□□□□□ -1.18
COPS3-215ENST00000578317 SPATC1Q76KD6 591 aa7.69□□□□□ -1.18
COPS3-215ENST00000578317 EFL1Q7Z2Z2 1120 aaKnown RBP7.69□□□□□ -1.18
COPS3-215ENST00000578317 SYVN1Q86TM6 617 aa7.69□□□□□ -1.18
COPS3-215ENST00000578317 WDR75Q8IWA0 830 aaKnown RBP7.69□□□□□ -1.18
COPS3-215ENST00000578317 LRRC34Q8IZ02 419 aa7.69□□□□□ -1.18
COPS3-215ENST00000578317 C2orf73Q8N5S3 287 aaPredicted RBP7.69□□□□□ -1.18
COPS3-215ENST00000578317 ZNF781Q8N8C0 355 aa7.69□□□□□ -1.18
COPS3-215ENST00000578317 SNX31Q8N9S9 440 aa7.69□□□□□ -1.18
COPS3-215ENST00000578317 OR10G6Q8NH81 332 aa7.69□□□□□ -1.18
COPS3-215ENST00000578317 STON2Q8WXE9 905 aa7.69□□□□□ -1.18
COPS3-215ENST00000578317 UBE2E3Q969T4 207 aa7.69□□□□□ -1.18
COPS3-215ENST00000578317 PTCD3Q96EY7 689 aaKnown RBP7.69□□□□□ -1.18
COPS3-215ENST00000578317 WDR89Q96FK6 387 aaPredicted RBP7.69□□□□□ -1.18
COPS3-215ENST00000578317 ZDHHC12Q96GR4 267 aa7.69□□□□□ -1.18
COPS3-215ENST00000578317 DPYSL5Q9BPU6 564 aa7.69□□□□□ -1.18
COPS3-215ENST00000578317 SIKE1Q9BRV8 207 aa7.69□□□□□ -1.18
COPS3-215ENST00000578317 EFCAB11Q9BUY7 163 aa7.69□□□□□ -1.18
COPS3-215ENST00000578317 EDEM2Q9BV94 578 aa7.69□□□□□ -1.18
COPS3-215ENST00000578317 SLC29A3Q9BZD2 475 aa7.69□□□□□ -1.18
COPS3-215ENST00000578317 ACTR8Q9H981 624 aa7.69□□□□□ -1.18
COPS3-215ENST00000578317 PELI2Q9HAT8 420 aa7.69□□□□□ -1.18
COPS3-215ENST00000578317 ACSS2Q9NR19 701 aa7.69□□□□□ -1.18
COPS3-215ENST00000578317 C1GALT1Q9NS00 363 aa7.69□□□□□ -1.18
COPS3-215ENST00000578317 RXFP3Q9NSD7 469 aa7.69□□□□□ -1.18
COPS3-215ENST00000578317 TMEM184CQ9NVA4 438 aa7.69□□□□□ -1.18
COPS3-215ENST00000578317 KCNK4Q9NYG8 393 aa7.69□□□□□ -1.18
COPS3-215ENST00000578317 PDP2Q9P2J9 529 aa7.69□□□□□ -1.18
COPS3-215ENST00000578317 ANKMY1Q9P2S6 941 aa7.69□□□□□ -1.18
COPS3-215ENST00000578317 POMT2Q9UKY4 750 aa7.69□□□□□ -1.18
COPS3-215ENST00000578317 RNF11Q9Y3C5 154 aa7.69□□□□□ -1.18
COPS3-215ENST00000578317 CEP192Q8TEP8 1941 aa7.69□□□□□ -1.18
COPS3-215ENST00000578317 DMXL1Q9Y485 3027 aa7.69□□□□□ -1.18
COPS3-215ENST00000578317 PCDH15Q96QU1 1955 aa7.68□□□□□ -1.18
COPS3-215ENST00000578317 KCNE1BA0A087WTH5 132 aa7.68□□□□□ -1.18
COPS3-215ENST00000578317 ISM1B1AKI9 464 aa7.68□□□□□ -1.18
COPS3-215ENST00000578317 E7EQ34 232 aa7.68□□□□□ -1.18
COPS3-215ENST00000578317 ZNF195O14628 629 aa7.68□□□□□ -1.18
COPS3-215ENST00000578317 TOX3O15405 576 aaPredicted RBP7.68□□□□□ -1.18
COPS3-215ENST00000578317 LDOC1O95751 146 aaPredicted RBP7.68□□□□□ -1.18
COPS3-215ENST00000578317 HGFP14210 728 aa7.68□□□□□ -1.18
COPS3-215ENST00000578317 JUPP14923 745 aa7.68□□□□□ -1.18
COPS3-215ENST00000578317 ALOX15P16050 662 aaPredicted RBP7.68□□□□□ -1.18
COPS3-215ENST00000578317 UGT2B7P16662 529 aa7.68□□□□□ -1.18
COPS3-215ENST00000578317 TYRP1P17643 537 aa7.68□□□□□ -1.18
COPS3-215ENST00000578317 CD22P20273 847 aa7.68□□□□□ -1.18
COPS3-215ENST00000578317 DRD4P21917 467 aa7.68□□□□□ -1.18
COPS3-215ENST00000578317 GSTM2P28161 218 aa7.68□□□□□ -1.18
COPS3-215ENST00000578317 ALDH4A1P30038 563 aa7.68□□□□□ -1.18
COPS3-215ENST00000578317 LIMK1P53667 647 aa7.68□□□□□ -1.18
COPS3-215ENST00000578317 SEC24CP53992 1094 aa7.68□□□□□ -1.18
COPS3-215ENST00000578317 OR1D5P58170 312 aa7.68□□□□□ -1.18
COPS3-215ENST00000578317 CSNK1G2P78368 415 aa7.68□□□□□ -1.18
COPS3-215ENST00000578317 ILKQ13418 452 aa7.68□□□□□ -1.18
COPS3-215ENST00000578317 RBBP7Q16576 425 aa7.68□□□□□ -1.18
COPS3-215ENST00000578317 XKR6Q5GH73 641 aa7.68□□□□□ -1.18
COPS3-215ENST00000578317 SH2D4BQ5SQS7 431 aa7.68□□□□□ -1.18
COPS3-215ENST00000578317 CATSPEREQ5SY80 951 aa7.68□□□□□ -1.18
COPS3-215ENST00000578317 KANK2Q63ZY3 851 aa7.68□□□□□ -1.18
COPS3-215ENST00000578317 GRHL2Q6ISB3 625 aa7.68□□□□□ -1.18
COPS3-215ENST00000578317 ARMC6Q6NXE6 501 aa7.68□□□□□ -1.18
COPS3-215ENST00000578317 GUSBP11Q6P575 273 aa7.68□□□□□ -1.18
COPS3-215ENST00000578317 VHLLQ6RSH7 139 aa7.68□□□□□ -1.18
COPS3-215ENST00000578317 SPESP1Q6UW49 350 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms