RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 SPATA6Q9NWH7 488 aaPredicted RBP18.39■□□□□ 0.53
SCARF1-206ENST00000573852 QPCTLQ9NXS2 382 aa18.39■□□□□ 0.53
SCARF1-206ENST00000573852 GPR83Q9NYM4 423 aa18.39■□□□□ 0.53
SCARF1-206ENST00000573852 NDUFAF4Q9P032 175 aa18.39■□□□□ 0.53
SCARF1-206ENST00000573852 CD84Q9UIB8 345 aa18.39■□□□□ 0.53
SCARF1-206ENST00000573852 THSD7BQ9C0I4 1608 aa18.39■□□□□ 0.53
SCARF1-206ENST00000573852 TNFRSF11BO00300 401 aa18.38■□□□□ 0.53
SCARF1-206ENST00000573852 SCAMP2O15127 329 aaKnown RBP18.38■□□□□ 0.53
SCARF1-206ENST00000573852 ETHE1O95571 254 aa18.38■□□□□ 0.53
SCARF1-206ENST00000573852 LATS1O95835 1130 aa18.38■□□□□ 0.53
SCARF1-206ENST00000573852 STSP08842 583 aa18.38■□□□□ 0.53
SCARF1-206ENST00000573852 MPC1LP0DKB6 136 aa18.38■□□□□ 0.53
SCARF1-206ENST00000573852 CYP2A7P20853 494 aa18.38■□□□□ 0.53
SCARF1-206ENST00000573852 MAGP20916 626 aa18.38■□□□□ 0.53
SCARF1-206ENST00000573852 GTF2E2P29084 291 aaKnown RBP18.38■□□□□ 0.53
SCARF1-206ENST00000573852 CD70P32970 193 aa18.38■□□□□ 0.53
SCARF1-206ENST00000573852 CRISP3P54108 245 aa18.38■□□□□ 0.53
SCARF1-206ENST00000573852 ACSM2AQ08AH3 577 aa18.38■□□□□ 0.53
SCARF1-206ENST00000573852 ZNF181Q2M3W8 571 aa18.38■□□□□ 0.53
SCARF1-206ENST00000573852 ZNF362Q5T0B9 420 aaPredicted RBP18.38■□□□□ 0.53
SCARF1-206ENST00000573852 ACSM2BQ68CK6 577 aa18.38■□□□□ 0.53
SCARF1-206ENST00000573852 TXNDC8Q6A555 127 aa18.38■□□□□ 0.53
SCARF1-206ENST00000573852 TUBA3EQ6PEY2 450 aa18.38■□□□□ 0.53
SCARF1-206ENST00000573852 SPPL2AQ8TCT8 520 aa18.38■□□□□ 0.53
SCARF1-206ENST00000573852 C11orf24Q96F05 449 aaPredicted RBP18.38■□□□□ 0.53
SCARF1-206ENST00000573852 TRMT2BQ96GJ1 504 aaKnown RBP18.38■□□□□ 0.53
SCARF1-206ENST00000573852 OR51E2Q9H255 320 aa18.38■□□□□ 0.53
SCARF1-206ENST00000573852 SPASTQ9UBP0 616 aa18.38■□□□□ 0.53
SCARF1-206ENST00000573852 RUVBL1Q9Y265 456 aaKnown RBP18.38■□□□□ 0.53
SCARF1-206ENST00000573852 TSC22D4Q9Y3Q8 395 aa18.38■□□□□ 0.53
SCARF1-206ENST00000573852 BACE2Q9Y5Z0 518 aa18.38■□□□□ 0.53
SCARF1-206ENST00000573852 LOC100506127A0A0U1RQW1 187 aa18.38■□□□□ 0.53
SCARF1-206ENST00000573852 A8MU76 341 aa18.38■□□□□ 0.53
SCARF1-206ENST00000573852 PCDH7O60245 1069 aa18.38■□□□□ 0.53
SCARF1-206ENST00000573852 OXSR1O95747 527 aaPredicted RBP18.38■□□□□ 0.53
SCARF1-206ENST00000573852 OPN1SWP03999 348 aa18.38■□□□□ 0.53
SCARF1-206ENST00000573852 CTSOP43234 321 aaPredicted RBP18.38■□□□□ 0.53
SCARF1-206ENST00000573852 CASP9P55211 416 aa18.38■□□□□ 0.53
SCARF1-206ENST00000573852 RAE1P78406 368 aaKnown RBP18.38■□□□□ 0.53
SCARF1-206ENST00000573852 PPIGQ13427 754 aaKnown RBP eCLIP18.38■□□□□ 0.53
SCARF1-206ENST00000573852 TPRG1LQ5T0D9 272 aa18.38■□□□□ 0.53
SCARF1-206ENST00000573852 MLIPQ5VWP3 458 aa18.38■□□□□ 0.53
SCARF1-206ENST00000573852 LIPJQ5W064 366 aa18.38■□□□□ 0.53
SCARF1-206ENST00000573852 OR52J3Q8NH60 311 aa18.38■□□□□ 0.53
SCARF1-206ENST00000573852 ZNF675Q8TD23 568 aa18.38■□□□□ 0.53
SCARF1-206ENST00000573852 STARD8Q92502 1023 aa18.38■□□□□ 0.53
SCARF1-206ENST00000573852 NXF2Q9GZY0 626 aaKnown RBP18.38■□□□□ 0.53
SCARF1-206ENST00000573852 ZNF226Q9NYT6 803 aa18.38■□□□□ 0.53
SCARF1-206ENST00000573852 E7EQ34 232 aa18.37■□□□□ 0.53
SCARF1-206ENST00000573852 TLL1O43897 1013 aa18.37■□□□□ 0.53
SCARF1-206ENST00000573852 ABLIM3O94929 683 aa18.37■□□□□ 0.53
SCARF1-206ENST00000573852 SELPP16109 830 aa18.37■□□□□ 0.53
SCARF1-206ENST00000573852 IDH2P48735 452 aaKnown RBP18.37■□□□□ 0.53
SCARF1-206ENST00000573852 C21orf58P58505 322 aa18.37■□□□□ 0.53
SCARF1-206ENST00000573852 DOC2AQ14183 400 aa18.37■□□□□ 0.53
SCARF1-206ENST00000573852 ATAD3BQ5T9A4 648 aa18.37■□□□□ 0.53
SCARF1-206ENST00000573852 CPTPQ5TA50 214 aa18.37■□□□□ 0.53
SCARF1-206ENST00000573852 RGMBQ6NW40 437 aa18.37■□□□□ 0.53
SCARF1-206ENST00000573852 DNAJB7Q7Z6W7 309 aaPredicted RBP18.37■□□□□ 0.53
SCARF1-206ENST00000573852 CRIPAKQ8N1N5 446 aa18.37■□□□□ 0.53
SCARF1-206ENST00000573852 UGT2A1Q9Y4X1 527 aa18.37■□□□□ 0.53
SCARF1-206ENST00000573852 PCDHGA2Q9Y5H1 932 aa18.37■□□□□ 0.53
SCARF1-206ENST00000573852 SAGE2PA6NJ88 616 aa18.37■□□□□ 0.53
SCARF1-206ENST00000573852 C1SP09871 688 aa18.37■□□□□ 0.53
SCARF1-206ENST00000573852 ATP1B2P14415 290 aaPredicted RBP18.37■□□□□ 0.53
SCARF1-206ENST00000573852 HKDC1Q2TB90 917 aa18.37■□□□□ 0.53
SCARF1-206ENST00000573852 KIAA1841Q6NSI8 718 aa18.37■□□□□ 0.53
SCARF1-206ENST00000573852 ZIC5Q96T25 663 aa18.37■□□□□ 0.53
SCARF1-206ENST00000573852 CORO1BQ9BR76 489 aa18.37■□□□□ 0.53
SCARF1-206ENST00000573852 ABCB8Q9NUT2 735 aa18.37■□□□□ 0.53
SCARF1-206ENST00000573852 FAM8A1Q9UBU6 413 aa18.37■□□□□ 0.53
SCARF1-206ENST00000573852 CASP8AP2Q9UKL3 1982 aa18.37■□□□□ 0.53
SCARF1-206ENST00000573852 M0R129 80 aa18.36■□□□□ 0.53
SCARF1-206ENST00000573852 DLGAP3O95886 979 aa18.36■□□□□ 0.53
SCARF1-206ENST00000573852 EFEMP2O95967 443 aa18.36■□□□□ 0.53
SCARF1-206ENST00000573852 PTHP01270 115 aa18.36■□□□□ 0.53
SCARF1-206ENST00000573852 RPLP0P05388 317 aaKnown RBP18.36■□□□□ 0.53
SCARF1-206ENST00000573852 HLA-EP13747 358 aa18.36■□□□□ 0.53
SCARF1-206ENST00000573852 PCGF2P35227 344 aa18.36■□□□□ 0.53
SCARF1-206ENST00000573852 OR1E2P47887 323 aa18.36■□□□□ 0.53
SCARF1-206ENST00000573852 PXNP49023 591 aaPredicted RBP18.36■□□□□ 0.53
SCARF1-206ENST00000573852 AP1S2P56377 157 aa18.36■□□□□ 0.53
SCARF1-206ENST00000573852 SELENOWP63302 87 aa18.36■□□□□ 0.53
SCARF1-206ENST00000573852 SP140Q13342 867 aa18.36■□□□□ 0.53
SCARF1-206ENST00000573852 THOC6Q86W42 341 aaKnown RBP18.36■□□□□ 0.53
SCARF1-206ENST00000573852 PARP16Q8N5Y8 322 aa18.36■□□□□ 0.53
SCARF1-206ENST00000573852 C1orf52Q8N6N3 182 aaKnown RBP18.36■□□□□ 0.53
SCARF1-206ENST00000573852 AMER2Q8N7J2 671 aa18.36■□□□□ 0.53
SCARF1-206ENST00000573852 OR10G2Q8NGC3 310 aa18.36■□□□□ 0.53
SCARF1-206ENST00000573852 TXNDC15Q96J42 360 aa18.36■□□□□ 0.53
SCARF1-206ENST00000573852 NIPSNAP1Q9BPW8 284 aa18.36■□□□□ 0.53
SCARF1-206ENST00000573852 CENPOQ9BU64 300 aa18.36■□□□□ 0.53
SCARF1-206ENST00000573852 SPATA9Q9BWV2 254 aa18.36■□□□□ 0.53
SCARF1-206ENST00000573852 ZNF334Q9HCZ1 680 aaPredicted RBP18.36■□□□□ 0.53
SCARF1-206ENST00000573852 RAPGEFL1Q9UHV5 662 aa18.36■□□□□ 0.53
SCARF1-206ENST00000573852 BTNL2Q9UIR0 455 aa18.36■□□□□ 0.53
SCARF1-206ENST00000573852 ATP11BQ9Y2G3 1177 aa18.36■□□□□ 0.53
SCARF1-206ENST00000573852 SLC16A5O15375 505 aa18.36■□□□□ 0.53
SCARF1-206ENST00000573852 CA12O43570 354 aa18.36■□□□□ 0.53
SCARF1-206ENST00000573852 ABCB1P08183 1280 aaPredicted RBP18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms