RNA–Protein interactions for RNA: ENST00000575560.5

CALCOCO2-227, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 5

Gene CALCOCO2, Length 540 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-227ENST00000575560 RNF6Q9Y252 685 aa9.37□□□□□ -0.91
CALCOCO2-227ENST00000575560 FBN3Q75N90 2809 aa9.37□□□□□ -0.91
CALCOCO2-227ENST00000575560 A0A1B0GTH9 108 aa9.36□□□□□ -0.91
CALCOCO2-227ENST00000575560 NKX2-6A6NCS4 301 aa9.36□□□□□ -0.91
CALCOCO2-227ENST00000575560 ZNF839A8K0R7 811 aa9.36□□□□□ -0.91
CALCOCO2-227ENST00000575560 BTNL10A8MVZ5 291 aa9.36□□□□□ -0.91
CALCOCO2-227ENST00000575560 H7BY64 318 aa9.36□□□□□ -0.91
CALCOCO2-227ENST00000575560 SGK494L7N484 410 aa9.36□□□□□ -0.91
CALCOCO2-227ENST00000575560 NDC80O14777 642 aa9.36□□□□□ -0.91
CALCOCO2-227ENST00000575560 KIF5CO60282 957 aa9.36□□□□□ -0.91
CALCOCO2-227ENST00000575560 NIPSNAP2O75323 286 aa9.36□□□□□ -0.91
CALCOCO2-227ENST00000575560 STATHP02808 62 aa9.36□□□□□ -0.91
CALCOCO2-227ENST00000575560 ARNTP27540 789 aa9.36□□□□□ -0.91
CALCOCO2-227ENST00000575560 TPP2P29144 1249 aaPredicted RBP9.36□□□□□ -0.91
CALCOCO2-227ENST00000575560 FMO4P31512 558 aa9.36□□□□□ -0.91
CALCOCO2-227ENST00000575560 TRHRP34981 398 aaPredicted RBP9.36□□□□□ -0.91
CALCOCO2-227ENST00000575560 SLC26A5P58743 744 aa9.36□□□□□ -0.91
CALCOCO2-227ENST00000575560 MPP1Q00013 466 aa9.36□□□□□ -0.91
CALCOCO2-227ENST00000575560 ACTN3Q08043 901 aaPredicted RBP9.36□□□□□ -0.91
CALCOCO2-227ENST00000575560 TSTA3Q13630 321 aaPredicted RBP9.36□□□□□ -0.91
CALCOCO2-227ENST00000575560 USP10Q14694 798 aaKnown RBP9.36□□□□□ -0.91
CALCOCO2-227ENST00000575560 ABRAXAS2Q15018 415 aa9.36□□□□□ -0.91
CALCOCO2-227ENST00000575560 OASLQ15646 514 aaKnown RBP9.36□□□□□ -0.91
CALCOCO2-227ENST00000575560 KLHL38Q2WGJ6 581 aa9.36□□□□□ -0.91
CALCOCO2-227ENST00000575560 ACSBG2Q5FVE4 666 aa9.36□□□□□ -0.91
CALCOCO2-227ENST00000575560 CES4AQ5XG92 561 aa9.36□□□□□ -0.91
CALCOCO2-227ENST00000575560 CD163Q86VB7 1156 aa9.36□□□□□ -0.91
CALCOCO2-227ENST00000575560 PDSS2Q86YH6 399 aa9.36□□□□□ -0.91
CALCOCO2-227ENST00000575560 POGLUT1Q8NBL1 392 aa9.36□□□□□ -0.91
CALCOCO2-227ENST00000575560 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.36□□□□□ -0.91
CALCOCO2-227ENST00000575560 FBXO15Q8NCQ5 510 aaPredicted RBP9.36□□□□□ -0.91
CALCOCO2-227ENST00000575560 PPHLN1Q8NEY8 458 aaKnown RBP9.36□□□□□ -0.91
CALCOCO2-227ENST00000575560 C16orf52Q8NHV5 167 aa9.36□□□□□ -0.91
CALCOCO2-227ENST00000575560 LPGAT1Q92604 370 aa9.36□□□□□ -0.91
CALCOCO2-227ENST00000575560 FAM136AQ96C01 138 aa9.36□□□□□ -0.91
CALCOCO2-227ENST00000575560 PRAP1Q96NZ9 151 aa9.36□□□□□ -0.91
CALCOCO2-227ENST00000575560 MACROD1Q9BQ69 325 aa9.36□□□□□ -0.91
CALCOCO2-227ENST00000575560 ZNF559Q9BR84 538 aa9.36□□□□□ -0.91
CALCOCO2-227ENST00000575560 KCNJ16Q9NPI9 418 aa9.36□□□□□ -0.91
CALCOCO2-227ENST00000575560 PLSCR2Q9NRY7 297 aa9.36□□□□□ -0.91
CALCOCO2-227ENST00000575560 TMEM184CQ9NVA4 438 aa9.36□□□□□ -0.91
CALCOCO2-227ENST00000575560 TSR3Q9UJK0 312 aaKnown RBP9.36□□□□□ -0.91
CALCOCO2-227ENST00000575560 BOLA1Q9Y3E2 137 aa9.36□□□□□ -0.91
CALCOCO2-227ENST00000575560 HCFC1P51610 2035 aa9.36□□□□□ -0.91
CALCOCO2-227ENST00000575560 INTS1Q8N201 2190 aaKnown RBP9.36□□□□□ -0.91
CALCOCO2-227ENST00000575560 GRID2IPA4D2P6 1211 aa9.35□□□□□ -0.91
CALCOCO2-227ENST00000575560 MAGEB17A8MXT2 336 aa9.35□□□□□ -0.91
CALCOCO2-227ENST00000575560 E7EVH7 732 aa9.35□□□□□ -0.91
CALCOCO2-227ENST00000575560 H3BMM5 538 aa9.35□□□□□ -0.91
CALCOCO2-227ENST00000575560 GFYI3L273 518 aa9.35□□□□□ -0.91
CALCOCO2-227ENST00000575560 SMAPO00193 183 aa9.35□□□□□ -0.91
CALCOCO2-227ENST00000575560 ESR1P03372 595 aa9.35□□□□□ -0.91
CALCOCO2-227ENST00000575560 CATP04040 527 aaKnown RBP9.35□□□□□ -0.91
CALCOCO2-227ENST00000575560 PTMAP06454 111 aaKnown RBP9.35□□□□□ -0.91
CALCOCO2-227ENST00000575560 IL1RNP18510 177 aa9.35□□□□□ -0.91
CALCOCO2-227ENST00000575560 KLK2P20151 261 aa9.35□□□□□ -0.91
CALCOCO2-227ENST00000575560 CHRM3P20309 590 aa9.35□□□□□ -0.91
CALCOCO2-227ENST00000575560 IL10P22301 178 aa9.35□□□□□ -0.91
CALCOCO2-227ENST00000575560 HRH2P25021 359 aa9.35□□□□□ -0.91
CALCOCO2-227ENST00000575560 NMBRP28336 390 aa9.35□□□□□ -0.91
CALCOCO2-227ENST00000575560 ANP32AP39687 249 aaKnown RBP9.35□□□□□ -0.91
CALCOCO2-227ENST00000575560 CYB561P49447 251 aa9.35□□□□□ -0.91
CALCOCO2-227ENST00000575560 HLCSP50747 726 aa9.35□□□□□ -0.91
CALCOCO2-227ENST00000575560 NAP1L1P55209 391 aaKnown RBP9.35□□□□□ -0.91
CALCOCO2-227ENST00000575560 MLF1P58340 268 aa9.35□□□□□ -0.91
CALCOCO2-227ENST00000575560 TAS2R50P59544 299 aa9.35□□□□□ -0.91
CALCOCO2-227ENST00000575560 RPS15AP62244 130 aaKnown RBP9.35□□□□□ -0.91
CALCOCO2-227ENST00000575560 CRADDP78560 199 aa9.35□□□□□ -0.91
CALCOCO2-227ENST00000575560 KCNJ11Q14654 390 aa9.35□□□□□ -0.91
CALCOCO2-227ENST00000575560 TYSND1Q2T9J0 566 aa9.35□□□□□ -0.91
CALCOCO2-227ENST00000575560 CMPK2Q5EBM0 449 aa9.35□□□□□ -0.91
CALCOCO2-227ENST00000575560 EMC4Q5J8M3 183 aa9.35□□□□□ -0.91
CALCOCO2-227ENST00000575560 ADCK2Q7Z695 626 aa9.35□□□□□ -0.91
CALCOCO2-227ENST00000575560 TMEM200AQ86VY9 491 aa9.35□□□□□ -0.91
CALCOCO2-227ENST00000575560 SULF2Q8IWU5 870 aa9.35□□□□□ -0.91
CALCOCO2-227ENST00000575560 REXO1L1PQ8IX06 675 aa9.35□□□□□ -0.91
CALCOCO2-227ENST00000575560 ARMC10Q8N2F6 343 aa9.35□□□□□ -0.91
CALCOCO2-227ENST00000575560 KIF2BQ8N4N8 673 aa9.35□□□□□ -0.91
CALCOCO2-227ENST00000575560 KCT2Q8NC54 265 aa9.35□□□□□ -0.91
CALCOCO2-227ENST00000575560 CHDHQ8NE62 594 aaPredicted RBP9.35□□□□□ -0.91
CALCOCO2-227ENST00000575560 ASB11Q8WXH4 323 aa9.35□□□□□ -0.91
CALCOCO2-227ENST00000575560 ATG4AQ8WYN0 398 aa9.35□□□□□ -0.91
CALCOCO2-227ENST00000575560 RND1Q92730 232 aa9.35□□□□□ -0.91
CALCOCO2-227ENST00000575560 NINJ1Q92982 152 aa9.35□□□□□ -0.91
CALCOCO2-227ENST00000575560 THAP11Q96EK4 314 aa9.35□□□□□ -0.91
CALCOCO2-227ENST00000575560 CCDC138Q96M89 665 aa9.35□□□□□ -0.91
CALCOCO2-227ENST00000575560 OR1F2PQ96R84 312 aa9.35□□□□□ -0.91
CALCOCO2-227ENST00000575560 TCF12Q99081 682 aa9.35□□□□□ -0.91
CALCOCO2-227ENST00000575560 LACRTQ9GZZ8 138 aa9.35□□□□□ -0.91
CALCOCO2-227ENST00000575560 RAB6BQ9NRW1 208 aa9.35□□□□□ -0.91
CALCOCO2-227ENST00000575560 EPN1Q9Y6I3 576 aaPredicted RBP9.35□□□□□ -0.91
CALCOCO2-227ENST00000575560 ABCA4P78363 2273 aa9.34□□□□□ -0.91
CALCOCO2-227ENST00000575560 A0A1B0GTL3 188 aa9.34□□□□□ -0.91
CALCOCO2-227ENST00000575560 FEZF1A0PJY2 475 aa9.34□□□□□ -0.91
CALCOCO2-227ENST00000575560 TFECO14948 347 aaPredicted RBP9.34□□□□□ -0.91
CALCOCO2-227ENST00000575560 LIASO43766 372 aa9.34□□□□□ -0.91
CALCOCO2-227ENST00000575560 HS6ST1O60243 411 aa9.34□□□□□ -0.91
CALCOCO2-227ENST00000575560 LCMT2O60294 686 aaKnown RBP9.34□□□□□ -0.91
CALCOCO2-227ENST00000575560 RDH16O75452 317 aa9.34□□□□□ -0.91
CALCOCO2-227ENST00000575560 CDC123O75794 336 aaPredicted RBP9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms