RNA–Protein interactions for RNA: ENST00000577824.5

MKS1-206, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 1,158 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-206ENST00000577824 SLC35G6P0C7Q6 338 aa12.12□□□□□ -0.47
MKS1-206ENST00000577824 TSPAN8P19075 237 aa12.12□□□□□ -0.47
MKS1-206ENST00000577824 PIK3CBP42338 1070 aa12.12□□□□□ -0.47
MKS1-206ENST00000577824 VSX2P58304 361 aaPredicted RBP12.12□□□□□ -0.47
MKS1-206ENST00000577824 FOXM1Q08050 763 aa12.12□□□□□ -0.47
MKS1-206ENST00000577824 HYAL2Q12891 473 aa12.12□□□□□ -0.47
MKS1-206ENST00000577824 CHI3L2Q15782 390 aa12.12□□□□□ -0.47
MKS1-206ENST00000577824 RBBP7Q16576 425 aa12.12□□□□□ -0.47
MKS1-206ENST00000577824 HIST2H2ACQ16777 129 aaPredicted RBP12.12□□□□□ -0.47
MKS1-206ENST00000577824 DCAF12Q5T6F0 453 aa12.12□□□□□ -0.47
MKS1-206ENST00000577824 YOD1Q5VVQ6 348 aaPredicted RBP12.12□□□□□ -0.47
MKS1-206ENST00000577824 GARNL3Q5VVW2 1013 aa12.12□□□□□ -0.47
MKS1-206ENST00000577824 HIST2H2AA3Q6FI13 130 aa12.12□□□□□ -0.47
MKS1-206ENST00000577824 ATG14Q6ZNE5 492 aa12.12□□□□□ -0.47
MKS1-206ENST00000577824 MILR1Q7Z6M3 343 aa12.12□□□□□ -0.47
MKS1-206ENST00000577824 ASPGQ86U10 573 aa12.12□□□□□ -0.47
MKS1-206ENST00000577824 ZNF655Q8N720 491 aaPredicted RBP12.12□□□□□ -0.47
MKS1-206ENST00000577824 CAMKVQ8NCB2 501 aa12.12□□□□□ -0.47
MKS1-206ENST00000577824 MDM1Q8TC05 714 aa12.12□□□□□ -0.47
MKS1-206ENST00000577824 MGARPQ8TDB4 240 aa12.12□□□□□ -0.47
MKS1-206ENST00000577824 RERGQ96A58 199 aaPredicted RBP12.12□□□□□ -0.47
MKS1-206ENST00000577824 REPS1Q96D71 796 aa12.12□□□□□ -0.47
MKS1-206ENST00000577824 LRFN5Q96NI6 719 aa12.12□□□□□ -0.47
MKS1-206ENST00000577824 CDK15Q96Q40 435 aa12.12□□□□□ -0.47
MKS1-206ENST00000577824 SPRY4Q9C004 299 aa12.12□□□□□ -0.47
MKS1-206ENST00000577824 SLC6A16Q9GZN6 736 aa12.12□□□□□ -0.47
MKS1-206ENST00000577824 MLXIPLQ9NP71 852 aa12.12□□□□□ -0.47
MKS1-206ENST00000577824 ACSS2Q9NR19 701 aa12.12□□□□□ -0.47
MKS1-206ENST00000577824 PSD3Q9NYI0 1048 aa12.12□□□□□ -0.47
MKS1-206ENST00000577824 DKK4Q9UBT3 224 aa12.12□□□□□ -0.47
MKS1-206ENST00000577824 SERTAD3Q9UJW9 196 aa12.12□□□□□ -0.47
MKS1-206ENST00000577824 SRPK3Q9UPE1 567 aa12.12□□□□□ -0.47
MKS1-206ENST00000577824 RNF11Q9Y3C5 154 aa12.12□□□□□ -0.47
MKS1-206ENST00000577824 TMEM184BQ9Y519 407 aaPredicted RBP12.12□□□□□ -0.47
MKS1-206ENST00000577824 B3GALT1Q9Y5Z6 326 aa12.12□□□□□ -0.47
MKS1-206ENST00000577824 SERTM1A2A2V5 107 aa12.11□□□□□ -0.47
MKS1-206ENST00000577824 FOXE1O00358 373 aaPredicted RBP12.11□□□□□ -0.47
MKS1-206ENST00000577824 OR2B3O76000 313 aa12.11□□□□□ -0.47
MKS1-206ENST00000577824 OR4F21O95013 312 aa12.11□□□□□ -0.47
MKS1-206ENST00000577824 DLGAP3O95886 979 aa12.11□□□□□ -0.47
MKS1-206ENST00000577824 CHRNGP07510 517 aa12.11□□□□□ -0.47
MKS1-206ENST00000577824 SERPINA6P08185 405 aa12.11□□□□□ -0.47
MKS1-206ENST00000577824 FGF4P08620 206 aa12.11□□□□□ -0.47
MKS1-206ENST00000577824 CHN1P15882 459 aa12.11□□□□□ -0.47
MKS1-206ENST00000577824 BGNP21810 368 aa12.11□□□□□ -0.47
MKS1-206ENST00000577824 CD82P27701 267 aa12.11□□□□□ -0.47
MKS1-206ENST00000577824 CCR10P46092 362 aa12.11□□□□□ -0.47
MKS1-206ENST00000577824 GRM7Q14831 915 aa12.11□□□□□ -0.47
MKS1-206ENST00000577824 ZRSR2Q15696 482 aaKnown RBP12.11□□□□□ -0.47
MKS1-206ENST00000577824 HKDC1Q2TB90 917 aa12.11□□□□□ -0.47
MKS1-206ENST00000577824 ARL13AQ5H913 290 aaPredicted RBP12.11□□□□□ -0.47
MKS1-206ENST00000577824 FRG2Q64ET8 278 aa12.11□□□□□ -0.47
MKS1-206ENST00000577824 ADNP2Q6IQ32 1131 aa12.11□□□□□ -0.47
MKS1-206ENST00000577824 RHBDD2Q6NTF9 364 aa12.11□□□□□ -0.47
MKS1-206ENST00000577824 PWWP2BQ6NUJ5 590 aa12.11□□□□□ -0.47
MKS1-206ENST00000577824 TMEM214Q6NUQ4 689 aaKnown RBP12.11□□□□□ -0.47
MKS1-206ENST00000577824 CUZD1Q86UP6 607 aa12.11□□□□□ -0.47
MKS1-206ENST00000577824 TRIM42Q8IWZ5 723 aa12.11□□□□□ -0.47
MKS1-206ENST00000577824 GPR135Q8IZ08 494 aa12.11□□□□□ -0.47
MKS1-206ENST00000577824 ARFGAP2Q8N6H7 521 aa12.11□□□□□ -0.47
MKS1-206ENST00000577824 CSNK1A1LQ8N752 337 aa12.11□□□□□ -0.47
MKS1-206ENST00000577824 ZNF473Q8WTR7 871 aaKnown RBP12.11□□□□□ -0.47
MKS1-206ENST00000577824 N4BP2L2Q92802 583 aaPredicted RBP12.11□□□□□ -0.47
MKS1-206ENST00000577824 USP7Q93009 1102 aa12.11□□□□□ -0.47
MKS1-206ENST00000577824 ATP6V1E2Q96A05 226 aa12.11□□□□□ -0.47
MKS1-206ENST00000577824 MVB12AQ96EY5 273 aa12.11□□□□□ -0.47
MKS1-206ENST00000577824 C10orf90Q96M02 699 aa12.11□□□□□ -0.47
MKS1-206ENST00000577824 FRG2BQ96QU4 278 aa12.11□□□□□ -0.47
MKS1-206ENST00000577824 SORT1Q99523 831 aa12.11□□□□□ -0.47
MKS1-206ENST00000577824 TMEM121BQ9BXQ6 578 aaPredicted RBP12.11□□□□□ -0.47
MKS1-206ENST00000577824 EML4Q9HC35 981 aaKnown RBP12.11□□□□□ -0.47
MKS1-206ENST00000577824 TNFRSF12AQ9NP84 129 aa12.11□□□□□ -0.47
MKS1-206ENST00000577824 RUVBL1Q9Y265 456 aaKnown RBP12.11□□□□□ -0.47
MKS1-206ENST00000577824 LAMA5O15230 3695 aa12.11□□□□□ -0.47
MKS1-206ENST00000577824 KIF26BQ2KJY2 2108 aa12.1□□□□□ -0.47
MKS1-206ENST00000577824 SPTBN2O15020 2390 aa12.1□□□□□ -0.47
MKS1-206ENST00000577824 NDUFS4O43181 175 aa12.1□□□□□ -0.47
MKS1-206ENST00000577824 CPNE3O75131 537 aaKnown RBP12.1□□□□□ -0.47
MKS1-206ENST00000577824 SCRG1O75711 98 aa12.1□□□□□ -0.47
MKS1-206ENST00000577824 TNFSF15O95150 251 aa12.1□□□□□ -0.47
MKS1-206ENST00000577824 ONECUT2O95948 504 aa12.1□□□□□ -0.47
MKS1-206ENST00000577824 CAPN1P07384 714 aa12.1□□□□□ -0.47
MKS1-206ENST00000577824 HBQ1P09105 142 aa12.1□□□□□ -0.47
MKS1-206ENST00000577824 HSD3B1P14060 373 aa12.1□□□□□ -0.47
MKS1-206ENST00000577824 HSD3B2P26439 372 aa12.1□□□□□ -0.47
MKS1-206ENST00000577824 RORAP35398 523 aa12.1□□□□□ -0.47
MKS1-206ENST00000577824 ARFIP1P53367 373 aa12.1□□□□□ -0.47
MKS1-206ENST00000577824 MAPK10P53779 464 aa12.1□□□□□ -0.47
MKS1-206ENST00000577824 ARSFP54793 590 aa12.1□□□□□ -0.47
MKS1-206ENST00000577824 ABCE1P61221 599 aaKnown RBP12.1□□□□□ -0.47
MKS1-206ENST00000577824 OCRLQ01968 901 aa12.1□□□□□ -0.47
MKS1-206ENST00000577824 FAM53BQ14153 422 aa12.1□□□□□ -0.47
MKS1-206ENST00000577824 MAP7Q14244 749 aa12.1□□□□□ -0.47
MKS1-206ENST00000577824 RBBP5Q15291 538 aaKnown RBP12.1□□□□□ -0.47
MKS1-206ENST00000577824 CPSF6Q16630 551 aaKnown RBP eCLIP12.1□□□□□ -0.47
MKS1-206ENST00000577824 WASHC2DQ5SRD0 308 aa12.1□□□□□ -0.47
MKS1-206ENST00000577824 TMEM164Q5U3C3 297 aa12.1□□□□□ -0.47
MKS1-206ENST00000577824 KANK2Q63ZY3 851 aa12.1□□□□□ -0.47
MKS1-206ENST00000577824 ZNF385CQ66K41 422 aaPredicted RBP12.1□□□□□ -0.47
MKS1-206ENST00000577824 ZNF517Q6ZMY9 492 aaPredicted RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms