RNA–Protein interactions for RNA: ENST00000578187.1

CCDC57-211, Transcript of coiled-coil domain containing 57, humanhuman

TSL 2

Gene CCDC57, Length 696 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-211ENST00000578187 KLHL2O95198 593 aa12.16□□□□□ -0.46
CCDC57-211ENST00000578187 MED26O95402 600 aa12.16□□□□□ -0.46
CCDC57-211ENST00000578187 ONECUT2O95948 504 aa12.16□□□□□ -0.46
CCDC57-211ENST00000578187 CDH1P12830 882 aa12.16□□□□□ -0.46
CCDC57-211ENST00000578187 ITGAXP20702 1163 aa12.16□□□□□ -0.46
CCDC57-211ENST00000578187 TYK2P29597 1187 aa12.16□□□□□ -0.46
CCDC57-211ENST00000578187 GGT5P36269 586 aa12.16□□□□□ -0.46
CCDC57-211ENST00000578187 RPS15AP62244 130 aaKnown RBP12.16□□□□□ -0.46
CCDC57-211ENST00000578187 FAM214AQ32MH5 1076 aa12.16□□□□□ -0.46
CCDC57-211ENST00000578187 NKAIN1Q4KMZ8 207 aa12.16□□□□□ -0.46
CCDC57-211ENST00000578187 IRAK1BP1Q5VVH5 260 aa12.16□□□□□ -0.46
CCDC57-211ENST00000578187 CLEC18BQ6UXF7 455 aa12.16□□□□□ -0.46
CCDC57-211ENST00000578187 TTLL10Q6ZVT0 673 aa12.16□□□□□ -0.46
CCDC57-211ENST00000578187 VN1R4Q7Z5H5 301 aa12.16□□□□□ -0.46
CCDC57-211ENST00000578187 THOC6Q86W42 341 aaKnown RBP12.16□□□□□ -0.46
CCDC57-211ENST00000578187 PLD3Q8IV08 490 aa12.16□□□□□ -0.46
CCDC57-211ENST00000578187 ARHGEF39Q8N4T4 335 aa12.16□□□□□ -0.46
CCDC57-211ENST00000578187 CSNK1A1LQ8N752 337 aa12.16□□□□□ -0.46
CCDC57-211ENST00000578187 CLEC18CQ8NCF0 446 aa12.16□□□□□ -0.46
CCDC57-211ENST00000578187 RHEBL1Q8TAI7 183 aa12.16□□□□□ -0.46
CCDC57-211ENST00000578187 STAG3L4Q8TBR4 150 aa12.16□□□□□ -0.46
CCDC57-211ENST00000578187 SLC5A11Q8WWX8 675 aa12.16□□□□□ -0.46
CCDC57-211ENST00000578187 NEIL2Q969S2 332 aa12.16□□□□□ -0.46
CCDC57-211ENST00000578187 RERGQ96A58 199 aaPredicted RBP12.16□□□□□ -0.46
CCDC57-211ENST00000578187 NACC2Q96BF6 587 aa12.16□□□□□ -0.46
CCDC57-211ENST00000578187 NXNL1Q96CM4 212 aa12.16□□□□□ -0.46
CCDC57-211ENST00000578187 THAP11Q96EK4 314 aa12.16□□□□□ -0.46
CCDC57-211ENST00000578187 C10orf90Q96M02 699 aa12.16□□□□□ -0.46
CCDC57-211ENST00000578187 SARGQ9BW04 601 aa12.16□□□□□ -0.46
CCDC57-211ENST00000578187 ALG9Q9H6U8 611 aa12.16□□□□□ -0.46
CCDC57-211ENST00000578187 NUDT4Q9NZJ9 180 aa12.16□□□□□ -0.46
CCDC57-211ENST00000578187 RNF112Q9ULX5 631 aa12.16□□□□□ -0.46
CCDC57-211ENST00000578187 MAP4K5Q9Y4K4 846 aa12.16□□□□□ -0.46
CCDC57-211ENST00000578187 NCF1BA6NI72 391 aaPredicted RBP12.15□□□□□ -0.46
CCDC57-211ENST00000578187 NCF1CA8MVU1 366 aaPredicted RBP12.15□□□□□ -0.46
CCDC57-211ENST00000578187 TRIM49D1C9J1S8 452 aa12.15□□□□□ -0.46
CCDC57-211ENST00000578187 TAPBPO15533 448 aa12.15□□□□□ -0.46
CCDC57-211ENST00000578187 P2RX6O15547 441 aa12.15□□□□□ -0.46
CCDC57-211ENST00000578187 WDR47O94967 919 aa12.15□□□□□ -0.46
CCDC57-211ENST00000578187 NCF1P14598 390 aaPredicted RBP12.15□□□□□ -0.46
CCDC57-211ENST00000578187 GNLYP22749 145 aa12.15□□□□□ -0.46
CCDC57-211ENST00000578187 KCNC1P48547 511 aa12.15□□□□□ -0.46
CCDC57-211ENST00000578187 CCR8P51685 355 aa12.15□□□□□ -0.46
CCDC57-211ENST00000578187 VSNL1P62760 191 aa12.15□□□□□ -0.46
CCDC57-211ENST00000578187 RAPSNQ13702 412 aa12.15□□□□□ -0.46
CCDC57-211ENST00000578187 SLC29A2Q14542 456 aa12.15□□□□□ -0.46
CCDC57-211ENST00000578187 SLC9A5Q14940 896 aa12.15□□□□□ -0.46
CCDC57-211ENST00000578187 ACAP2Q15057 778 aa12.15□□□□□ -0.46
CCDC57-211ENST00000578187 INPP5JQ15735 1006 aaPredicted RBP12.15□□□□□ -0.46
CCDC57-211ENST00000578187 FAM83EQ2M2I3 478 aa12.15□□□□□ -0.46
CCDC57-211ENST00000578187 C18orf21Q32NC0 220 aaPredicted RBP12.15□□□□□ -0.46
CCDC57-211ENST00000578187 DCAF10Q5QP82 559 aa12.15□□□□□ -0.46
CCDC57-211ENST00000578187 GARNL3Q5VVW2 1013 aa12.15□□□□□ -0.46
CCDC57-211ENST00000578187 SLC6A19Q695T7 634 aa12.15□□□□□ -0.46
CCDC57-211ENST00000578187 SULT1C3Q6IMI6 304 aa12.15□□□□□ -0.46
CCDC57-211ENST00000578187 ADGRD1Q6QNK2 874 aa12.15□□□□□ -0.46
CCDC57-211ENST00000578187 IQCKQ8N0W5 287 aa12.15□□□□□ -0.46
CCDC57-211ENST00000578187 GALNT16Q8N428 558 aa12.15□□□□□ -0.46
CCDC57-211ENST00000578187 FKBP10Q96AY3 582 aa12.15□□□□□ -0.46
CCDC57-211ENST00000578187 GPR78Q96P69 363 aa12.15□□□□□ -0.46
CCDC57-211ENST00000578187 ILKAPQ9H0C8 392 aaPredicted RBP12.15□□□□□ -0.46
CCDC57-211ENST00000578187 CNOT10Q9H9A5 744 aaKnown RBP12.15□□□□□ -0.46
CCDC57-211ENST00000578187 PELI2Q9HAT8 420 aa12.15□□□□□ -0.46
CCDC57-211ENST00000578187 ATP13A2Q9NQ11 1180 aa12.15□□□□□ -0.46
CCDC57-211ENST00000578187 SLC22A11Q9NSA0 550 aa12.15□□□□□ -0.46
CCDC57-211ENST00000578187 P4HTMQ9NXG6 502 aa12.15□□□□□ -0.46
CCDC57-211ENST00000578187 WWOXQ9NZC7 414 aa12.15□□□□□ -0.46
CCDC57-211ENST00000578187 PTBP2Q9UKA9 531 aaKnown RBP12.15□□□□□ -0.46
CCDC57-211ENST00000578187 NXT1Q9UKK6 140 aaKnown RBP12.15□□□□□ -0.46
CCDC57-211ENST00000578187 RUVBL1Q9Y265 456 aaKnown RBP12.15□□□□□ -0.46
CCDC57-211ENST00000578187 SLC22A14Q9Y267 594 aa12.15□□□□□ -0.46
CCDC57-211ENST00000578187 DYRK1BQ9Y463 629 aa12.15□□□□□ -0.46
CCDC57-211ENST00000578187 TNRC6AQ8NDV7 1962 aaKnown RBP12.15□□□□□ -0.46
CCDC57-211ENST00000578187 PCSK5Q92824 1860 aa12.14□□□□□ -0.47
CCDC57-211ENST00000578187 TRBC2A0A5B9 178 aa12.14□□□□□ -0.47
CCDC57-211ENST00000578187 FEZF1A0PJY2 475 aa12.14□□□□□ -0.47
CCDC57-211ENST00000578187 BLACEA4D250 179 aa12.14□□□□□ -0.47
CCDC57-211ENST00000578187 UBXN8O00124 270 aa12.14□□□□□ -0.47
CCDC57-211ENST00000578187 TXNDC9O14530 226 aa12.14□□□□□ -0.47
CCDC57-211ENST00000578187 ALBP02768 609 aa12.14□□□□□ -0.47
CCDC57-211ENST00000578187 EIF2S1P05198 315 aaKnown RBP12.14□□□□□ -0.47
CCDC57-211ENST00000578187 SNRPAP09012 282 aaKnown RBP12.14□□□□□ -0.47
CCDC57-211ENST00000578187 MTHFD2P13995 350 aa12.14□□□□□ -0.47
CCDC57-211ENST00000578187 GRK3P35626 688 aa12.14□□□□□ -0.47
CCDC57-211ENST00000578187 BCL6P41182 706 aa12.14□□□□□ -0.47
CCDC57-211ENST00000578187 GDF5P43026 501 aa12.14□□□□□ -0.47
CCDC57-211ENST00000578187 UQCRFS1P47985 274 aa12.14□□□□□ -0.47
CCDC57-211ENST00000578187 REEP5Q00765 189 aa12.14□□□□□ -0.47
CCDC57-211ENST00000578187 AIMP2Q13155 320 aaKnown RBP12.14□□□□□ -0.47
CCDC57-211ENST00000578187 MYBPC3Q14896 1274 aa12.14□□□□□ -0.47
CCDC57-211ENST00000578187 MUM1Q2TAK8 710 aa12.14□□□□□ -0.47
CCDC57-211ENST00000578187 HKDC1Q2TB90 917 aa12.14□□□□□ -0.47
CCDC57-211ENST00000578187 TECRLQ5HYJ1 363 aa12.14□□□□□ -0.47
CCDC57-211ENST00000578187 CATSPEREQ5SY80 951 aa12.14□□□□□ -0.47
CCDC57-211ENST00000578187 MRPL14Q6P1L8 145 aaKnown RBP12.14□□□□□ -0.47
CCDC57-211ENST00000578187 COX15Q7KZN9 410 aa12.14□□□□□ -0.47
CCDC57-211ENST00000578187 TMPRSS11BQ86T26 416 aa12.14□□□□□ -0.47
CCDC57-211ENST00000578187 CNPY4Q8N129 248 aa12.14□□□□□ -0.47
CCDC57-211ENST00000578187 PLD6Q8N2A8 252 aaKnown RBP12.14□□□□□ -0.47
CCDC57-211ENST00000578187 ZADH2Q8N4Q0 377 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms