RNA–Protein interactions for RNA: ENST00000574428.5

ATPAF1-213, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 1 (best) BASIC

Gene ATPAF1, Length 1,760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-213ENST00000574428 ATXN7L1Q9ULK2 861 aaPredicted RBP23.01■■□□□ 1.27
ATPAF1-213ENST00000574428 RP1P56715 2156 aa23■■□□□ 1.27
ATPAF1-213ENST00000574428 IGHV5-51A0A0C4DH38 117 aa23■■□□□ 1.27
ATPAF1-213ENST00000574428 A0A1W2PQM1 296 aa23■■□□□ 1.27
ATPAF1-213ENST00000574428 C4orf47A7E2U8 309 aa23■■□□□ 1.27
ATPAF1-213ENST00000574428 SERPIND1P05546 499 aa23■■□□□ 1.27
ATPAF1-213ENST00000574428 HSD3B1P14060 373 aa23■■□□□ 1.27
ATPAF1-213ENST00000574428 LBPP18428 481 aa23■■□□□ 1.27
ATPAF1-213ENST00000574428 NCF2P19878 526 aaPredicted RBP23■■□□□ 1.27
ATPAF1-213ENST00000574428 HSD3B2P26439 372 aa23■■□□□ 1.27
ATPAF1-213ENST00000574428 RPS15AP62244 130 aaKnown RBP23■■□□□ 1.27
ATPAF1-213ENST00000574428 AP5B1Q2VPB7 878 aa23■■□□□ 1.27
ATPAF1-213ENST00000574428 WDR74Q6RFH5 385 aaPredicted RBP23■■□□□ 1.27
ATPAF1-213ENST00000574428 FITM2Q8N6M3 262 aa23■■□□□ 1.27
ATPAF1-213ENST00000574428 PPP3R2Q96LZ3 170 aa23■■□□□ 1.27
ATPAF1-213ENST00000574428 CATSPER2Q96P56 530 aa23■■□□□ 1.27
ATPAF1-213ENST00000574428 CD180Q99467 661 aa23■■□□□ 1.27
ATPAF1-213ENST00000574428 C1orf50Q9BV19 199 aa23■■□□□ 1.27
ATPAF1-213ENST00000574428 OR51B5Q9H339 312 aa23■■□□□ 1.27
ATPAF1-213ENST00000574428 LRTM1Q9HBL6 345 aa23■■□□□ 1.27
ATPAF1-213ENST00000574428 ZFP69BQ9UJL9 534 aa23■■□□□ 1.27
ATPAF1-213ENST00000574428 PILRAQ9UKJ1 303 aa23■■□□□ 1.27
ATPAF1-213ENST00000574428 MN1Q10571 1320 aaPredicted RBP23■■□□□ 1.27
ATPAF1-213ENST00000574428 A0A0J9YVX5 310 aa22.99■■□□□ 1.27
ATPAF1-213ENST00000574428 FCHO1O14526 889 aa22.99■■□□□ 1.27
ATPAF1-213ENST00000574428 GDF9O60383 454 aa22.99■■□□□ 1.27
ATPAF1-213ENST00000574428 RSL1D1O76021 490 aaKnown RBP22.99■■□□□ 1.27
ATPAF1-213ENST00000574428 TBX6O95947 436 aaPredicted RBP22.99■■□□□ 1.27
ATPAF1-213ENST00000574428 CKMT2P17540 419 aa22.99■■□□□ 1.27
ATPAF1-213ENST00000574428 SERPINB1P30740 379 aa22.99■■□□□ 1.27
ATPAF1-213ENST00000574428 SNAP47Q5SQN1 464 aa22.99■■□□□ 1.27
ATPAF1-213ENST00000574428 FNDC5Q8NAU1 212 aa22.99■■□□□ 1.27
ATPAF1-213ENST00000574428 MACROD1Q9BQ69 325 aa22.99■■□□□ 1.27
ATPAF1-213ENST00000574428 FAM60AQ9NP50 221 aa22.99■■□□□ 1.27
ATPAF1-213ENST00000574428 VPS29Q9UBQ0 182 aa22.99■■□□□ 1.27
ATPAF1-213ENST00000574428 ADGRE2Q9UHX3 823 aa22.99■■□□□ 1.27
ATPAF1-213ENST00000574428 TRIM33Q9UPN9 1127 aa22.99■■□□□ 1.27
ATPAF1-213ENST00000574428 AP1M2Q9Y6Q5 423 aa22.99■■□□□ 1.27
ATPAF1-213ENST00000574428 SAP18O00422 153 aaKnown RBP22.99■■□□□ 1.27
ATPAF1-213ENST00000574428 SEC22BO75396 215 aa22.99■■□□□ 1.27
ATPAF1-213ENST00000574428 DCTN3O75935 186 aa22.99■■□□□ 1.27
ATPAF1-213ENST00000574428 UBOX5O94941 541 aa22.99■■□□□ 1.27
ATPAF1-213ENST00000574428 C9P02748 559 aa22.99■■□□□ 1.27
ATPAF1-213ENST00000574428 ALDOCP09972 364 aaKnown RBP22.99■■□□□ 1.27
ATPAF1-213ENST00000574428 AHRP35869 848 aa22.99■■□□□ 1.27
ATPAF1-213ENST00000574428 RPL38P63173 70 aaKnown RBP22.99■■□□□ 1.27
ATPAF1-213ENST00000574428 RFTN2Q52LD8 501 aaPredicted RBP22.99■■□□□ 1.27
ATPAF1-213ENST00000574428 CACHD1Q5VU97 1274 aa22.99■■□□□ 1.27
ATPAF1-213ENST00000574428 TMPRSS9Q7Z410 1059 aa22.99■■□□□ 1.27
ATPAF1-213ENST00000574428 TTLQ8NG68 377 aa22.99■■□□□ 1.27
ATPAF1-213ENST00000574428 CREB3L4Q8TEY5 395 aa22.99■■□□□ 1.27
ATPAF1-213ENST00000574428 APIPQ96GX9 242 aa22.99■■□□□ 1.27
ATPAF1-213ENST00000574428 ZFYVE21Q9BQ24 234 aa22.99■■□□□ 1.27
ATPAF1-213ENST00000574428 MRPL1Q9BYD6 325 aaKnown RBP22.99■■□□□ 1.27
ATPAF1-213ENST00000574428 LRRN3Q9H3W5 708 aa22.99■■□□□ 1.27
ATPAF1-213ENST00000574428 C1orf109Q9NX04 203 aa22.99■■□□□ 1.27
ATPAF1-213ENST00000574428 COL5A1P20908 1838 aaPredicted RBP22.98■■□□□ 1.27
ATPAF1-213ENST00000574428 UBDO15205 165 aa22.98■■□□□ 1.27
ATPAF1-213ENST00000574428 UBAP2LQ14157 1087 aaKnown RBP22.98■■□□□ 1.27
ATPAF1-213ENST00000574428 METTL21CQ5VZV1 264 aa22.98■■□□□ 1.27
ATPAF1-213ENST00000574428 FRMPD2BQ6IN97 320 aa22.98■■□□□ 1.27
ATPAF1-213ENST00000574428 CHSY3Q70JA7 882 aa22.98■■□□□ 1.27
ATPAF1-213ENST00000574428 RNF44Q7L0R7 432 aa22.98■■□□□ 1.27
ATPAF1-213ENST00000574428 VN1R4Q7Z5H5 301 aa22.98■■□□□ 1.27
ATPAF1-213ENST00000574428 LRRC37BQ96QE4 947 aa22.98■■□□□ 1.27
ATPAF1-213ENST00000574428 OR2A5Q96R48 311 aa22.98■■□□□ 1.27
ATPAF1-213ENST00000574428 MS4A8Q9BY19 250 aa22.98■■□□□ 1.27
ATPAF1-213ENST00000574428 NDUFS4O43181 175 aa22.97■■□□□ 1.27
ATPAF1-213ENST00000574428 HCRTR1O43613 425 aa22.97■■□□□ 1.27
ATPAF1-213ENST00000574428 CLEC3AO75596 197 aa22.97■■□□□ 1.27
ATPAF1-213ENST00000574428 SERPINA6P08185 405 aa22.97■■□□□ 1.27
ATPAF1-213ENST00000574428 PRPH2P23942 346 aa22.97■■□□□ 1.27
ATPAF1-213ENST00000574428 ERVK-8P63133 956 aa22.97■■□□□ 1.27
ATPAF1-213ENST00000574428 DEFB110Q30KQ9 67 aa22.97■■□□□ 1.27
ATPAF1-213ENST00000574428 OGFOD2Q6N063 350 aa22.97■■□□□ 1.27
ATPAF1-213ENST00000574428 ZFAND4Q86XD8 727 aa22.97■■□□□ 1.27
ATPAF1-213ENST00000574428 CMTM7Q96FZ5 175 aa22.97■■□□□ 1.27
ATPAF1-213ENST00000574428 SERPINI1Q99574 410 aa22.97■■□□□ 1.27
ATPAF1-213ENST00000574428 ACTR5Q9H9F9 607 aaPredicted RBP22.97■■□□□ 1.27
ATPAF1-213ENST00000574428 SAR1AQ9NR31 198 aa22.97■■□□□ 1.27
ATPAF1-213ENST00000574428 SOHLH2Q9NX45 425 aa22.97■■□□□ 1.27
ATPAF1-213ENST00000574428 ARMCX1Q9P291 453 aa22.97■■□□□ 1.27
ATPAF1-213ENST00000574428 LOC105369274A0A096LPK9 316 aa22.96■■□□□ 1.27
ATPAF1-213ENST00000574428 LOC102723532A0A0G2JNH3 316 aa22.96■■□□□ 1.27
ATPAF1-213ENST00000574428 CCDC22O60826 627 aa22.96■■□□□ 1.27
ATPAF1-213ENST00000574428 CPNE6O95741 557 aa22.96■■□□□ 1.27
ATPAF1-213ENST00000574428 PTX3P26022 381 aaPredicted RBP22.96■■□□□ 1.27
ATPAF1-213ENST00000574428 RELAQ04206 551 aa22.96■■□□□ 1.27
ATPAF1-213ENST00000574428 SQSTM1Q13501 440 aa22.96■■□□□ 1.27
ATPAF1-213ENST00000574428 OR4N4Q8N0Y3 316 aa22.96■■□□□ 1.27
ATPAF1-213ENST00000574428 TRPV3Q8NET8 790 aa22.96■■□□□ 1.27
ATPAF1-213ENST00000574428 TCTN2Q96GX1 697 aa22.96■■□□□ 1.27
ATPAF1-213ENST00000574428 F2RL3Q96RI0 385 aa22.96■■□□□ 1.27
ATPAF1-213ENST00000574428 PHOX2BQ99453 314 aa22.96■■□□□ 1.27
ATPAF1-213ENST00000574428 MYLK2Q9H1R3 596 aa22.96■■□□□ 1.27
ATPAF1-213ENST00000574428 PPT2Q9UMR5 302 aa22.96■■□□□ 1.27
ATPAF1-213ENST00000574428 A8MU76 341 aa22.96■■□□□ 1.27
ATPAF1-213ENST00000574428 ACP1P24666 158 aa22.96■■□□□ 1.27
ATPAF1-213ENST00000574428 GSTM2P28161 218 aa22.96■■□□□ 1.27
ATPAF1-213ENST00000574428 HNRNPH1P31943 449 aaKnown RBP22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms