RNA–Protein interactions for RNA: ENST00000577686.1

SMARCD2-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 394 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-205ENST00000577686 MDS2Q8NDY4 140 aa13.4□□□□□ -0.26
SMARCD2-205ENST00000577686 ZCCHC10Q8TBK6 192 aa13.4□□□□□ -0.26
SMARCD2-205ENST00000577686 PHF10Q8WUB8 498 aaKnown RBP13.4□□□□□ -0.26
SMARCD2-205ENST00000577686 TMEM125Q96AQ2 219 aa13.4□□□□□ -0.26
SMARCD2-205ENST00000577686 SCMH1Q96GD3 660 aa13.4□□□□□ -0.26
SMARCD2-205ENST00000577686 HIST1H2AHQ96KK5 128 aa13.4□□□□□ -0.26
SMARCD2-205ENST00000577686 HIST1H2AJQ99878 128 aa13.4□□□□□ -0.26
SMARCD2-205ENST00000577686 FAM167BQ9BTA0 163 aa13.4□□□□□ -0.26
SMARCD2-205ENST00000577686 H2AFJQ9BTM1 129 aa13.4□□□□□ -0.26
SMARCD2-205ENST00000577686 COQ3Q9NZJ6 369 aa13.4□□□□□ -0.26
SMARCD2-205ENST00000577686 TRMT6Q9UJA5 497 aaKnown RBP13.4□□□□□ -0.26
SMARCD2-205ENST00000577686 TINAGQ9UJW2 476 aa13.4□□□□□ -0.26
SMARCD2-205ENST00000577686 DHRS7Q9Y394 339 aa13.4□□□□□ -0.26
SMARCD2-205ENST00000577686 SLC22A7Q9Y694 548 aa13.4□□□□□ -0.26
SMARCD2-205ENST00000577686 CNTRLQ7Z7A1 2325 aa13.39□□□□□ -0.27
SMARCD2-205ENST00000577686 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.39□□□□□ -0.27
SMARCD2-205ENST00000577686 IGHV3-20A0A0C4DH32 117 aa13.39□□□□□ -0.27
SMARCD2-205ENST00000577686 ASPDHA6ND91 283 aa13.39□□□□□ -0.27
SMARCD2-205ENST00000577686 SDR42E2A6NKP2 422 aa13.39□□□□□ -0.27
SMARCD2-205ENST00000577686 GABRR3A8MPY1 467 aa13.39□□□□□ -0.27
SMARCD2-205ENST00000577686 NPIPA5E9PKD4 350 aa13.39□□□□□ -0.27
SMARCD2-205ENST00000577686 SGK494L7N484 410 aa13.39□□□□□ -0.27
SMARCD2-205ENST00000577686 NDC80O14777 642 aa13.39□□□□□ -0.27
SMARCD2-205ENST00000577686 FGGP02679 453 aa13.39□□□□□ -0.27
SMARCD2-205ENST00000577686 ZNF24P17028 368 aa13.39□□□□□ -0.27
SMARCD2-205ENST00000577686 IMPA1P29218 277 aa13.39□□□□□ -0.27
SMARCD2-205ENST00000577686 OR4D2P58180 307 aa13.39□□□□□ -0.27
SMARCD2-205ENST00000577686 CUL1Q13616 776 aa13.39□□□□□ -0.27
SMARCD2-205ENST00000577686 ABRAXAS2Q15018 415 aa13.39□□□□□ -0.27
SMARCD2-205ENST00000577686 FCRLBQ6BAA4 426 aa13.39□□□□□ -0.27
SMARCD2-205ENST00000577686 SLC25A25Q6KCM7 469 aa13.39□□□□□ -0.27
SMARCD2-205ENST00000577686 TMEM139Q8IV31 216 aa13.39□□□□□ -0.27
SMARCD2-205ENST00000577686 CEP97Q8IW35 865 aa13.39□□□□□ -0.27
SMARCD2-205ENST00000577686 MYO1HQ8N1T3 1032 aa13.39□□□□□ -0.27
SMARCD2-205ENST00000577686 POGLUT1Q8NBL1 392 aa13.39□□□□□ -0.27
SMARCD2-205ENST00000577686 PLPP5Q8NEB5 264 aa13.39□□□□□ -0.27
SMARCD2-205ENST00000577686 SLC13A3Q8WWT9 602 aa13.39□□□□□ -0.27
SMARCD2-205ENST00000577686 HAUS8Q9BT25 410 aa13.39□□□□□ -0.27
SMARCD2-205ENST00000577686 LRFN1Q9P244 771 aa13.39□□□□□ -0.27
SMARCD2-205ENST00000577686 ITGB1BP2Q9UKP3 347 aa13.39□□□□□ -0.27
SMARCD2-205ENST00000577686 NPIPA1Q9UND3 350 aa13.39□□□□□ -0.27
SMARCD2-205ENST00000577686 ZNF835Q9Y2P0 537 aa13.39□□□□□ -0.27
SMARCD2-205ENST00000577686 MEMO1Q9Y316 297 aa13.39□□□□□ -0.27
SMARCD2-205ENST00000577686 ZGRF1Q86YA3 2104 aa13.39□□□□□ -0.27
SMARCD2-205ENST00000577686 MDC1Q14676 2089 aaKnown RBP13.38□□□□□ -0.27
SMARCD2-205ENST00000577686 SVILO95425 2214 aa13.38□□□□□ -0.27
SMARCD2-205ENST00000577686 FCHO1O14526 889 aa13.38□□□□□ -0.27
SMARCD2-205ENST00000577686 SLC16A5O15375 505 aa13.38□□□□□ -0.27
SMARCD2-205ENST00000577686 ASNA1O43681 348 aa13.38□□□□□ -0.27
SMARCD2-205ENST00000577686 SP1P08047 785 aa13.38□□□□□ -0.27
SMARCD2-205ENST00000577686 POU3F2P20265 443 aaPredicted RBP13.38□□□□□ -0.27
SMARCD2-205ENST00000577686 CD96P40200 585 aa13.38□□□□□ -0.27
SMARCD2-205ENST00000577686 ADORA2A-AS1P86434 159 aa13.38□□□□□ -0.27
SMARCD2-205ENST00000577686 MPP1Q00013 466 aa13.38□□□□□ -0.27
SMARCD2-205ENST00000577686 GPS1Q13098 491 aa13.38□□□□□ -0.27
SMARCD2-205ENST00000577686 USP10Q14694 798 aaKnown RBP13.38□□□□□ -0.27
SMARCD2-205ENST00000577686 CAPN13Q6MZZ7 669 aaPredicted RBP13.38□□□□□ -0.27
SMARCD2-205ENST00000577686 GALNTL5Q7Z4T8 443 aa13.38□□□□□ -0.27
SMARCD2-205ENST00000577686 VN1R4Q7Z5H5 301 aa13.38□□□□□ -0.27
SMARCD2-205ENST00000577686 ARMC2Q8NEN0 867 aa13.38□□□□□ -0.27
SMARCD2-205ENST00000577686 CA5BP1Q8WTZ4 195 aa13.38□□□□□ -0.27
SMARCD2-205ENST00000577686 C14orf79Q96F83 325 aa13.38□□□□□ -0.27
SMARCD2-205ENST00000577686 FRMD6Q96NE9 622 aa13.38□□□□□ -0.27
SMARCD2-205ENST00000577686 SIGLEC12Q96PQ1 595 aa13.38□□□□□ -0.27
SMARCD2-205ENST00000577686 GPR21Q99679 349 aa13.38□□□□□ -0.27
SMARCD2-205ENST00000577686 OLFM1Q99784 485 aa13.38□□□□□ -0.27
SMARCD2-205ENST00000577686 SPOCK3Q9BQ16 436 aa13.38□□□□□ -0.27
SMARCD2-205ENST00000577686 TRIM54Q9BYV2 358 aa13.38□□□□□ -0.27
SMARCD2-205ENST00000577686 TRIM8Q9BZR9 551 aa13.38□□□□□ -0.27
SMARCD2-205ENST00000577686 CLK4Q9HAZ1 481 aaKnown RBP13.38□□□□□ -0.27
SMARCD2-205ENST00000577686 FBXO6Q9NRD1 293 aaPredicted RBP13.38□□□□□ -0.27
SMARCD2-205ENST00000577686 C20orf96Q9NUD7 363 aaPredicted RBP13.38□□□□□ -0.27
SMARCD2-205ENST00000577686 GALPQ9UBC7 116 aa13.38□□□□□ -0.27
SMARCD2-205ENST00000577686 CPAMD8Q8IZJ3 1885 aa13.38□□□□□ -0.27
SMARCD2-205ENST00000577686 URADA6NGE7 173 aa13.37□□□□□ -0.27
SMARCD2-205ENST00000577686 E9PLN8 166 aa13.37□□□□□ -0.27
SMARCD2-205ENST00000577686 PSMD12O00232 456 aaPredicted RBP13.37□□□□□ -0.27
SMARCD2-205ENST00000577686 RDH16O75452 317 aa13.37□□□□□ -0.27
SMARCD2-205ENST00000577686 SLC25A12O75746 678 aa13.37□□□□□ -0.27
SMARCD2-205ENST00000577686 STATHP02808 62 aa13.37□□□□□ -0.27
SMARCD2-205ENST00000577686 CDC25BP30305 580 aa13.37□□□□□ -0.27
SMARCD2-205ENST00000577686 MAGEA6P43360 314 aa13.37□□□□□ -0.27
SMARCD2-205ENST00000577686 CYB561P49447 251 aa13.37□□□□□ -0.27
SMARCD2-205ENST00000577686 CCR8P51685 355 aa13.37□□□□□ -0.27
SMARCD2-205ENST00000577686 SLC26A5P58743 744 aa13.37□□□□□ -0.27
SMARCD2-205ENST00000577686 CSNK1G2P78368 415 aa13.37□□□□□ -0.27
SMARCD2-205ENST00000577686 RGS1Q08116 209 aa13.37□□□□□ -0.27
SMARCD2-205ENST00000577686 SIX1Q15475 284 aaPredicted RBP13.37□□□□□ -0.27
SMARCD2-205ENST00000577686 MAPKAPK3Q16644 382 aa13.37□□□□□ -0.27
SMARCD2-205ENST00000577686 LCTLQ6UWM7 567 aa13.37□□□□□ -0.27
SMARCD2-205ENST00000577686 ABHD13Q7L211 337 aa13.37□□□□□ -0.27
SMARCD2-205ENST00000577686 RPS19BP1Q86WX3 136 aaKnown RBP13.37□□□□□ -0.27
SMARCD2-205ENST00000577686 LRRC56Q8IYG6 542 aaPredicted RBP13.37□□□□□ -0.27
SMARCD2-205ENST00000577686 CPNE9Q8IYJ1 553 aa13.37□□□□□ -0.27
SMARCD2-205ENST00000577686 MFSD9Q8NBP5 474 aa13.37□□□□□ -0.27
SMARCD2-205ENST00000577686 TRIM58Q8NG06 486 aa13.37□□□□□ -0.27
SMARCD2-205ENST00000577686 GIMAP7Q8NHV1 300 aa13.37□□□□□ -0.27
SMARCD2-205ENST00000577686 CD200R1Q8TD46 325 aa13.37□□□□□ -0.27
SMARCD2-205ENST00000577686 ALKBH8Q96BT7 664 aaKnown RBP13.37□□□□□ -0.27
SMARCD2-205ENST00000577686 TBC1D20Q96BZ9 403 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms